Date: Thu, 22 Apr 2010 02:32:49 +0800 (CST) From: Sunpoet Po-Chuan Hsieh <sunpoet@sunpoet.net> To: FreeBSD-gnats-submit@FreeBSD.org Subject: ports/145923: [MAINTAINER] science/netcdf4: update to 4.1.1 Message-ID: <20100421183249.C5F992AEC5AD@sunpoet.net> Resent-Message-ID: <201004211840.o3LIe3nD030089@freefall.freebsd.org>
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>Number: 145923 >Category: ports >Synopsis: [MAINTAINER] science/netcdf4: update to 4.1.1 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Wed Apr 21 18:40:03 UTC 2010 >Closed-Date: >Last-Modified: >Originator: Sunpoet Po-Chuan Hsieh >Release: FreeBSD 8.0-STABLE amd64 >Organization: SUNPOET.net >Environment: System: FreeBSD bonjour.sunpoet.net 8.0-STABLE FreeBSD 8.0-STABLE #0: Fri Mar 19 09:16:38 CST 2010 >Description: - Update to 4.1.1 Removed file(s): - files/patch-libsrc4-nc4hdf.c Generated with FreeBSD Port Tools 0.99 >How-To-Repeat: >Fix: --- netcdf-4.1.1.patch begins here --- diff -ruN --exclude=CVS /usr/ports/sunpoet/netcdf4/../../science/netcdf4/Makefile /usr/ports/sunpoet/netcdf4/Makefile --- /usr/ports/sunpoet/netcdf4/../../science/netcdf4/Makefile 2009-09-27 17:27:24.000000000 +0800 +++ /usr/ports/sunpoet/netcdf4/Makefile 2010-04-21 21:27:17.000000000 +0800 @@ -6,8 +6,7 @@ # PORTNAME= netcdf -PORTVERSION= 4.0.1 -PORTREVISION= 1 +PORTVERSION= 4.1.1 CATEGORIES= science MASTER_SITES= http://www.unidata.ucar.edu/downloads/netcdf/ftp/ \ ftp://ftp.unidata.ucar.edu/pub/netcdf/ \ @@ -20,8 +19,8 @@ LATEST_LINK= netcdf4 CONFIGURE_ARGS= --disable-f77 --disable-f90 \ - --enable-cxx --enable-cxx-4 --enable-ncgen4 --enable-netcdf-4 \ - --enable-shared --with-hdf5=${LOCALBASE} --with-zlib=/usr + --enable-cxx --enable-cxx-4 --enable-netcdf-4 --enable-shared \ + --with-hdf5=${LOCALBASE} --with-zlib=/usr CONFIGURE_ENV+= CPPFLAGS="${CPPFLAGS} -I${LOCALBASE}/include -fPIC -DPIC -Df2cFortran" MAKE_ENV+= MAKEINFOFLAGS="--no-split" INFODIR="${PREFIX}/${INFO_PATH}" @@ -30,13 +29,13 @@ LIB_DEPENDS+= hdf5.6:${PORTSDIR}/science/hdf5-18 -INFO= netcdf netcdf-c netcdf-cxx netcdf-cxx4 netcdf-f77 \ - netcdf-f90 netcdf-install netcdf-tutorial +INFO= netcdf netcdf-c netcdf-cxx netcdf-f77 netcdf-f90 \ + netcdf-install netcdf-tutorial -MAN1= ncdump.1 ncgen.1 ncgen4.1 +MAN1= nccopy.1 ncdump.1 ncgen.1 ncgen3.1 MAN3= netcdf.3 -OPTIONS= HDF5_CONVERT "Do data conversion through HDF5" off +OPTIONS= SZIP "SZIP support (required if HDF5 was built with SZIP)" off .if !defined(NOPORTDOCS) CONFIGURE_ARGS+=--enable-docs-install @@ -44,20 +43,20 @@ CONFIGURE_ARGS+=--disable-docs-install .endif -.if defined(WITH_HDF5_CONVERT) -CONFIGURE_ARGS+=--enable-hdf5-convert +.if defined(WITH_SZIP) +CONFIGURE_ARGS+=--with-szlib=${LOCALBASE} +LIB_DEPEND+= sz.2:${PORTSDIR}/science/szip .endif post-patch: @${REINPLACE_CMD} -e \ 's|$$(libdir)/pkgconfig|$$(prefix)/libdata/pkgconfig|' \ ${WRKSRC}/Makefile.in - @${REINPLACE_CMD} -e '288 s/\(info_docs\).*/html_docs\)/' \ + @${REINPLACE_CMD} -e '297 s/\(info_docs\).*/html_docs\)/' \ ${WRKSRC}/man4/Makefile.in .if defined(NOPORTDOCS) - @${REINPLACE_CMD} -e '829 s/install-docDATA //' \ + @${REINPLACE_CMD} -e '839 s/install-docDATA //' \ ${WRKSRC}/man4/Makefile.in - .endif post-configure: diff -ruN --exclude=CVS /usr/ports/sunpoet/netcdf4/../../science/netcdf4/distinfo /usr/ports/sunpoet/netcdf4/distinfo --- /usr/ports/sunpoet/netcdf4/../../science/netcdf4/distinfo 2009-09-27 00:44:54.000000000 +0800 +++ /usr/ports/sunpoet/netcdf4/distinfo 2010-04-19 16:17:15.000000000 +0800 @@ -1,3 +1,3 @@ -MD5 (netcdf-4.0.1.tar.gz) = a251453c5477599f050fa4e593295186 -SHA256 (netcdf-4.0.1.tar.gz) = 290e377aa2e9419bb50a2fa1038d6e77d36f239a8a9c3be9e3a9319f1e484d19 -SIZE (netcdf-4.0.1.tar.gz) = 8018998 +MD5 (netcdf-4.1.1.tar.gz) = 79c5ff14c80d5e18dd8f1fceeae1c8e1 +SHA256 (netcdf-4.1.1.tar.gz) = 7933d69d378c57f038375bae4dd78c52442a06e2647fce4b75c13a225e342fb0 +SIZE (netcdf-4.1.1.tar.gz) = 11201096 diff -ruN --exclude=CVS /usr/ports/sunpoet/netcdf4/../../science/netcdf4/files/patch-libsrc4-nc4hdf.c /usr/ports/sunpoet/netcdf4/files/patch-libsrc4-nc4hdf.c --- /usr/ports/sunpoet/netcdf4/../../science/netcdf4/files/patch-libsrc4-nc4hdf.c 2009-01-01 20:19:08.000000000 +0800 +++ /usr/ports/sunpoet/netcdf4/files/patch-libsrc4-nc4hdf.c 1970-01-01 08:00:00.000000000 +0800 @@ -1,12 +0,0 @@ ---- libsrc4/nc4hdf.c.orig 2008-06-10 23:38:34.000000000 +0800 -+++ libsrc4/nc4hdf.c 2008-12-04 00:10:23.755371693 +0800 -@@ -465,6 +465,9 @@ - int need_to_extend = 0, fill_value_recs = 0; - int scalar = 0, retval = NC_NOERR, range_error = 0, i, d2; - void *bufr = NULL; -+#ifdef HDF5_CONVERT -+ H5T_conv_except_func_t except_func; -+#endif - #ifndef HDF5_CONVERT - int need_to_convert = 0; - size_t len = 1; diff -ruN --exclude=CVS /usr/ports/sunpoet/netcdf4/../../science/netcdf4/pkg-plist /usr/ports/sunpoet/netcdf4/pkg-plist --- /usr/ports/sunpoet/netcdf4/../../science/netcdf4/pkg-plist 2009-09-27 17:27:24.000000000 +0800 +++ /usr/ports/sunpoet/netcdf4/pkg-plist 2010-04-21 03:03:17.000000000 +0800 @@ -1,12 +1,39 @@ bin/nc-config +bin/nccopy bin/ncdump bin/ncgen -bin/ncgen4 +bin/ncgen3 +include/ncAtt.h +include/ncByte.h +include/ncChar.h +include/ncCheck.h +include/ncCompoundType.h +include/ncDim.h +include/ncDouble.h +include/ncEnumType.h +include/ncException.h +include/ncFile.h +include/ncFloat.h +include/ncGroup.h +include/ncGroupAtt.h +include/ncInt.h +include/ncInt64.h +include/ncOpaqueType.h +include/ncShort.h +include/ncString.h +include/ncType.h +include/ncUbyte.h +include/ncUint.h +include/ncUint64.h +include/ncUshort.h +include/ncVar.h +include/ncVarAtt.h +include/ncVlenType.h include/ncvalues.h +include/netcdf include/netcdf.h include/netcdf.hh include/netcdfcpp.h -include/netcdfcpp4.h lib/libnetcdf.a lib/libnetcdf.la lib/libnetcdf.so @@ -22,37 +49,40 @@ libdata/pkgconfig/netcdf.pc %%PORTDOCS%%%%DOCSDIR%%/ncdump-man-1.html %%PORTDOCS%%%%DOCSDIR%%/ncgen-man-1.html -%%PORTDOCS%%%%DOCSDIR%%/ncgen4-man-1.html +%%PORTDOCS%%%%DOCSDIR%%/ncgen3-man-1.html %%PORTDOCS%%%%DOCSDIR%%/netcdf-c.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-c.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-c.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-c.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-c.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx.txt -%%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx4.html -%%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx4.pdf -%%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx4.ps -%%PORTDOCS%%%%DOCSDIR%%/netcdf-cxx4.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf-f77.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-f77.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-f77.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-f77.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-f77.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf-f90.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-f90.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-f90.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-f90.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-f90.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf-install.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-install.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-install.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-install.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-install.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf-man-3.html %%PORTDOCS%%%%DOCSDIR%%/netcdf-tutorial.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf-tutorial.info %%PORTDOCS%%%%DOCSDIR%%/netcdf-tutorial.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf-tutorial.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf-tutorial.txt %%PORTDOCS%%%%DOCSDIR%%/netcdf.html +%%PORTDOCS%%%%DOCSDIR%%/netcdf.info %%PORTDOCS%%%%DOCSDIR%%/netcdf.pdf %%PORTDOCS%%%%DOCSDIR%%/netcdf.ps %%PORTDOCS%%%%DOCSDIR%%/netcdf.txt --- netcdf-4.1.1.patch ends here --- >Release-Note: >Audit-Trail: >Unformatted:
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