From owner-freebsd-pkg-fallout@FreeBSD.ORG Thu Aug 1 12:41:32 2013 Return-Path: Delivered-To: pkg-fallout@FreeBSD.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) (using TLSv1 with cipher ADH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTP id 9B023561 for ; Thu, 1 Aug 2013 12:41:32 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy2.isc.freebsd.org (unknown [IPv6:2001:4f8:3:ffe0:4072:0:16:39]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by mx1.freebsd.org (Postfix) with ESMTPS id 7892C2FD0 for ; Thu, 1 Aug 2013 12:41:32 +0000 (UTC) Received: from beefy2.isc.freebsd.org (localhost [127.0.0.1]) by beefy2.isc.freebsd.org (8.14.7/8.14.7) with ESMTP id r71CfVn7027565 for ; Thu, 1 Aug 2013 12:41:31 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy2.isc.freebsd.org (8.14.7/8.14.7/Submit) id r71CfVb7027555 for pkg-fallout@FreeBSD.org; Thu, 1 Aug 2013 12:41:31 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Thu, 1 Aug 2013 12:41:31 GMT From: pkg-fallout@FreeBSD.org Message-Id: <201308011241.r71CfVb7027555@beefy2.isc.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [RELEASE - head-default] Build failed for ugene-1.11.4 during build X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.14 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Thu, 01 Aug 2013 12:41:32 -0000 Maintainer: h2+fbsdports@fsfe.org Last committer: danfe@FreeBSD.org Ident: $FreeBSD: head/biology/ugene/Makefile 312918 2013-02-25 13:00:15Z danfe $ Log URL: http://beefy2.isc.freebsd.org/bulk/head-default/2013-08-01_04h04m49s/logs/ugene-1.11.4.log Build URL: http://beefy2.isc.freebsd.org/bulk/head-default/2013-08-01_04h04m49s Log: ====>> Building biology/ugene build started at Thu Aug 1 12:37:55 UTC 2013 port directory: /usr/ports/biology/ugene building for: FreeBSD head-default-job-05 10.0-CURRENT FreeBSD 10.0-CURRENT amd64 maintained by: h2+fbsdports@fsfe.org Makefile ident: $FreeBSD: head/biology/ugene/Makefile 312918 2013-02-25 13:00:15Z danfe $ Poudriere version: 3.1-pre ---Begin Environment--- OSVERSION=1000035 UNAME_v=FreeBSD 10.0-CURRENT UNAME_r=10.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 MASTERMNT=/usr/local/poudriere/data/build/head-default/ref PKG_EXT=txz FORCE_PACKAGE=yes tpid=46006 PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk NBPARALLEL=24 PKGNG=1 PKGNAME=ugene-1.11.4 PKG_DELETE=/usr/local/sbin/pkg delete -y -f PKG_ADD=/usr/local/sbin/pkg add PWD=/root MASTERNAME=head-default USER=root HOME=/root POUDRIERE_VERSION=3.1-pre SKIPSANITY=0 LOCALBASE=/usr/local PACKAGE_BUILDING=yes ---End Environment--- ---Begin OPTIONS List--- ---End OPTIONS List--- --CONFIGURE_ARGS-- --with-qt-includes=/usr/local/include/qt4 --with-qt-libraries=/usr/local/lib/qt4 --with-extra-libs=/usr/local/lib --with-extra-includes=/usr/local/include --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- TMPDIR="/tmp" MOC="/usr/local/bin/moc-qt4" UIC="/usr/local/bin/uic-qt4" LIBS="" QMAKE="/usr/local/bin/qmake-qt4" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-clang" QTDIR="/usr/local" TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- TMPDIR="/tmp" QMAKESPEC="/usr/local/share/qt4/mkspecs/freebsd-clang" TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 444" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/ugene DOCSDIR=/usr/local/share/doc/ugene EXAMPLESDIR=/usr/local/share/examples/ugene WWWDIR=/usr/local/www/ugene ETCDIR=/usr/local/etc/ugene --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes NO_RESTRICTED=yes DISABLE_MAKE_JOBS=yes ---End make.conf--- ===> Cleaning for ugene-1.11.4 =================================================== ========================================================================= =================================================== ===> ugene-1.11.4 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.1.4_1.txz Installing pkg-1.1.4_1... done If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of ugene-1.11.4 ========================================================================= =================================================== ========================================================================= =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by ugene-1.11.4 for building ========================================================================= =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by ugene-1.11.4 for building => SHA256 Checksum OK for ugene-1.11.4.tar.gz. ========================================================================= =================================================== ========================================================================= =================================================== ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by ugene-1.11.4 for building ===> Extracting for ugene-1.11.4 => SHA256 Checksum OK for ugene-1.11.4.tar.gz. ========================================================================= =================================================== ========================================================================= =================================================== ===> Patching for ugene-1.11.4 ===> Applying FreeBSD patches for ugene-1.11.4 ========================================================================= =================================================== ===> ugene-1.11.4 depends on file: /usr/local/libdata/pkgconfig/glproto.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/glproto.pc in /usr/ports/x11/glproto ===> Installing existing package /packages/All/glproto-1.4.16.txz Installing glproto-1.4.16... done ===> Returning to build of ugene-1.11.4 ===> ugene-1.11.4 depends on file: /usr/local/libdata/pkgconfig/dri2proto.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/dri2proto.pc in /usr/ports/x11/dri2proto ===> Installing existing package /packages/All/dri2proto-2.8.txz Installing dri2proto-2.8... done ===> Returning to build of ugene-1.11.4 ===> ugene-1.11.4 depends on file: /usr/local/libdata/pkgconfig/xtst.pc - not found ===> Verifying install for /usr/local/libdata/pkgconfig/xtst.pc in /usr/ports/x11/libXtst ===> Installing existing package /packages/All/libXtst-1.2.2.txz Installing libXtst-1.2.2...Installing xproto-7.0.24... done Installing xextproto-7.2.1... done Installing recordproto-1.14.2... done Installing libxcb-1.9.1...Installing libXdmcp-1.1.1... done Installing libXau-1.0.8... done Installing libxml2-2.8.0_2...Installing pkgconf-0.9.2_1... done Installing libiconv-1.14_1... done done Installing libpthread-stubs-0.3_3... done done Installing libXi-1.7.2,1...Installing libXfixes-5.0.1...Installing libX11-1.6.0,1...Installing kbproto-1.0.6... done done Installing fixesproto-5.0... done done Installing libXext-1.3.2,1... done Installing inputproto-2.3... done done done ===> Returning to build of ugene-1.11.4 ===> ugene-1.11.4 depends on file: /usr/local/lib/qt4/libQtGui.so - not found ===> Verifying install for /usr/local/lib/qt4/libQtGui.so in /usr/ports/x11-toolkits/qt4-gui ===> Installing existing package /packages/All/qt4-gui-4.8.4.txz Installing qt4-gui-4.8.4...Installing xset-1.2.2_1...Installing libSM-1.2.1,1...Installing libICE-1.0.8,1... done done Installing libXt-1.1.4,1... done Installing libXmu-1.1.1,1... done Installing libXfontcache-1.0.5...Installing fontcacheproto-0.1.3... done done done Installing xprop-1.2.1... done Installing xineramaproto-1.2.1... done Installing renderproto-0.11.1... done Installing randrproto-1.4.0... done Installing libXrender-0.9.8... done Installing libXrandr-1.4.1... done Installing libXinerama-1.1.3,1... done Installing libXcursor-1.1.14... done Installing xorg-fonts-truetype-7.7_1...Installing mkfontscale-1.1.1...Installing libfontenc-1.1.2... done Installing freetype2-2.4.12_1... done done Installing mkfontdir-1.0.7... done Installing fontconfig-2.9.0,1...Installing expat-2.1.0... done Running fc-cache to build fontconfig cache... /usr/local/share/fonts: skipping, no such directory /usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs /usr/local/lib/X11/fonts/local: caching, new cache contents: 0 fonts, 0 dirs /root/.fonts: skipping, no such directory /var/db/fontconfig: cleaning cache directory /root/.fontconfig: not cleaning non-existent cache directory fc-cache: succeeded done Installing font-util-1.3.0... done Installing font-misc-meltho-1.0.3... done Installing font-misc-ethiopic-1.0.3... done Installing font-bh-ttf-1.0.3... done Installing encodings-1.0.4,1... done Installing dejavu-2.33... done done Installing hicolor-icon-theme-0.12... done Installing python27-2.7.5_1...Installing gettext-0.18.3... done done Installing perl-5.14.4...Removing stale symlinks from /usr/bin... Skipping /usr/bin/perl Skipping /usr/bin/perl5 Done. Creating various symlinks in /usr/bin... Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl5 Done. Cleaning up /etc/make.conf... Done. Spamming /etc/make.conf... Done. done Installing png-1.5.17... done Installing xdg-utils-1.0.2_8... done Installing qt4-corelib-4.8.4_3...Installing pcre-8.33... done