From owner-freebsd-pkg-fallout@freebsd.org Sat Apr 4 13:01:06 2020 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 06A222AC38A for ; Sat, 4 Apr 2020 13:01:05 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.nyi.freebsd.org (mailman.nyi.freebsd.org [IPv6:2610:1c1:1:606c::50:13]) by mx1.freebsd.org (Postfix) with ESMTP id 48vcPD5Zt7z3QFQ for ; Sat, 4 Apr 2020 13:01:04 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.nyi.freebsd.org (Postfix) id EAD862AC37D; Sat, 4 Apr 2020 13:00:56 +0000 (UTC) Delivered-To: pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id EA0882AC37C for ; Sat, 4 Apr 2020 13:00:56 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 48vcP45Hcwz3QC5 for ; Sat, 4 Apr 2020 13:00:56 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from pylon.nyi.freebsd.org (pylon.nyi.freebsd.org [IPv6:2610:1c1:1:6082::16:fc]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id F213621510 for ; Sat, 4 Apr 2020 12:54:57 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from pylon.nyi.freebsd.org (localhost [127.0.0.1]) by pylon.nyi.freebsd.org (8.15.2/8.15.2) with ESMTP id 034CsvUY060944 for ; Sat, 4 Apr 2020 12:54:57 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by pylon.nyi.freebsd.org (8.15.2/8.15.2/Submit) id 034Csv2x060941; Sat, 4 Apr 2020 12:54:57 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Sat, 4 Apr 2020 12:54:57 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202004041254.034Csv2x060941@pylon.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - head-powerpc64-default][biology/hhsuite] Failed for hhsuite-3.2.0_3 in build X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 04 Apr 2020 13:01:06 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: head/biology/hhsuite/Makefile 528082 2020-03-08 21:56:36Z jbeich $ Log URL: http://pylon.nyi.freebsd.org/data/head-powerpc64-default/p529066_s359288/logs/hhsuite-3.2.0_3.log Build URL: http://pylon.nyi.freebsd.org/build.html?mastername=head-powerpc64-default&build=p529066_s359288 Log: =>> Building biology/hhsuite build started at Sat Apr 4 12:52:40 UTC 2020 port directory: /usr/ports/biology/hhsuite package name: hhsuite-3.2.0_3 building for: FreeBSD head-powerpc64-default-job-09 13.0-CURRENT FreeBSD 13.0-CURRENT 1300085 powerpc maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/biology/hhsuite/Makefile 528082 2020-03-08 21:56:36Z jbeich $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300084 Jail OSVERSION: 1300085 Job Id: 09 !!! Jail is newer than host. (Jail: 1300085, Host: 1300084) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh OSVERSION=1300085 UNAME_v=FreeBSD 13.0-CURRENT 1300085 UNAME_r=13.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/head-powerpc64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM=screen PWD=/usr/local/poudriere/data/.m/head-powerpc64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-powerpc64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-powerpc64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.7" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hhsuite/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hhsuite/work HOME=/wrkdirs/usr/ports/biology/hhsuite/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/hhsuite/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/hhsuite/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/hhsuite/work HOME=/wrkdirs/usr/ports/biology/hhsuite/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/hhsuite/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/biology/hhsuite/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.7m PYTHON_LIBDIR=lib/python3.7 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.7/site-packages PYTHON_SUFFIX=37 PYTHON_VER=3.7 PYTHON_VERSION=python3.7 PYTHON2="@comment " PYTHON3="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.30.2 PERL_VER=5.30 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.30 DOCSDIR="share/doc/hhsuite" EXAMPLESDIR="share/examples/hhsuite" DATADIR="share/hhsuite" WWWDIR="www/hhsuite" ETCDIR="etc/hhsuite" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/hhsuite DOCSDIR=/usr/local/share/doc/hhsuite EXAMPLESDIR=/usr/local/share/examples/hhsuite WWWDIR=/usr/local/www/hhsuite ETCDIR=/usr/local/etc/hhsuite --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=4 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-rc4-5-g52c365aa9ca) Target: powerpc64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-rc4-5-g52c365aa9ca) Target: powerpc64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.0 (git@github.com:llvm/llvm-project.git llvmorg-10.0.0-rc4-5-g52c365aa9ca) Target: powerpc64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=powerpc64 PPC_ABI=ELFv2 OPSYS=FreeBSD _OSRELEASE=13.0-CURRENT OSREL=13.0 OSVERSION=1300085 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License GPLv3 accepted by the user =========================================================================== =================================================== ===> hhsuite-3.2.0_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.13.2.txz [head-powerpc64-default-job-09] Installing pkg-1.13.2... [head-powerpc64-default-job-09] Extracting pkg-1.13.2: .......... done ===> hhsuite-3.2.0_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of hhsuite-3.2.0_3 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by hhsuite-3.2.0_3 for building =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by hhsuite-3.2.0_3 for building => SHA256 Checksum OK for soedinglab-hh-suite-v3.2.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by hhsuite-3.2.0_3 for building ===> Extracting for hhsuite-3.2.0_3 => SHA256 Checksum OK for soedinglab-hh-suite-v3.2.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for hhsuite-3.2.0_3 ===> Applying FreeBSD patches for hhsuite-3.2.0_3 /usr/bin/sed -i.bak -e 's/-msse -msse2/-D_ARCH_PWR8 -DNO_WARN_X86_INTRINSICS -maltivec -mpower8-vector -mvsx/g' /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/CMakeLists.txt =========================================================================== =================================================== ===> hhsuite-3.2.0_3 depends on package: openmpi>0 - not found ===> Installing existing package /packages/All/openmpi-1.10.7_7.txz [head-powerpc64-default-job-09] Installing openmpi-1.10.7_7... [head-powerpc64-default-job-09] `-- Installing gcc9-9.2.0_1... [head-powerpc64-default-job-09] | `-- Installing binutils-2.33.1_2,1... [head-powerpc64-default-job-09] | | `-- Installing gettext-runtime-0.20.1... [head-powerpc64-default-job-09] | | `-- Installing indexinfo-0.3.1... [head-powerpc64-default-job-09] | | `-- Extracting indexinfo-0.3.1: .... done -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py37-gdbm databases/py-gdbm@py37 py37-sqlite3 databases/py-sqlite3@py37 py37-tkinter x11-toolkits/py-tkinter@py37 ===> hhsuite-3.2.0_3 depends on executable: ninja - found ===> Returning to build of hhsuite-3.2.0_3 ===> hhsuite-3.2.0_3 depends on file: /usr/local/bin/python3.7 - found ===> hhsuite-3.2.0_3 depends on package: perl5>=5.30.r1<5.31 - found =========================================================================== =================================================== =========================================================================== =================================================== ===> Configuring for hhsuite-3.2.0_3 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/biology/hhsuite/work/.build -- The C compiler identification is Clang 10.0.0 -- The CXX compiler identification is Clang 10.0.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for fmemopen -- Looking for fmemopen - found -- Found MPI_C: /usr/local/mpi/openmpi/lib/libmpi.so (found version "3.0") -- Found MPI_CXX: /usr/local/mpi/openmpi/lib/libmpi_cxx.so (found version "3.0") -- Found MPI: TRUE (found version "3.0") -- xxd not found, using xxdi.pl instead -- SIMD: HAVE_SSE2 is set -- Found OpenMP_C: -fopenmp=libomp (found version "4.5") -- Found OpenMP_CXX: -fopenmp=libomp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found OpenMP -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BOOST_PYTHON_SUFFIX CMAKE_COLOR_MAKEFILE CMAKE_CXX_FLAGS_DEBUG CMAKE_C_FLAGS_DEBUG CMAKE_MODULE_LINKER_FLAGS CMAKE_SHARED_LINKER_FLAGS CMAKE_VERBOSE_MAKEFILE Python_ADDITIONAL_VERSIONS THREADS_HAVE_PTHREAD_ARG -- Build files have been written to: /wrkdirs/usr/ports/biology/hhsuite/work/.build =========================================================================== =================================================== ===> Building for hhsuite-3.2.0_3 [1/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_from_fasta_with_split.dir/ffindex_from_fasta_with_split.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_from_fasta_with_split.dir/ffindex_from_fasta_with_split.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_from_fasta_with_split.dir/ffindex_from_fasta_with_split.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_from_fasta_with_split.c [2/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_order.dir/ffindex_order.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_order.dir/ffindex_order.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_order.dir/ffindex_order.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_order.c [3/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -UHAVE_MPI -MD -MT lib/ffindex/src/CMakeFiles/ffindex_apply.dir/ffindex_apply_mpi.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_apply.dir/ffindex_apply_mpi.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_apply.dir/ffindex_apply_mpi.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_apply_mpi.c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_apply_mpi.c:172:106: warning: format specifies type 'long long' but the argument has type 'long' [-Wformat] fprintf(log_file_out, "%s\t%ld\t%ld\t%lld\t%d\n", entry->name, entry->offset, entry->length, end - start, WEXITSTATUS(status)); ~~~~ ^~~~~~~~~~~ %ld 1 warning generated. [4/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_modify.dir/ffindex_modify.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_modify.dir/ffindex_modify.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_modify.dir/ffindex_modify.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_modify.c [5/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_get.dir/ffindex_get.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_get.dir/ffindex_get.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_get.dir/ffindex_get.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_get.c [6/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_unpack.dir/ffindex_unpack.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_unpack.dir/ffindex_unpack.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_unpack.dir/ffindex_unpack.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_unpack.c [7/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_build.dir/ffindex_build.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_build.dir/ffindex_build.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_build.dir/ffindex_build.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_build.c [8/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_reduce.dir/ffindex_reduce.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_reduce.dir/ffindex_reduce.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_reduce.dir/ffindex_reduce.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex_reduce.c [9/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex_from_fasta.dir/ffindex_from_fasta.c.o -MF lib/ffindex/src/CMakeFiles/ffindex_from_fasta.dir/ffindex_from_fasta.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex_from_fasta.dir/ffindex_from_fasta.c.o -c 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type 'long' [-Wformat] fprintf(log_file_out, "%s\t%ld\t%ld\t%lld\t%d\n", entry->name, entry->offset, entry->length, end - start, WEXITSTATUS(status)); ~~~~ ^~~~~~~~~~~ %ld 1 warning generated. [11/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex.dir/ffindex.c.o -MF lib/ffindex/src/CMakeFiles/ffindex.dir/ffindex.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex.dir/ffindex.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffindex.c [12/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -MD -MT lib/ffindex/src/CMakeFiles/ffindex.dir/ffutil.c.o -MF lib/ffindex/src/CMakeFiles/ffindex.dir/ffutil.c.o.d -o lib/ffindex/src/CMakeFiles/ffindex.dir/ffutil.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ffutil.c [13/114] : && /usr/local/bin/cmake -E remove lib/ffindex/src/libffindex.a && /usr/bin/ar qc lib/ffindex/src/libffindex.a lib/ffindex/src/CMakeFiles/ffindex.dir/ffindex.c.o lib/ffindex/src/CMakeFiles/ffindex.dir/ffutil.c.o && /usr/bin/ranlib lib/ffindex/src/libffindex.a && : [14/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_from_fasta_with_split.dir/ffindex_from_fasta_with_split.c.o -o lib/ffindex/src/ffindex_from_fasta_with_split lib/ffindex/src/libffindex.a && : [15/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_order.dir/ffindex_order.c.o -o lib/ffindex/src/ffindex_order lib/ffindex/src/libffindex.a && : [16/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_apply.dir/ffindex_apply_mpi.c.o -o lib/ffindex/src/ffindex_apply lib/ffindex/src/libffindex.a && : [17/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_modify.dir/ffindex_modify.c.o -o lib/ffindex/src/ffindex_modify lib/ffindex/src/libffindex.a && : [18/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_get.dir/ffindex_get.c.o -o lib/ffindex/src/ffindex_get lib/ffindex/src/libffindex.a && : [19/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_unpack.dir/ffindex_unpack.c.o -o lib/ffindex/src/ffindex_unpack lib/ffindex/src/libffindex.a && : [20/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_build.dir/ffindex_build.c.o -o lib/ffindex/src/ffindex_build lib/ffindex/src/libffindex.a && : [21/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_reduce.dir/ffindex_reduce.c.o -o lib/ffindex/src/ffindex_reduce lib/ffindex/src/libffindex.a && : [22/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong lib/ffindex/src/CMakeFiles/ffindex_from_fasta.dir/ffindex_from_fasta.c.o -o lib/ffindex/src/ffindex_from_fasta lib/ffindex/src/libffindex.a && : [23/114] /usr/bin/cc -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/ext -I/usr/local/mpi/openmpi/include -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,--enable-new-dtags -pthread -MD -MT lib/ffindex/src/mpq/CMakeFiles/mpq.dir/mpq.c.o -MF lib/ffindex/src/mpq/CMakeFiles/mpq.dir/mpq.c.o.d -o lib/ffindex/src/mpq/CMakeFiles/mpq.dir/mpq.c.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src/mpq/mpq.c cc: warning: -Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9: 'linker' input unused [-Wunused-command-line-argument] cc: warning: -Wl,-rpath: 'linker' input unused [-Wunused-command-line-argument] cc: warning: -Wl,/usr/local/mpi/openmpi/lib: 'linker' input unused [-Wunused-command-line-argument] cc: warning: -Wl,--enable-new-dtags: 'linker' input unused [-Wunused-command-line-argument] [24/114] : && /usr/local/bin/cmake -E remove lib/ffindex/src/mpq/libmpq.a && /usr/bin/ar qc lib/ffindex/src/mpq/libmpq.a lib/ffindex/src/mpq/CMakeFiles/mpq.dir/mpq.c.o && /usr/bin/ranlib lib/ffindex/src/mpq/libmpq.a && : [25/114] : && /usr/bin/cc -std=c99 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wl,-rpath,/usr/local/mpi/openmpi/lib -L/usr/local/mpi/openmpi/lib -lmpi -fstack-protector-strong -Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath -Wl,/usr/local/mpi/openmpi/lib -Wl,--enable-new-dtags -pthread lib/ffindex/src/CMakeFiles/ffindex_apply_mpi.dir/ffindex_apply_mpi.c.o -o lib/ffindex/src/ffindex_apply_mpi -Wl,-rpath,/usr/local/mpi/openmpi/lib: lib/ffindex/src/libffindex.a lib/ffindex/src/mpq/libmpq.a /usr/local/mpi/openmpi/lib/libmpi.so && : [26/114] cd /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/data && mkdir -p /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated && /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/cmake/xxdi.pl context_data.crf > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.crf.h && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.crf.h > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.crf.h.tmp && mv -f /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.crf.h.tmp /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.crf.h [27/114] cd /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/data && mkdir -p /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated && /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/cmake/xxdi.pl context_data.lib > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.lib.h && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.lib.h > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.lib.h.tmp && mv -f /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.lib.h.tmp /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/context_data.lib.h [28/114] cd /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/data && mkdir -p /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated && /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/cmake/xxdi.pl cs219.lib > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/cs219.lib.h && /usr/bin/sed 's!unsigned char!static const unsigned char!' < /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/cs219.lib.h > /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/cs219.lib.h.tmp && mv -f /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/cs219.lib.h.tmp /wrkdirs/usr/ports/biology/hhsuite/work/.build/generated/cs219.lib.h [29/114] /usr/bin/c++ -DOPENMP -DSSE -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -Isrc -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/cs -I/usr/local/mpi/openmpi/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -std=c++0x -D_ARCH_PWR8 -DNO_WARN_X86_INTRINSICS -maltivec -mpower8-vector -mvsx -fopenmp=libomp -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -pthread -DHHALIGN=1 -MD -MT src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o -MF src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o.d -o src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits_mpi.cpp FAILED: src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o /usr/bin/c++ -DOPENMP -DSSE -Igenerated -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/lib/ffindex/src -Isrc -I/wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/cs -I/usr/local/mpi/openmpi/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -std=c++0x -D_ARCH_PWR8 -DNO_WARN_X86_INTRINSICS -maltivec -mpower8-vector -mvsx -fopenmp=libomp -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -pthread -DHHALIGN=1 -MD -MT src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o -MF src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o.d -o src/CMakeFiles/hhalign_mpi.dir/hhblits_mpi.cpp.o -c /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits_mpi.cpp In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits_mpi.cpp:8: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhsearch.h:34: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits.h:37: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/cs/cs.h:59: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/cs/ran.h:24: /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/cs/utils.h:456:10: warning: address of stack memory associated with local variable 'cat' returned [-Wreturn-stack-address] return cat.c_str(); ^~~ In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits_mpi.cpp:8: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhsearch.h:34: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits.h:42: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhdecl.h:18: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/util.h:23: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/simd.h:235: In file included from /usr/lib/clang/10.0.0/include/xmmintrin.h:13: /usr/lib/clang/10.0.0/include/mmintrin.h:33:5: error: use of undeclared identifier '__builtin_ia32_emms'; did you mean '__builtin_isless'? __builtin_ia32_emms(); ^ /usr/include/c++/v1/math.h:651:12: note: '__builtin_isless' declared here return isless(__lcpp_x, __lcpp_y); ^ /usr/include/math.h:120:23: note: expanded from macro 'isless' #define isless(x, y) __builtin_isless((x), (y)) ^ In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits_mpi.cpp:8: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhsearch.h:34: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhblits.h:42: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/hhdecl.h:18: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/util.h:23: In file included from /wrkdirs/usr/ports/biology/hhsuite/work/hh-suite-3.2.0/src/simd.h:235: In file included from /usr/lib/clang/10.0.0/include/xmmintrin.h:13: /usr/lib/clang/10.0.0/include/mmintrin.h:33:25: error: too few arguments to function call, expected 2, have 0 __builtin_ia32_emms(); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:50:19: error: use of undeclared identifier '__builtin_ia32_vec_init_v2si' return (__m64)__builtin_ia32_vec_init_v2si(__i, 0); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:67:12: error: use of undeclared identifier '__builtin_ia32_vec_ext_v2si' return __builtin_ia32_vec_ext_v2si((__v2si)__m, 0); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:129:19: error: use of undeclared identifier '__builtin_ia32_packsswb' return (__m64)__builtin_ia32_packsswb((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:159:19: error: use of undeclared identifier '__builtin_ia32_packssdw' return (__m64)__builtin_ia32_packssdw((__v2si)__m1, (__v2si)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:189:19: error: use of undeclared identifier '__builtin_ia32_packuswb' return (__m64)__builtin_ia32_packuswb((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:216:19: error: use of undeclared identifier '__builtin_ia32_punpckhbw' return (__m64)__builtin_ia32_punpckhbw((__v8qi)__m1, (__v8qi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:239:19: error: use of undeclared identifier '__builtin_ia32_punpckhwd' return (__m64)__builtin_ia32_punpckhwd((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:260:19: error: use of undeclared identifier '__builtin_ia32_punpckhdq' return (__m64)__builtin_ia32_punpckhdq((__v2si)__m1, (__v2si)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:287:19: error: use of undeclared identifier '__builtin_ia32_punpcklbw' return (__m64)__builtin_ia32_punpcklbw((__v8qi)__m1, (__v8qi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:310:19: error: use of undeclared identifier '__builtin_ia32_punpcklwd' return (__m64)__builtin_ia32_punpcklwd((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:331:19: error: use of undeclared identifier '__builtin_ia32_punpckldq' return (__m64)__builtin_ia32_punpckldq((__v2si)__m1, (__v2si)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:352:19: error: use of undeclared identifier '__builtin_ia32_paddb' return (__m64)__builtin_ia32_paddb((__v8qi)__m1, (__v8qi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:373:19: error: use of undeclared identifier '__builtin_ia32_paddw' return (__m64)__builtin_ia32_paddw((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:394:19: error: use of undeclared identifier '__builtin_ia32_paddd' return (__m64)__builtin_ia32_paddd((__v2si)__m1, (__v2si)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:416:19: error: use of undeclared identifier '__builtin_ia32_paddsb' return (__m64)__builtin_ia32_paddsb((__v8qi)__m1, (__v8qi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:439:19: error: use of undeclared identifier '__builtin_ia32_paddsw' return (__m64)__builtin_ia32_paddsw((__v4hi)__m1, (__v4hi)__m2); ^ /usr/lib/clang/10.0.0/include/mmintrin.h:461:19: error: use of undeclared identifier '__builtin_ia32_paddusb' return (__m64)__builtin_ia32_paddusb((__v8qi)__m1, (__v8qi)__m2); ^ fatal error: too many errors emitted, stopping now [-ferror-limit=] 1 warning and 20 errors generated. ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/biology/hhsuite