From owner-freebsd-ports-bugs Wed Jan 22 6:10: 8 2003 Delivered-To: freebsd-ports-bugs@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 9692D37B401; Wed, 22 Jan 2003 06:10:06 -0800 (PST) Received: from mailout02.sul.t-online.com (mailout02.sul.t-online.com [194.25.134.17]) by mx1.FreeBSD.org (Postfix) with ESMTP id 82E2643F1E; Wed, 22 Jan 2003 06:10:05 -0800 (PST) (envelope-from corecode@corecode.ath.cx) Received: from fwd04.sul.t-online.de by mailout02.sul.t-online.com with smtp id 18bLZr-0007MX-0F; Wed, 22 Jan 2003 15:10:03 +0100 Received: from pride.uni.stoert.net (320050403952-0001@[217.82.48.233]) by fmrl04.sul.t-online.com with esmtp id 18bLZm-187CAyC; Wed, 22 Jan 2003 15:09:58 +0100 Received: from terrorfish.uni.stoert.net (terrorfish.uni.stoert.net [10.150.180.178]) by pride.uni.stoert.net (Postfix) with ESMTP id 221FE135084; Wed, 22 Jan 2003 15:09:58 +0100 (CET) Received: from terrorfish.uni.stoert.net (localhost [127.0.0.1]) by terrorfish.uni.stoert.net (8.12.6/8.12.6) with ESMTP id h0MEAgKF001767; Wed, 22 Jan 2003 15:10:42 +0100 (CET) (envelope-from corecode@terrorfish.uni.stoert.net) Received: (from corecode@localhost) by terrorfish.uni.stoert.net (8.12.6/8.12.6/Submit) id h0MEAPjv001757; Wed, 22 Jan 2003 15:10:25 +0100 (CET) Date: Wed, 22 Jan 2003 15:10:20 +0100 From: "Simon 'corecode' Schubert" To: Fernan Aguero Cc: FreeBSD-gnats-submit@FreeBSD.org, freebsd-ports-bugs@FreeBSD.org Subject: Re: ports/47303: Update biology/p5-bioperl to latest release Message-Id: <20030122151020.6b099a69.corecode@corecode.ath.cx> In-Reply-To: <20030122130824.GA35269@iib.unsam.edu.ar> References: <200301211709.h0LH91XB031148@pi.iib.unsam.edu.ar> <200301211710.h0LHA2Wr051373@freefall.freebsd.org> <20030122130824.GA35269@iib.unsam.edu.ar> X-Mailer: Sylpheed version 0.8.8claws (GTK+ 1.2.10; i386-portbld-freebsd5.0) Mime-Version: 1.0 Content-Type: multipart/signed; protocol="application/pgp-signature"; micalg="pgp-sha1"; boundary="=.eEv)v2aQFD:_M1" X-Sender: 320050403952-0001@t-dialin.net Sender: owner-freebsd-ports-bugs@FreeBSD.ORG Precedence: bulk List-ID: List-Archive: (Web Archive) List-Help: (List Instructions) List-Subscribe: List-Unsubscribe: X-Loop: FreeBSD.org --=.eEv)v2aQFD:_M1 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Lately Fernan Aguero told: > diff -ruN p5-bioperl.new/Makefile p5-bioperl/Makefile > --- p5-bioperl.new/Makefile Wed Jan 22 10:01:22 2003 > +++ p5-bioperl/Makefile Fri Jan 25 08:46:09 2002 woo! reverse diff is hard to read, but here we go: [...] > -MASTER_SITES= ftp://bioperl.org/pub/DIST/ \ > - http://bioperl.org/DIST \ ^ add / [...] > -DISTFILES= ${DISTNAME}${EXTRACT_SUFX} is that needed? [...] > # These are all run-time dependencies, but listing them in ${BUILD_DEPENDS} > # prevents a flood of build-time warnings. > -# > -# Text::Shellwords does not appear to be in the ports tree > -# and is required by Bio::Graphics:FeatureFile.pm > -# > -# DB_File is required to access Berkeley DB > -# by Bio::DB::Flat and Bio::SeqFeature::Collection > -# but is not in the ports tree > -# > -# perhaps they're included with perl? > -# let me know if they are is this optional or mandatory? if so they need to be ported [...] > -.for doc in AUTHORS BUGS Changes DEPRECATED FAQ INSTALL LICENSE PLATFORMS README > - ${INSTALL_MAN} ${WRKSRC}/${doc} ${DOCSDIR} better use ${INSTALL_DATA}? cheers simon -- /"\ http://corecode.ath.cx/#donate \ / \ ASCII Ribbon Campaign / \ Against HTML Mail and News --=.eEv)v2aQFD:_M1 Content-Type: application/pgp-signature -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.1 (FreeBSD) iD8DBQE+LqZRr5S+dk6z85oRAvgfAKCnQnwjQ/LPEaEOHf8AUJ1pXampEwCfbsmR ZEzxKX01dgh1D0NK0APS/eQ= =hbxa -----END PGP SIGNATURE----- --=.eEv)v2aQFD:_M1-- To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-ports-bugs" in the body of the message