From owner-freebsd-cluster@FreeBSD.ORG Tue Mar 8 03:11:16 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id B728D16A4CF for ; Tue, 8 Mar 2005 03:11:16 +0000 (GMT) Received: from web41314.mail.yahoo.com (web41314.mail.yahoo.com [66.218.93.63]) by mx1.FreeBSD.org (Postfix) with SMTP id 4E1F443D53 for ; Tue, 8 Mar 2005 03:11:16 +0000 (GMT) (envelope-from ron_chen_123@yahoo.com) Received: (qmail 42243 invoked by uid 60001); 8 Mar 2005 03:11:16 -0000 Comment: DomainKeys? See http://antispam.yahoo.com/domainkeys DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=s1024; d=yahoo.com; b=XXYmwARp4HHX26xjqeZlAI4KTHqxQVAmUUfpvIwka/ykXJZqHRXKq0f5xG/DMsmnWw/ZolAWmC+6ayLCRgNzVY8xcBptZ/ptf2o8kPYWmK/79SzVl7hsfjCWdNwt+4vZ9WKoFx4hwqTpKfomMkatXQt9tjtAF3YXtKXEMqwDRA0= ; Message-ID: <20050308031115.42240.qmail@web41314.mail.yahoo.com> Received: from [199.246.40.54] by web41314.mail.yahoo.com via HTTP; Mon, 07 Mar 2005 19:11:15 PST Date: Mon, 7 Mar 2005 19:11:15 -0800 (PST) From: Ron Chen To: freebsd-cluster@freebsd.org, freebsd-hackers@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii Subject: Failed to compile Gridengine 6.0u3 on FreeBSD X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 08 Mar 2005 03:11:16 -0000 I just got access to a FreeBSD 5.3 box, and I find that Gridengine (SGE) fails to compile. (SGE 5.3p6 was OK on FreeBSD 4.x/5.x) I find that it is caused by pthread_t is undefined. For Linux, "sys/types.h" includes "bits/pthreadtypes.h", and thus it's OK - and other OSes are similar too. So I am wondering if it is a bug in FreeBSD, or if Gridengine really needs to include pthread.h to get pthread_t. BTW, for people interested, Gridengine is an opensource batch/cluster scheduler. For more info: http://gridengine.sunsource.net -Ron __________________________________ Celebrate Yahoo!'s 10th Birthday! Yahoo! Netrospective: 100 Moments of the Web http://birthday.yahoo.com/netrospective/ From owner-freebsd-cluster@FreeBSD.ORG Tue Mar 8 14:58:55 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 1D12616A4CE; Tue, 8 Mar 2005 14:58:55 +0000 (GMT) Received: from odin.ac.hmc.edu (Odin.AC.HMC.Edu [134.173.32.75]) by mx1.FreeBSD.org (Postfix) with ESMTP id B7B2943D53; Tue, 8 Mar 2005 14:58:54 +0000 (GMT) (envelope-from brdavis@odin.ac.hmc.edu) Received: from odin.ac.hmc.edu (localhost.localdomain [127.0.0.1]) by odin.ac.hmc.edu (8.13.0/8.13.0) with ESMTP id j28Ews4l007021; Tue, 8 Mar 2005 06:58:54 -0800 Received: (from brdavis@localhost) by odin.ac.hmc.edu (8.13.0/8.13.0/Submit) id j28Ewsww007020; Tue, 8 Mar 2005 06:58:54 -0800 Date: Tue, 8 Mar 2005 06:58:54 -0800 From: Brooks Davis To: Ron Chen Message-ID: <20050308145854.GA31278@odin.ac.hmc.edu> References: <20050308031115.42240.qmail@web41314.mail.yahoo.com> Mime-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha1; protocol="application/pgp-signature"; boundary="YiEDa0DAkWCtVeE4" Content-Disposition: inline In-Reply-To: <20050308031115.42240.qmail@web41314.mail.yahoo.com> User-Agent: Mutt/1.4.1i X-Virus-Scanned: by amavisd-new X-Spam-Status: No, hits=0.0 required=8.0 tests=none autolearn=no version=2.63 X-Spam-Checker-Version: SpamAssassin 2.63 (2004-01-11) on odin.ac.hmc.edu cc: freebsd-hackers@freebsd.org cc: freebsd-cluster@freebsd.org Subject: Re: Failed to compile Gridengine 6.0u3 on FreeBSD X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 08 Mar 2005 14:58:55 -0000 --YiEDa0DAkWCtVeE4 Content-Type: text/plain; charset=us-ascii Content-Disposition: inline Content-Transfer-Encoding: quoted-printable On Mon, Mar 07, 2005 at 07:11:15PM -0800, Ron Chen wrote: > I just got access to a FreeBSD 5.3 box, and I find > that Gridengine (SGE) fails to compile. (SGE 5.3p6 was > OK on FreeBSD 4.x/5.x) >=20 > I find that it is caused by pthread_t is undefined. > For Linux, "sys/types.h" includes > "bits/pthreadtypes.h", and thus it's OK - and other > OSes are similar too. >=20 > So I am wondering if it is a bug in FreeBSD, or if > Gridengine really needs to include pthread.h to get > pthread_t. According to The Open Group Base Specifications Issue 6, this is indeed a bug. There should be no harm in also including pthread.h since that is also required to define pthread_t identicaly to sys/types.h. freebsd-threads is the appropriate place to raise this issue. -- Brooks --=20 Any statement of the form "X is the one, true Y" is FALSE. PGP fingerprint 655D 519C 26A7 82E7 2529 9BF0 5D8E 8BE9 F238 1AD4 --YiEDa0DAkWCtVeE4 Content-Type: application/pgp-signature Content-Disposition: inline -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.2.1 (GNU/Linux) iD8DBQFCLb2tXY6L6fI4GtQRAkrXAJ979WuUoHZ/HO2Sk68MDVL4OPkudACfVuAM ZspzgvVplT+jQS0EEdUfLdE= =5cJC -----END PGP SIGNATURE----- --YiEDa0DAkWCtVeE4-- From owner-freebsd-cluster@FreeBSD.ORG Tue Mar 8 19:11:47 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id B640816A4CF for ; Tue, 8 Mar 2005 19:11:47 +0000 (GMT) Received: from mail.telnix.com (office.telnix.com [70.58.179.73]) by mx1.FreeBSD.org (Postfix) with SMTP id E66FF43D5C for ; Tue, 8 Mar 2005 19:11:46 +0000 (GMT) (envelope-from sdsmith@telnix.com) Received: (qmail 66941 invoked from network); 8 Mar 2005 19:11:46 -0000 Received: from localhost (HELO mail.telnix.com) (127.0.0.1) by localhost with SMTP; 8 Mar 2005 19:11:46 -0000 Received: from 192.168.10.12 (SquirrelMail authenticated user sdsmith@telnix.com); by mail.telnix.com with HTTP; Tue, 8 Mar 2005 11:11:46 -0800 (PST) Message-ID: <2384.192.168.10.12.1110309106.squirrel@192.168.10.12> In-Reply-To: <20050308031115.42240.qmail@web41314.mail.yahoo.com> References: <20050308031115.42240.qmail@web41314.mail.yahoo.com> Date: Tue, 8 Mar 2005 11:11:46 -0800 (PST) From: "Scott D. Smith" To: "Ron Chen" User-Agent: SquirrelMail/1.4.3a X-Mailer: SquirrelMail/1.4.3a MIME-Version: 1.0 Content-Type: text/plain;charset=iso-8859-1 Content-Transfer-Encoding: 8bit X-Priority: 3 (Normal) Importance: Normal X-Spam-Rating: localhost 0/1/N cc: freebsd-hackers@freebsd.org cc: freebsd-cluster@freebsd.org Subject: Re: Failed to compile Gridengine 6.0u3 on FreeBSD X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list Reply-To: sdsmith@telnix.com List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 08 Mar 2005 19:11:48 -0000 SGE installed flawlessly from ports on my miriad of 5.3 systems, most of which are/were fresh clean installs. Checking what ports does to make it work should answer your question. On Mon, March 7, 2005 7:11 pm, Ron Chen said: > I just got access to a FreeBSD 5.3 box, and I find > that Gridengine (SGE) fails to compile. (SGE 5.3p6 was > OK on FreeBSD 4.x/5.x) > > I find that it is caused by pthread_t is undefined. > For Linux, "sys/types.h" includes > "bits/pthreadtypes.h", and thus it's OK - and other > OSes are similar too. > > So I am wondering if it is a bug in FreeBSD, or if > Gridengine really needs to include pthread.h to get > pthread_t. > > BTW, for people interested, Gridengine is an > opensource batch/cluster scheduler. For more info: > > http://gridengine.sunsource.net > > -Ron ------------------------------------------------ - Oregon Public Communications, Inc. - - www.oregonvoices.org - 1-866-485-3979 - ------------------------------------------------ - Telnix, Inc. - www.telnix.com - 541-485-3979 - ------------------------------------------------ - WE TRANSITION BUSINESS INTO THE FUTURE - ------------------------------------------------ From owner-freebsd-cluster@FreeBSD.ORG Tue Mar 8 21:05:13 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id CA0A516A4CE; Tue, 8 Mar 2005 21:05:13 +0000 (GMT) Received: from smtp-vbr13.xs4all.nl (smtp-vbr13.xs4all.nl [194.109.24.33]) by mx1.FreeBSD.org (Postfix) with ESMTP id CCC2143D54; Tue, 8 Mar 2005 21:05:12 +0000 (GMT) (envelope-from axel@axel.truedestiny.net) Received: from [10.0.10.10] (void-ptr.xs4all.nl [80.126.86.58]) j28L59Vh062142; Tue, 8 Mar 2005 22:05:10 +0100 (CET) (envelope-from axel@axel.truedestiny.net) Message-ID: <422E1384.2080107@axel.truedestiny.net> Date: Tue, 08 Mar 2005 22:05:08 +0100 From: "Axel Scheepers (@home)" User-Agent: Mozilla Thunderbird 0.6 (Windows/20040502) X-Accept-Language: en-us, en MIME-Version: 1.0 To: sdsmith@telnix.com References: <20050308031115.42240.qmail@web41314.mail.yahoo.com> <2384.192.168.10.12.1110309106.squirrel@192.168.10.12> In-Reply-To: <2384.192.168.10.12.1110309106.squirrel@192.168.10.12> Content-Type: text/plain; charset=us-ascii; format=flowed Content-Transfer-Encoding: 7bit X-Virus-Scanned: by XS4ALL Virus Scanner cc: freebsd-hackers@freebsd.org cc: Ron Chen cc: freebsd-cluster@freebsd.org Subject: Re: Failed to compile Gridengine 6.0u3 on FreeBSD X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 08 Mar 2005 21:05:13 -0000 Scott D. Smith wrote: >SGE installed flawlessly from ports on my miriad of 5.3 systems, most of >which are/were fresh clean installs. Checking what ports does to make it >work should answer your question. > > > > Ports uses 5.x afaik. I've installed it from ports also. Kind regards, Axel Scheepers From owner-freebsd-cluster@FreeBSD.ORG Wed Mar 9 01:00:28 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 64C5D16A4D1 for ; Wed, 9 Mar 2005 01:00:28 +0000 (GMT) Received: from web41302.mail.yahoo.com (web41302.mail.yahoo.com [66.218.93.51]) by mx1.FreeBSD.org (Postfix) with SMTP id 3E8AD43D54 for ; Wed, 9 Mar 2005 01:00:21 +0000 (GMT) (envelope-from ron_chen_123@yahoo.com) Received: (qmail 2680 invoked by uid 60001); 9 Mar 2005 01:00:20 -0000 Comment: DomainKeys? See http://antispam.yahoo.com/domainkeys DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=s1024; d=yahoo.com; b=nVcwvWJH6vUPACd4udDwcLc/dnS956iIM1MhqCedyV/P218xERIVnMD2+glSDhj65VfRubzODsfvnrY+OPUxDMcyvYmsyI25cZQk41c60do0ZBiaCIEVNYa/gTU08PzSl+YtNbZS5uB+zjOiU6bef9d4rNJk8dHCrdn4k6s6v9g= ; Message-ID: <20050309010020.2678.qmail@web41302.mail.yahoo.com> Received: from [24.42.232.253] by web41302.mail.yahoo.com via HTTP; Tue, 08 Mar 2005 17:00:20 PST Date: Tue, 8 Mar 2005 17:00:20 -0800 (PST) From: Ron Chen To: "Axel Scheepers (@home)" , sdsmith@telnix.com In-Reply-To: 6667 MIME-Version: 1.0 Content-Type: text/plain; charset=us-ascii cc: freebsd-hackers@freebsd.org cc: freebsd-cluster@freebsd.org Subject: Re: Failed to compile Gridengine 6.0u3 on FreeBSD X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 09 Mar 2005 01:00:28 -0000 --- "Axel Scheepers (@home)" wrote: > Ports uses 5.x afaik. I've installed it from ports Well, I know. But we(*) need to make sure that it works well on FreeBSD 5.x before other users tell us that SGE6 breaks on FreeBSD 5.x. BTW, SGE6 uses threads to scale to very large clusters (like several thousand machines). So I see a good match with SGE 6 on FreeBSD 5.x. -Ron (*) actually, I did some initial SGE porting work on FreeBSD, and Brooks cleaned it up and finished it :) > also. > > Kind regards, > Axel Scheepers > > __________________________________ Celebrate Yahoo!'s 10th Birthday! Yahoo! Netrospective: 100 Moments of the Web http://birthday.yahoo.com/netrospective/ From owner-freebsd-cluster@FreeBSD.ORG Thu Mar 10 01:28:14 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 032E116A4D0 for ; Thu, 10 Mar 2005 01:28:14 +0000 (GMT) Received: from rproxy.gmail.com (rproxy.gmail.com [64.233.170.194]) by mx1.FreeBSD.org (Postfix) with ESMTP id 6FE7943D55 for ; Thu, 10 Mar 2005 01:28:13 +0000 (GMT) (envelope-from wbierman@gmail.com) Received: by rproxy.gmail.com with SMTP id j1so332441rnf for ; Wed, 09 Mar 2005 17:28:13 -0800 (PST) DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=beta; d=gmail.com; h=received:message-id:date:from:reply-to:to:subject:mime-version:content-type:content-transfer-encoding; b=TI5ptTqIp86TCtPibSHi6RZXBedVhwokxlHf6MC1SN/FS4XmDWZlLb+rVDl6uHSWtIXdrPT1rvHwoaskWFgkJoFyftdEPwmde4pdKE68j7asZNIwTTXdniH+XeBLepQNcS/aFmy8YEnvnjqjKWKVK9fXFPmPjHLMLqkx6GxrqBs= Received: by 10.38.82.51 with SMTP id f51mr1396373rnb; Wed, 09 Mar 2005 17:28:12 -0800 (PST) Received: by 10.38.88.21 with HTTP; Wed, 9 Mar 2005 17:28:12 -0800 (PST) Message-ID: Date: Wed, 9 Mar 2005 15:28:12 -1000 From: William Bierman To: freebsd-cluster@freebsd.org Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Subject: install CD? X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list Reply-To: William Bierman List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 10 Mar 2005 01:28:14 -0000 Has anyone ever attempted to create a bootable install CD to install the cluster node image, and configure it automatically? I have done this, and am having a small problem.. When a newly installed machine boots, the kernel loads fine, but has a problem handing control over to init. init never gets called! I know this because I put a debug statement at the end of execution of the kernel's loading process (when it does execve() on init) and the first line in init. The init print statement is never shown, but the kernel one is. Any clues? From owner-freebsd-cluster@FreeBSD.ORG Thu Mar 10 01:45:11 2005 Return-Path: Delivered-To: freebsd-cluster@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 2F6E516A4CE for ; Thu, 10 Mar 2005 01:45:11 +0000 (GMT) Received: from rproxy.gmail.com (rproxy.gmail.com [64.233.170.192]) by mx1.FreeBSD.org (Postfix) with ESMTP id C7E8143D41 for ; Thu, 10 Mar 2005 01:45:10 +0000 (GMT) (envelope-from kip.macy@gmail.com) Received: by rproxy.gmail.com with SMTP id j1so334999rnf for ; Wed, 09 Mar 2005 17:45:10 -0800 (PST) DomainKey-Signature: a=rsa-sha1; q=dns; c=nofws; s=beta; d=gmail.com; h=received:message-id:date:from:reply-to:to:subject:cc:in-reply-to:mime-version:content-type:content-transfer-encoding:references; b=lARz/ZNeq2xzaD0CQpewIbh7LxW004yNIUUxs7DU3Yoofv1yKzi0N9zAyyeK8izvlEohBJHLqRffR7Fxp0aiH6xFCFVk+R3QoyYXGpUI2OTGzL7SaS7W/yZnEtL22FHMJk7PxtLFhg5/XvZflr+IVnnnXB+L3Wr3Zzwn7ADsKms= Received: by 10.38.97.57 with SMTP id u57mr1391910rnb; Wed, 09 Mar 2005 17:45:10 -0800 (PST) Received: by 10.39.3.44 with HTTP; Wed, 9 Mar 2005 17:45:10 -0800 (PST) Message-ID: Date: Wed, 9 Mar 2005 17:45:10 -0800 From: Kip Macy To: William Bierman In-Reply-To: Mime-Version: 1.0 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit References: cc: freebsd-cluster@freebsd.org Subject: Re: install CD? X-BeenThere: freebsd-cluster@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list Reply-To: Kip Macy List-Id: Clustering FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 10 Mar 2005 01:45:11 -0000 I'm not sure what your issue is, but I know that start_init will hang trying to mount devfs if there is no /dev On Wed, 9 Mar 2005 15:28:12 -1000, William Bierman wrote: > Has anyone ever attempted to create a bootable install CD to install > the cluster node image, and configure it automatically? I have done > this, and am having a small problem.. > > When a newly installed machine boots, the kernel loads fine, but has a > problem handing control over to init. init never gets called! I know > this because I put a debug statement at the end of execution of the > kernel's loading process (when it does execve() on init) and the first > line in init. The init print statement is never shown, but the kernel > one is. > > Any clues? > _______________________________________________ > freebsd-cluster@freebsd.org mailing list > http://lists.freebsd.org/mailman/listinfo/freebsd-cluster > To unsubscribe, send any mail to "freebsd-cluster-unsubscribe@freebsd.org" >