From owner-freebsd-ports-bugs@FreeBSD.ORG Thu Oct 25 18:00:04 2007 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 4604616A421 for ; Thu, 25 Oct 2007 18:00:04 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id 1CAA813C481 for ; Thu, 25 Oct 2007 18:00:04 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (gnats@localhost [127.0.0.1]) by freefall.freebsd.org (8.14.1/8.14.1) with ESMTP id l9PI04O6052805 for ; Thu, 25 Oct 2007 18:00:04 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.1/8.14.1/Submit) id l9PI04Qw052804; Thu, 25 Oct 2007 18:00:04 GMT (envelope-from gnats) Resent-Date: Thu, 25 Oct 2007 18:00:04 GMT Resent-Message-Id: <200710251800.l9PI04Qw052804@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Sunpoet Po-Chuan Hsieh Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id CC4B916A417 for ; Thu, 25 Oct 2007 17:59:47 +0000 (UTC) (envelope-from sunpoet@sunpoet.net) Received: from sunpoet.net (sunpoet.net [203.204.205.212]) by mx1.freebsd.org (Postfix) with ESMTP id 6659D13C4A5 for ; Thu, 25 Oct 2007 17:59:47 +0000 (UTC) (envelope-from sunpoet@sunpoet.net) Received: by sunpoet.net (Postfix, from userid 1000) id A2D551708E; Fri, 26 Oct 2007 00:52:11 +0800 (CST) Message-Id: <20071025180046.A2D551708E@sunpoet.net> Date: Fri, 26 Oct 2007 00:52:11 +0800 (CST) From: Sunpoet Po-Chuan Hsieh To: FreeBSD-gnats-submit@FreeBSD.org X-Send-Pr-Version: 3.113 Cc: Subject: ports/117506: Update science/cdo to latest version X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list Reply-To: Sunpoet Po-Chuan Hsieh List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 25 Oct 2007 18:00:04 -0000 >Number: 117506 >Category: ports >Synopsis: Update science/cdo to latest version >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Thu Oct 25 18:00:03 UTC 2007 >Closed-Date: >Last-Modified: >Originator: Sunpoet Po-Chuan Hsieh >Release: FreeBSD 6.2-STABLE i386 >Organization: SUNPOET.net >Environment: System: FreeBSD IRIS.sunpoet.net 6.2-STABLE FreeBSD 6.2-STABLE #9: Tue Oct 2 02:44:06 CST 2007 sunpoet@IRIS.sunpoet.net:/usr/obj/usr/src/sys/sunpoet i386 >Description: Update CDO to latest version (1.0.9). >How-To-Repeat: >Fix: diff -ruN --exclude=CVS /usr/ports/science/cdo/Makefile /usr/ports/sunpoet/cdo/Makefile --- /usr/ports/science/cdo/Makefile 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/Makefile 2007-10-25 16:30:22.000000000 +0800 @@ -7,7 +7,7 @@ # PORTNAME= cdo -PORTVERSION= 1.0.8 +PORTVERSION= 1.0.9 CATEGORIES= science MASTER_SITES= http://www.mpimet.mpg.de/fileadmin/software/cdo/ \ http://sunpoet.net/distfiles/ diff -ruN --exclude=CVS /usr/ports/science/cdo/distinfo /usr/ports/sunpoet/cdo/distinfo --- /usr/ports/science/cdo/distinfo 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/distinfo 2007-10-25 16:30:30.000000000 +0800 @@ -1,3 +1,3 @@ -MD5 (cdo-1.0.8.tar.gz) = 7d6a10374ee844df5882a8c9b3c16feb -SHA256 (cdo-1.0.8.tar.gz) = 5796a6639f128b3d255cdd65dbfeb91a66c5478a37b7e05bc2d8f9573480a6b4 -SIZE (cdo-1.0.8.tar.gz) = 2372654 +MD5 (cdo-1.0.9.tar.gz) = daec09bb72336a6838f624d56bc57beb +SHA256 (cdo-1.0.9.tar.gz) = 2d9df55c50caa7e7a8d8245c772b2242b79c4e770c272f78dcf9ba95b380946f +SIZE (cdo-1.0.9.tar.gz) = 2383922 diff -ruN --exclude=CVS /usr/ports/science/cdo/files/patch-src-cdo_pthread.c /usr/ports/sunpoet/cdo/files/patch-src-cdo_pthread.c --- /usr/ports/science/cdo/files/patch-src-cdo_pthread.c 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/files/patch-src-cdo_pthread.c 2007-10-26 00:32:12.000000000 +0800 @@ -1,5 +1,5 @@ ---- src/cdo_pthread.c.orig Wed Mar 22 22:04:18 2006 -+++ src/cdo_pthread.c Fri Jun 29 00:18:34 2007 +--- src/cdo_pthread.c.orig 2007-08-29 17:15:32.000000000 +0800 ++++ src/cdo_pthread.c 2007-10-25 16:30:35.000000000 +0800 @@ -32,8 +32,10 @@ { #if defined (HAVE_LIBPTHREAD) diff -ruN --exclude=CVS /usr/ports/science/cdo/files/patch-src-config.h.in /usr/ports/sunpoet/cdo/files/patch-src-config.h.in --- /usr/ports/science/cdo/files/patch-src-config.h.in 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/files/patch-src-config.h.in 2007-10-26 00:35:59.000000000 +0800 @@ -1,10 +0,0 @@ ---- src/config.h.in.orig Wed Apr 18 16:24:45 2007 -+++ src/config.h.in Fri Jun 29 00:18:34 2007 -@@ -107,3 +107,7 @@ - - /* Define for large files, on AIX-style hosts. */ - #undef _LARGE_FILES -+ -+#if defined (HAVE_UNISTD_H) -+#include -+#endif diff -ruN --exclude=CVS /usr/ports/science/cdo/files/patch-src-pthread_debug.c /usr/ports/sunpoet/cdo/files/patch-src-pthread_debug.c --- /usr/ports/science/cdo/files/patch-src-pthread_debug.c 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/files/patch-src-pthread_debug.c 2007-10-26 00:36:28.000000000 +0800 @@ -1,5 +1,5 @@ ---- src/pthread_debug.c.orig Mon May 14 14:30:15 2007 -+++ src/pthread_debug.c Fri Jun 29 00:24:12 2007 +--- src/pthread_debug.c.orig 2007-05-14 14:30:15.000000000 +0800 ++++ src/pthread_debug.c 2007-10-25 16:30:35.000000000 +0800 @@ -77,6 +77,7 @@ } diff -ruN --exclude=CVS /usr/ports/science/cdo/files/patch-src-pthread_debug.h /usr/ports/sunpoet/cdo/files/patch-src-pthread_debug.h --- /usr/ports/science/cdo/files/patch-src-pthread_debug.h 2007-06-29 16:45:19.000000000 +0800 +++ /usr/ports/sunpoet/cdo/files/patch-src-pthread_debug.h 2007-10-26 00:36:48.000000000 +0800 @@ -1,5 +1,5 @@ ---- src/pthread_debug.h.orig Wed Feb 15 21:22:38 2006 -+++ src/pthread_debug.h Fri Jun 29 00:18:34 2007 +--- src/pthread_debug.h.orig 2006-02-15 21:22:38.000000000 +0800 ++++ src/pthread_debug.h 2007-10-25 16:30:35.000000000 +0800 @@ -15,8 +15,10 @@ void Pthread_cond_wait(const char *caller, pthread_cond_t *cond, pthread_mutex_t *mutex); >Release-Note: >Audit-Trail: >Unformatted: