Date: Tue, 29 Dec 2020 18:44:16 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv7-default][science/elk] Failed for elk-chemistry-6.8.4 in lib-depends Message-ID: <202012291844.0BTIiGsV097879@beefy12.nyi.freebsd.org>
next in thread | raw e-mail | index | archive | help
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: linimon@FreeBSD.org Ident: $FreeBSD: head/science/elk/Makefile 555601 2020-11-17 22:32:32Z linimon $ Log URL: http://beefy12.nyi.freebsd.org/data/head-armv7-default/p559535_s368820/logs/elk-chemistry-6.8.4.log Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=head-armv7-default&build=p559535_s368820 Log: =>> Building science/elk build started at Tue Dec 29 18:43:35 UTC 2020 port directory: /usr/ports/science/elk package name: elk-chemistry-6.8.4 building for: FreeBSD head-armv7-default-job-02 13.0-CURRENT FreeBSD 13.0-CURRENT 1300132 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/elk/Makefile 555601 2020-11-17 22:32:32Z linimon $ Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1300121 Jail OSVERSION: 1300132 Job Id: 02 !!! Jail is newer than host. (Jail: 1300132, Host: 1300121) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1300132 UNAME_v=FreeBSD 13.0-CURRENT 1300132 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/head-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for elk-chemistry-6.8.4: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples ====> Enable parallelizations: OPENMP=on: Parallel processing support via OpenMP MPI=on: MPI (Message Passing Interface) support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/elk/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/elk/work HOME=/wrkdirs/usr/ports/science/elk/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/elk/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/elk/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/elk/work HOME=/wrkdirs/usr/ports/science/elk/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/elk/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="/nxb-bin/us r/bin/cpp" CPPFLAGS="" LDFLAGS=" /usr/local/lib/gcc9/libgcc_s.so -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/elk" EXAMPLESDIR="share/examples/elk" DATADIR="share/elk" WWWDIR="www/elk" ETCDIR="etc/elk" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/elk DOCSDIR=/usr/local/share/doc/elk EXAMPLESDIR=/usr/local/share/examples/elk WWWDIR=/usr/local/www/elk ETCDIR=/usr/local/etc/elk --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 11.0.0 (git@github.com:llvm/llvm-project.git llvmorg-11.0.0-0-g176249bd673) Target: armv7-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300132 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> elk-chemistry-6.8.4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.1.txz [head-armv7-default-job-02] Installing pkg-1.16.1... [head-armv7-default-job-02] Extracting pkg-1.16.1: .......... done ===> elk-chemistry-6.8.4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of elk-chemistry-6.8.4 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by elk-chemistry-6.8.4 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by elk-chemistry-6.8.4 for building => SHA256 Checksum OK for elk-chemistry/elk-6.8.4.tgz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by elk-chemistry-6.8.4 for building ===> Extracting for elk-chemistry-6.8.4 => SHA256 Checksum OK for elk-chemistry/elk-6.8.4.tgz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for elk-chemistry-6.8.4 =========================================================================== =======================<phase: build-depends >============================ ===> elk-chemistry-6.8.4 depends on executable: gfortran9 - not found ===> Installing existing package /packages/All/gcc9-9.3.0_1.txz [head-armv7-default-job-02] Installing gcc9-9.3.0_1... [head-armv7-default-job-02] `-- Installing binutils-2.33.1_4,1... [head-armv7-default-job-02] | `-- Installing gettext-runtime-0.21... [head-armv7-default-job-02] | | `-- Installing indexinfo-0.3.1... [head-armv7-default-job-02] | | `-- Extracting indexinfo-0.3.1: .... done [head-armv7-default-job-02] | `-- Extracting gettext-runtime-0.21: .......... done [head-armv7-default-job-02] `-- Extracting binutils-2.33.1_4,1: .......... done [head-armv7-default-job-02] `-- Installing gmp-6.2.1... [head-armv7-default-job-02] `-- Extracting gmp-6.2.1: .......... done [head-armv7-default-job-02] `-- Installing mpc-1.1.0_2... [head-armv7-default-job-02] | `-- Installing mpfr-4.1.0... [head-armv7-default-job-02] | `-- Extracting mpfr-4.1.0: .......... done [head-armv7-default-job-02] `-- Extracting mpc-1.1.0_2: ......... done [head-armv7-default-job-02] Extracting gcc9-9.3.0_1: .......... done ===== Message from gcc9-9.3.0_1: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc9 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> elk-chemistry-6.8.4 depends on executable: gfortran9 - found ===> Returning to build of elk-chemistry-6.8.4 ===> elk-chemistry-6.8.4 depends on package: gmake>=4.3 - not found ===> Installing existing package /packages/All/gmake-4.3_2.txz [head-armv7-default-job-02] Installing gmake-4.3_2... [head-armv7-default-job-02] Extracting gmake-4.3_2: .......... done ===> elk-chemistry-6.8.4 depends on package: gmake>=4.3 - found ===> Returning to build of elk-chemistry-6.8.4 ===> elk-chemistry-6.8.4 depends on file: /usr/local/bin/as - found =========================================================================== =======================<phase: lib-depends >============================ ===> elk-chemistry-6.8.4 depends on shared library: libblis.so - not found ===> Installing existing package /packages/All/blis-0.8.0.txz [head-armv7-default-job-02] Installing blis-0.8.0... [head-armv7-default-job-02] `-- Installing python37-3.7.9_1... [head-armv7-default-job-02] | `-- Installing libffi-3.3_1... [head-armv7-default-job-02] | `-- Extracting libffi-3.3_1: .......... done [head-armv7-default-job-02] | `-- Installing readline-8.0.4... [head-armv7-default-job-02] | `-- Extracting readline-8.0.4: .......... done [head-armv7-default-job-02] `-- Extracting python37-3.7.9_1: .......... done [head-armv7-default-job-02] Extracting blis-0.8.0: .......... done ===== Message from python37-3.7.9_1: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===> elk-chemistry-6.8.4 depends on shared library: libblis.so - found (/usr/local/lib/libblis.so) ===> Returning to build of elk-chemistry-6.8.4 ===> elk-chemistry-6.8.4 depends on shared library: libopenblas.so - not found ===> Installing existing package /packages/All/openblas-0.3.12,1.txz [head-armv7-default-job-02] Installing openblas-0.3.12,1... [head-armv7-default-job-02] Extracting openblas-0.3.12,1: .......... done ===> elk-chemistry-6.8.4 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) ===> Returning to build of elk-chemistry-6.8.4 ===> elk-chemistry-6.8.4 depends on shared library: libwannier.so - not found ===> Installing existing package /packages/All/wannier90-3.1.0_1.txz [head-armv7-default-job-02] Installing wannier90-3.1.0_1... [head-armv7-default-job-02] `-- Installing blas-3.5.0_6... [head-armv7-default-job-02] `-- Extracting blas-3.5.0_6: ....... done [head-armv7-default-job-02] `-- Installing lapack-3.5.0_8... [head-armv7-default-job-02] `-- Extracting lapack-3.5.0_8: .......... done [head-armv7-default-job-02] Extracting wannier90-3.1.0_1: ........ done ===> elk-chemistry-6.8.4 depends on shared library: libwannier.so - not found *** Error code 1 Stop. make: stopped in /usr/ports/science/elk
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?202012291844.0BTIiGsV097879>