From owner-freebsd-ports-bugs@FreeBSD.ORG Sun Apr 20 10:40:01 2014 Return-Path: Delivered-To: freebsd-ports-bugs@smarthost.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 422BDBCD for ; Sun, 20 Apr 2014 10:40:01 +0000 (UTC) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:1900:2254:206c::16:87]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 1D83811E7 for ; Sun, 20 Apr 2014 10:40:01 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.8/8.14.8) with ESMTP id s3KAe0R0088626 for ; Sun, 20 Apr 2014 10:40:00 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.8/8.14.8/Submit) id s3KAe0GM088625; Sun, 20 Apr 2014 10:40:00 GMT (envelope-from gnats) Resent-Date: Sun, 20 Apr 2014 10:40:00 GMT Resent-Message-Id: <201404201040.s3KAe0GM088625@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, Bartek Rutkowski Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id 6BE90947; Sun, 20 Apr 2014 10:32:33 +0000 (UTC) Received: from poudriere.ithil.palantiri.org (ithil.palantiri.org [144.76.36.55]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "0254-fbsd-10-amd64", Issuer "0254-fbsd-10-amd64" (not verified)) by mx1.freebsd.org (Postfix) with ESMTPS id ECFEA11BA; Sun, 20 Apr 2014 10:32:32 +0000 (UTC) Received: from poudriere.ithil.palantiri.org (localhost [127.0.0.1]) by poudriere.ithil.palantiri.org (8.14.8/8.14.8) with ESMTP id s3KAWUgP086533 (version=TLSv1/SSLv3 cipher=DHE-RSA-AES256-GCM-SHA384 bits=256 verify=NO); Sun, 20 Apr 2014 12:32:30 +0200 (CEST) (envelope-from root@poudriere.ithil.palantiri.org) Received: (from root@localhost) by poudriere.ithil.palantiri.org (8.14.8/8.14.8/Submit) id s3KAWUFk086532; Sun, 20 Apr 2014 12:32:30 +0200 (CEST) (envelope-from root) Message-Id: <201404201032.s3KAWUFk086532@poudriere.ithil.palantiri.org> Date: Sun, 20 Apr 2014 12:32:30 +0200 (CEST) From: Bartek Rutkowski To: FreeBSD-gnats-submit@freebsd.org X-Send-Pr-Version: 3.113 Subject: ports/188819: [PATCH] biology/pycogent: stage Cc: wen@FreeBSD.org X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.17 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 20 Apr 2014 10:40:01 -0000 >Number: 188819 >Category: ports >Synopsis: [PATCH] biology/pycogent: stage >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Sun Apr 20 10:40:00 UTC 2014 >Closed-Date: >Last-Modified: >Originator: Bartek Rutkowski >Release: FreeBSD 11.0-CURRENT amd64 >Organization: Pixeware LTD >Environment: System: FreeBSD poudriere.ithil.palantiri.org 11.0-CURRENT FreeBSD 11.0-CURRENT #0 r264341: Fri Apr 11 15:28:07 CEST >Description: - Stage - Pet portlint http://poudriere.ithil.palantiri.org:8080/latest-per-pkg/pycogent/1.5.3_2/ Port maintainer (wen@FreeBSD.org) is cc'd. Generated with FreeBSD Port Tools 1.00.2014.03.23 (mode: change, diff: SVN) >How-To-Repeat: >Fix: --- pycogent-1.5.3.patch begins here --- Index: Makefile =================================================================== --- Makefile (revision 351617) +++ Makefile (working copy) @@ -10,7 +10,7 @@ EXTRACT_SUFX= .tgz MAINTAINER= wen@FreeBSD.org -COMMENT= A toolkit for statistical analysis of biological sequences +COMMENT= Toolkit for statistical analysis of biological sequences BUILD_DEPENDS= ${PYNUMPY} \ ${LOCALBASE}/bin/cython:${PORTSDIR}/lang/cython \ @@ -22,5 +22,4 @@ USE_PYDISTUTILS= yes PYDISTUTILS_PKGNAME= cogent -NO_STAGE= yes .include Index: pkg-descr =================================================================== --- pkg-descr (revision 351617) +++ pkg-descr (working copy) @@ -6,4 +6,4 @@ true codon alignment) and the frequent addition of entirely new methods for the analysis of genomic data. -WWW: http://pycogent.sourceforge.net/ +WWW: http://pycogent.sourceforge.net/ --- pycogent-1.5.3.patch ends here --- >Release-Note: >Audit-Trail: >Unformatted: