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Date: Wed, 28 Feb 2001 13:23:28 +0200
From: johann@egenetics.com
To: FreeBSD-gnats-submit@freebsd.org
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Subject: ports/25449: Port update: biology/emboss
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>Number:         25449
>Category:       ports
>Synopsis:       Port update: biology/emboss
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Wed Feb 28 03:30:01 PST 2001
>Closed-Date:
>Last-Modified:
>Originator:     Johann Visagie
>Release:        FreeBSD 5.0-CURRENT i386
>Organization:
Electric Genetics
>Environment:
>Description:
- Update to version 1.10.1
- Since all EMBOSS and EMBASSY distfiles are always rerolled for a new
  release, the MD5 signatures once again have to be updated.
>How-To-Repeat:
>Fix:
diff -ruN emboss.bak/Makefile emboss/Makefile
--- emboss.bak/Makefile	Wed Feb 28 13:14:20 2001
+++ emboss/Makefile	Wed Feb 28 11:34:52 2001
@@ -6,7 +6,7 @@
 #
 
 PORTNAME=	emboss
-PORTVERSION=	1.10.0
+PORTVERSION=	1.10.1
 CATEGORIES=	biology
 MASTER_SITES=	ftp://ftp.uk.embnet.org/pub/EMBOSS/ \
 		ftp://ftp.no.embnet.org/pub/EMBOSS/ \
diff -ruN emboss.bak/distinfo emboss/distinfo
--- emboss.bak/distinfo	Wed Feb 28 13:14:20 2001
+++ emboss/distinfo	Wed Feb 28 12:07:17 2001
@@ -1,5 +1,5 @@
-MD5 (emboss/EMBOSS-1.10.0.tar.gz) = cfe21d6af3683ad99546a380ac18699b
+MD5 (emboss/EMBOSS-1.10.1.tar.gz) = de75c2e3c93ce2e52926edb67bdbdced
 MD5 (emboss/EMNU-1.0.4.tar.gz) = 6ebdf128e1b531911ff97d2b8d6a59d8
-MD5 (emboss/MSE-0.0.4.tar.gz) = ec94c169918038aa318e035cd7bd2d83
-MD5 (emboss/PHYLIP-3.573c.tar.gz) = e1ca6cb87756836f0e1b3b6b026e826b
-MD5 (emboss/TOPO-0.1.tar.gz) = d570fe3e41380d99646d99b5d1586da1
+MD5 (emboss/MSE-0.0.4.tar.gz) = 2d7f281a6d3d4c08500d8567ec9e3f2c
+MD5 (emboss/PHYLIP-3.573c.tar.gz) = c257a564bbd9bf48433978bc5206a91d
+MD5 (emboss/TOPO-0.1.tar.gz) = 07b94f0462e51e811c30f13ad0a54247
diff -ruN emboss.bak/pkg-plist emboss/pkg-plist
--- emboss.bak/pkg-plist	Wed Feb 28 13:14:20 2001
+++ emboss/pkg-plist	Wed Feb 28 12:36:31 2001
@@ -68,7 +68,6 @@
 bin/cirdna
 bin/codcmp
 bin/coderet
-bin/complex
 bin/compseq
 bin/cons
 bin/cpgplot
@@ -106,6 +105,7 @@
 bin/geecee
 bin/getorf
 bin/helixturnhelix
+bin/hmoment
 bin/iep
 bin/infoseq
 bin/isochore
@@ -268,6 +268,7 @@
 share/EMBOSS/acd/getorf.acd
 share/EMBOSS/acd/helixturnhelix.acd
 share/EMBOSS/acd/histogramtest.acd
+share/EMBOSS/acd/hmoment.acd
 share/EMBOSS/acd/iep.acd
 share/EMBOSS/acd/infoseq.acd
 share/EMBOSS/acd/isochore.acd
@@ -761,7 +762,6 @@
 share/doc/EMBOSS/programs/html/coderet.html
 share/doc/EMBOSS/programs/html/coding_regions_group.html
 share/doc/EMBOSS/programs/html/comparison_group.html
-share/doc/EMBOSS/programs/html/complex.html
 share/doc/EMBOSS/programs/html/compseq.html
 share/doc/EMBOSS/programs/html/cons.html
 share/doc/EMBOSS/programs/html/consense.html
@@ -1010,7 +1010,6 @@
 share/doc/EMBOSS/programs/text/clique.txt
 share/doc/EMBOSS/programs/text/codcmp.txt
 share/doc/EMBOSS/programs/text/coderet.txt
-share/doc/EMBOSS/programs/text/complex.txt
 share/doc/EMBOSS/programs/text/compseq.txt
 share/doc/EMBOSS/programs/text/cons.txt
 share/doc/EMBOSS/programs/text/consense.txt
>Release-Note:
>Audit-Trail:
>Unformatted:

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