Date: Thu, 5 Jul 2007 22:28:19 GMT From: Federico Gálvez-Durand <federicogalvezdurand@yahoo.com> To: freebsd-gnats-submit@FreeBSD.org Subject: ports/114344: ports/science/afni broken Message-ID: <200707052228.l65MSJta033995@www.freebsd.org> Resent-Message-ID: <200707052230.l65MU2GU024818@freefall.freebsd.org>
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>Number: 114344
>Category: ports
>Synopsis: ports/science/afni broken
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: sw-bug
>Submitter-Id: current-users
>Arrival-Date: Thu Jul 05 22:30:02 GMT 2007
>Closed-Date:
>Last-Modified:
>Originator: Federico Gálvez-Durand
>Release: i386 6.2
>Organization:
UFRJ
>Environment:
FreeBSD trinity.local 6.2-RELEASE-p1 FreeBSD 6.2-RELEASE-p1 #0: Fri Feb 16 13:51:49 UTC 2007 root@trinity.local:/usr/obj/usr/src/sys/TRINITY i386
>Description:
ports/science/afni compiles but with several pieces left out because of compiling errors involving glwMDrawingAreaWidgetClass not longer present in xorg 7.2 libGLw.so.
>How-To-Repeat:
compile ports/science/afni and observe that the following programs fail to compile:
cp: SUMA/suma: No such file or directory
cp: SUMA/AnalyzeTrace: No such file or directory
cp: SUMA/SurfInfo: No such file or directory
cp: SUMA/SurfDsetInfo: No such file or directory
cp: SUMA/ROIgrow: No such file or directory
cp: SUMA/SurfToSurf: No such file or directory
cp: SUMA/3dSurfMask: No such file or directory
cp: SUMA/3dBRAIN_VOYAGERtoAFNI: No such file or directory
cp: SUMA/3dCRUISEtoAFNI: No such file or directory
cp: SUMA/3dSkullStrip: No such file or directory
cp: SUMA/SampBias: No such file or directory
cp: SUMA/SUMA_paperplane: No such file or directory
cp: SUMA/SurfSmooth: No such file or directory
cp: SUMA/SurfQual: No such file or directory
cp: SUMA/SurfPatch: No such file or directory
cp: SUMA/FSread_annot: No such file or directory
cp: SUMA/quickspec: No such file or directory
cp: SUMA/inspec: No such file or directory
cp: SUMA/SurfaceMetrics: No such file or directory
cp: SUMA/SUMA_pixmap2eps: No such file or directory
cp: SUMA/ConvexHull: No such file or directory
cp: SUMA/IsoSurface: No such file or directory
cp: SUMA/SurfClust: No such file or directory
cp: SUMA/ConvertDset: No such file or directory
cp: SUMA/ConvertSurface: No such file or directory
cp: SUMA/CompareSurfaces: No such file or directory
cp: SUMA/CreateIcosahedron: No such file or directory
cp: SUMA/MapIcosahedron: No such file or directory
cp: SUMA/ScaleToMap: No such file or directory
cp: SUMA/SurfMeasures: No such file or directory
cp: SUMA/3dSurf2Vol: No such file or directory
cp: SUMA/3dVol2Surf: No such file or directory
cp: SUMA/ROI2dataset: No such file or directory
cp: SUMA/MakeColorMap: No such file or directory
cp: SUMA/DriveSuma: No such file or directory
>Fix:
1) apply patch for files/Makefile.FreeBSD_PORT
--- files/Makefile.FreeBSD_PORT.orig Thu Jul 5 02:05:43 2007
+++ files/Makefile.FreeBSD_PORT Thu Jul 5 02:06:03 2007
@@ -45,7 +45,7 @@
LD? = ${CC}
CCDEBS = -DAFNI_DEBUG -DIMSEQ_DEBUG -DDISPLAY_DEBUG -DTHD_DEBUG
-CEXTRA = -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE -DSUMA_MOTIF_GLXAREA
+CEXTRA = -DFreeBSD -DNO_GAMMA -DUSE_TRACING -DHAVE_XDBE
ifeq (${ARCH}, amd64)
CEXTRA += -DPIC -fPIC
endif
2) create patch for SUMA/SUMA_paperplane.c (# cat files/patch-SUMA-SUMA_paperplane.c)
--- SUMA/SUMA_paperplane.c.orig Wed Sep 21 17:45:43 2005
+++ SUMA/SUMA_paperplane.c Thu Jul 5 23:54:45 2007
@@ -31,10 +31,10 @@
#ifdef noGLwidget
#include <Xm/DrawingA.h> /* Motif drawing area widget */
#else
-#ifdef noMotifGLwidget
-#include <GL/GLwDrawA.h> /* Pure Xt OpenGL drawing area widget. */
-#else
+#ifdef SUMA_MOTIF_GLXAREA
#include <GL/GLwMDrawA.h> /* Motif OpenGL drawing area widget. */
+#else
+#include <GL/GLwDrawA.h> /* Pure Xt OpenGL drawing area widget. */
#endif
#endif
@@ -386,14 +386,14 @@
glxarea = XtVaCreateManagedWidget("glxarea",
xmDrawingAreaWidgetClass, frame, NULL);
#else
-#ifdef noMotifGLwidget
- /* notice glwDrawingAreaWidgetClass lacks an 'M' */
+#ifdef SUMA_MOTIF_GLXAREA
glxarea = XtVaCreateManagedWidget("glxarea",
- glwDrawingAreaWidgetClass, frame,
+ glwMDrawingAreaWidgetClass, frame,
GLwNvisualInfo, vi, NULL);
#else
+ /* notice glwDrawingAreaWidgetClass lacks an 'M' */
glxarea = XtVaCreateManagedWidget("glxarea",
- glwMDrawingAreaWidgetClass, frame,
+ glwDrawingAreaWidgetClass, frame,
GLwNvisualInfo, vi, NULL);
#endif
#endif
>Release-Note:
>Audit-Trail:
>Unformatted:
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