From owner-cvs-all@FreeBSD.ORG Wed Jan 21 00:34:35 2004 Return-Path: Delivered-To: cvs-all@freebsd.org Received: from mx1.FreeBSD.org (mx1.freebsd.org [216.136.204.125]) by hub.freebsd.org (Postfix) with ESMTP id 1476016A4CE; Wed, 21 Jan 2004 00:34:35 -0800 (PST) Received: from repoman.freebsd.org (repoman.freebsd.org [216.136.204.115]) by mx1.FreeBSD.org (Postfix) with ESMTP id DFDB943D3F; Wed, 21 Jan 2004 00:34:33 -0800 (PST) (envelope-from linimon@FreeBSD.org) Received: from repoman.freebsd.org (localhost [127.0.0.1]) by repoman.freebsd.org (8.12.10/8.12.10) with ESMTP id i0L8YX0B071308; Wed, 21 Jan 2004 00:34:33 -0800 (PST) (envelope-from linimon@repoman.freebsd.org) Received: (from linimon@localhost) by repoman.freebsd.org (8.12.10/8.12.10/Submit) id i0L8YXgx071307; Wed, 21 Jan 2004 00:34:33 -0800 (PST) (envelope-from linimon) Message-Id: <200401210834.i0L8YXgx071307@repoman.freebsd.org> From: Mark Linimon Date: Wed, 21 Jan 2004 00:34:33 -0800 (PST) To: ports-committers@FreeBSD.org, cvs-ports@FreeBSD.org, cvs-all@FreeBSD.org X-FreeBSD-CVS-Branch: HEAD Subject: cvs commit: ports/biology/p5-bioperl Makefile distinfo pkg-plist ports/biology/p5-bioperl/files ext.msg patch-aa patch-manify X-BeenThere: cvs-all@freebsd.org X-Mailman-Version: 2.1.1 Precedence: list List-Id: CVS commit messages for the entire tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 21 Jan 2004 08:34:35 -0000 linimon 2004/01/21 00:34:33 PST FreeBSD ports repository Modified files: biology/p5-bioperl Makefile distinfo pkg-plist Added files: biology/p5-bioperl/files patch-manify Removed files: biology/p5-bioperl/files ext.msg patch-aa Log: Major update from 0.7.2 to 1.4 by new maintainer. This is almost a complete rework of the port. See the page http://news.open-bio.org/archives/cat_bioperl.html for the changes between 1.2 and 1.4. The older changes are in the CVS tree. From the new maintainer: Note that this new port just handles the installation of bioperl and not of additional extra stuff (bioperl-gui, bioperl-corba-server, bioperl-corba-client). This is unlike the behaviour of the current port. The extra stuff, though still functional, had very little adoption among users, and does not appear to be currently supported/maintained. PR: ports/47303 (and subsequent) Submitted by: Fernan Aguero (new maintainer) Revision Changes Path 1.9 +582 -162 ports/biology/p5-bioperl/Makefile 1.6 +1 -5 ports/biology/p5-bioperl/distinfo 1.2 +0 -16 ports/biology/p5-bioperl/files/ext.msg (dead) 1.2 +0 -9 ports/biology/p5-bioperl/files/patch-aa (dead) 1.1 +29 -0 ports/biology/p5-bioperl/files/patch-manify (new) 1.7 +1077 -213 ports/biology/p5-bioperl/pkg-plist