From owner-svn-ports-head@freebsd.org Mon Jan 13 17:36:58 2020 Return-Path: Delivered-To: svn-ports-head@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id C91B01E44A9; Mon, 13 Jan 2020 17:36:58 +0000 (UTC) (envelope-from fernape@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 47xLPQ51HMz3KYr; Mon, 13 Jan 2020 17:36:58 +0000 (UTC) (envelope-from fernape@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id A6E948399; Mon, 13 Jan 2020 17:36:58 +0000 (UTC) (envelope-from fernape@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 00DHawjl077528; Mon, 13 Jan 2020 17:36:58 GMT (envelope-from fernape@FreeBSD.org) Received: (from fernape@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 00DHawDm077525; Mon, 13 Jan 2020 17:36:58 GMT (envelope-from fernape@FreeBSD.org) Message-Id: <202001131736.00DHawDm077525@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: fernape set sender to fernape@FreeBSD.org using -f From: =?UTF-8?Q?Fernando_Apestegu=c3=ada?= Date: Mon, 13 Jan 2020 17:36:58 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r522898 - head/biology/tRNAscan-SE X-SVN-Group: ports-head X-SVN-Commit-Author: fernape X-SVN-Commit-Paths: head/biology/tRNAscan-SE X-SVN-Commit-Revision: 522898 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 13 Jan 2020 17:36:58 -0000 Author: fernape Date: Mon Jan 13 17:36:57 2020 New Revision: 522898 URL: https://svnweb.freebsd.org/changeset/ports/522898 Log: biology/tRNAscan-SE: update to 2.0.5 This commit also changes maintainer's email. PR: 243248 Submitted by: mzaki@e-mail.ne.jp (maintainer) Modified: head/biology/tRNAscan-SE/Makefile head/biology/tRNAscan-SE/distinfo Modified: head/biology/tRNAscan-SE/Makefile ============================================================================== --- head/biology/tRNAscan-SE/Makefile Mon Jan 13 17:04:20 2020 (r522897) +++ head/biology/tRNAscan-SE/Makefile Mon Jan 13 17:36:57 2020 (r522898) @@ -2,12 +2,12 @@ # $FreeBSD$ PORTNAME= tRNAscan-SE -PORTVERSION= 2.0.3 +PORTVERSION= 2.0.5 CATEGORIES= biology MASTER_SITES= http://trna.ucsc.edu/software/ DISTFILES= ${DISTNAME:tl}${EXTRACT_SUFX} -MAINTAINER= mzaki@niid.go.jp +MAINTAINER= mzaki@e-mail.ne.jp COMMENT= Searching for tRNA genes in genomic sequence LICENSE= GPLv3+ @@ -15,11 +15,11 @@ LICENSE_FILE= ${WRKSRC}/COPYING RUN_DEPENDS= cmsearch:biology/infernal +USES= perl5 autoreconf + WRKSRC= ${WRKDIR}/${DISTNAME:C,\.[0-9]+$,,} GNU_CONFIGURE= yes - -USES= perl5 autoreconf MAKE_JOBS_UNSAFE= yes Modified: head/biology/tRNAscan-SE/distinfo ============================================================================== --- head/biology/tRNAscan-SE/distinfo Mon Jan 13 17:04:20 2020 (r522897) +++ head/biology/tRNAscan-SE/distinfo Mon Jan 13 17:36:57 2020 (r522898) @@ -1,3 +1,3 @@ -TIMESTAMP = 1557725777 -SHA256 (trnascan-se-2.0.3.tar.gz) = b305c1bf226d16833349b22ad1f3160a52ad30f577a336128da3cc76d5772a4e -SIZE (trnascan-se-2.0.3.tar.gz) = 4372985 +TIMESTAMP = 1578666520 +SHA256 (trnascan-se-2.0.5.tar.gz) = 92917c2dbec31f9cebef88671418696f077768f00fb7fe483be1a6093b4e7e60 +SIZE (trnascan-se-2.0.5.tar.gz) = 4373181