From owner-freebsd-ports-bugs@FreeBSD.ORG Sun Dec 20 18:10:02 2009 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id 9FA291065679 for ; Sun, 20 Dec 2009 18:10:02 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id 664088FC14 for ; Sun, 20 Dec 2009 18:10:02 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.3/8.14.3) with ESMTP id nBKIA2aY071669 for ; Sun, 20 Dec 2009 18:10:02 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.3/8.14.3/Submit) id nBKIA265071668; Sun, 20 Dec 2009 18:10:02 GMT (envelope-from gnats) Resent-Date: Sun, 20 Dec 2009 18:10:02 GMT Resent-Message-Id: <200912201810.nBKIA265071668@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, KATO Tsuguru Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:4f8:fff6::34]) by hub.freebsd.org (Postfix) with ESMTP id B52631065697 for ; Sun, 20 Dec 2009 18:00:49 +0000 (UTC) (envelope-from tkato432@yahoo.com) Received: from msa102lp.auone-net.jp (msa102lp.auone-net.jp [222.3.140.165]) by mx1.freebsd.org (Postfix) with ESMTP id 6E7638FC4E for ; Sun, 20 Dec 2009 18:00:49 +0000 (UTC) Received: from localhost.localdomain (ZT046205.ppp.dion.ne.jp [59.128.46.205]) by msa102lp.auone-net.jp (au one net msa) with ESMTP id 318394AC037 for ; Mon, 21 Dec 2009 03:00:42 +0900 (JST) Message-Id: <20091221030007.b4d1374e.tkato432@yahoo.com> Date: Mon, 21 Dec 2009 03:00:07 +0900 From: KATO Tsuguru To: FreeBSD-gnats-submit@FreeBSD.org Cc: Subject: ports/141812: Update port: biology/mopac to 7.1.11 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sun, 20 Dec 2009 18:10:02 -0000 >Number: 141812 >Category: ports >Synopsis: Update port: biology/mopac to 7.1.11 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Sun Dec 20 18:10:01 UTC 2009 >Closed-Date: >Last-Modified: >Originator: KATO Tsuguru >Release: FreeBSD 7.2-RELEASE-p5 i386 >Organization: >Environment: >Description: - Update to version 7.1.11 New file: files/patch-src__Makefile.am >How-To-Repeat: >Fix: diff -urN /usr/ports/biology/mopac/Makefile biology/mopac/Makefile --- /usr/ports/biology/mopac/Makefile 2009-11-19 16:40:32.000000000 +0900 +++ biology/mopac/Makefile 2009-12-17 03:44:08.000000000 +0900 @@ -7,40 +7,40 @@ PORTNAME= mopac PORTVERSION= 7.${MOPAC_SUBVERSION} -PORTREVISION= 1 PORTEPOCH= 1 CATEGORIES= biology -MASTER_SITES= SF/${PORTNAME}7/${PORTNAME}7/${PORTNAME}7-1.10 -DISTNAME= mopac7-${MOPAC_SUBVERSION} -EXTRACT_SUFX= .tgz +MASTER_SITES= SF/${PORTNAME}7/${PORTNAME}7/${PORTNAME}7-1.00 +DISTNAME= ${PORTNAME}7-${MOPAC_SUBVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Semi-empirical (MNDO, etc.) molecular orbital calculation -BUILD_DEPENDS= f2c:${PORTSDIR}/lang/f2c LIB_DEPENDS= f2c:${PORTSDIR}/lang/f2c -MOPAC_SUBVERSION= 1.10 -WRKSRC= ${WRKDIR}/mopac7-${MOPAC_SUBVERSION} -GNU_CONFIGURE= yes USE_GMAKE= yes -CONFIGURE_ENV+= CFLAGS="-I${LOCALBASE}/include" LDFLAGS="-L${LOCALBASE}/lib" -MAKE_ENV+= LDFLAGS="-L${LOCALBASE}/lib" -MAKE_JOBS_UNSAFE= yes -CFLAGS+= -I${LOCALBASE}/include +USE_AUTOTOOLS= aclocal:110 automake:110 autoconf:262 libtool:22 +ACLOCAL_ARGS= -I ${LOCALBASE}/share/aclocal +AUTOMAKE_ARGS= --add-missing --copy +CONFIGURE_ENV= CPPFLAGS="${CPPFLAGS}" LDFLAGS="${LDFLAGS}" +MAKE_JOBS_SAFE= yes +USE_LDCONFIG= yes + +CPPFLAGS= -I${LOCALBASE}/include +LDFLAGS= -L${LOCALBASE}/lib + +MOPAC_SUBVERSION= 1.11 post-patch: - @${REINPLACE_CMD} -e \ - "s,pkgconfigdir = .*,pkgconfigdir = $$\{exec_prefix\}/libdata/pkgconfig," \ - ${WRKSRC}/Makefile.in + @${REINPLACE_CMD} -e '/pkgconfig/s|$$(libdir)|$$(prefix)/libdata|g' \ + ${WRKSRC}/Makefile.am + @${REINPLACE_CMD} -e '/usage/s|run_||g' \ + ${WRKSRC}/run_${PORTNAME}7 post-install: - ${INSTALL_SCRIPT} ${WRKSRC}/run_mopac7 ${PREFIX}/bin/mopac7 -.if !defined(NOPORTDOCS) - @${MKDIR} ${EXAMPLESDIR} + ${INSTALL_SCRIPT} ${WRKSRC}/run_${PORTNAME}7 ${PREFIX}/bin/${PORTNAME}7 +.if !defined(NOPORTEXAMPLES) @${MKDIR} ${EXAMPLESDIR}/test - ${INSTALL_DATA} ${WRKSRC}/tests/*dat ${EXAMPLESDIR}/test - ${INSTALL_DATA} ${WRKSRC}/tests/*OUT ${EXAMPLESDIR}/test + ${INSTALL_DATA} ${WRKSRC}/tests/*.dat ${EXAMPLESDIR}/test .endif .include diff -urN /usr/ports/biology/mopac/distinfo biology/mopac/distinfo --- /usr/ports/biology/mopac/distinfo 2006-07-03 13:41:35.000000000 +0900 +++ biology/mopac/distinfo 2009-12-17 02:59:53.000000000 +0900 @@ -1,3 +1,3 @@ -MD5 (mopac7-1.10.tgz) = d5352a3cf349b9ac4df943bb7992cfa9 -SHA256 (mopac7-1.10.tgz) = 993ace860c77345d1c8629f416bfc765610b9f264e9885b3777f44b745817ab5 -SIZE (mopac7-1.10.tgz) = 1596446 +MD5 (mopac7-1.11.tar.gz) = 501c34ad4995d127dca8461a05ceb66a +SHA256 (mopac7-1.11.tar.gz) = 56dd55fc7e00e74095200b67aed1e9f0d06daa5b71dccdf944b5de5830d31921 +SIZE (mopac7-1.11.tar.gz) = 1157353 diff -urN /usr/ports/biology/mopac/files/patch-src__Makefile.am biology/mopac/files/patch-src__Makefile.am --- /usr/ports/biology/mopac/files/patch-src__Makefile.am 1970-01-01 09:00:00.000000000 +0900 +++ biology/mopac/files/patch-src__Makefile.am 2009-12-17 03:24:20.000000000 +0900 @@ -0,0 +1,12 @@ +--- src/Makefile.am.orig 2005-08-22 20:06:45.000000000 +0900 ++++ src/Makefile.am 2009-12-17 03:23:46.000000000 +0900 +@@ -42,7 +42,8 @@ + if HAVE_F2C + noinst_PROGRAMS = mopac7 + mopac7_SOURCES = mopac7app.c +-mopac7_LDFLAGS = -lmopac7 -lf2c -lm ++mopac7_LDADD = libmopac7.la ++mopac7_LDFLAGS = -lf2c -lm + else + # the executable is not built! + # so nothing here... diff -urN /usr/ports/biology/mopac/pkg-plist biology/mopac/pkg-plist --- /usr/ports/biology/mopac/pkg-plist 2006-07-10 14:32:58.000000000 +0900 +++ biology/mopac/pkg-plist 2009-12-17 03:36:13.000000000 +0900 @@ -5,22 +5,18 @@ lib/libmopac7.so lib/libmopac7.so.0 libdata/pkgconfig/libmopac7.pc -%%PORTDOCS%%%%EXAMPLESDIR%%/test/1scf.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/elements.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/force.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/geometry.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/keys.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/nch34+.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/oldgeo.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/paras.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_cos.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_ef_.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_gre.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_pol.dat -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_cos.OUT -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_ef_.OUT -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_gre.OUT -%%PORTDOCS%%%%EXAMPLESDIR%%/test/test_pol.OUT -%%PORTDOCS%%@dirrm %%EXAMPLESDIR%%/test -%%PORTDOCS%%@dirrm %%EXAMPLESDIR%% +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/1scf.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/elements.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/force.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/geometry.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/keys.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/nch34+.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/oldgeo.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/paras.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/test_cos.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/test_ef_.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/test_gre.dat +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/test/test_pol.dat +%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%/test +%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%% @dirrm include/mopac7 >Release-Note: >Audit-Trail: >Unformatted: