Date: Sat, 12 Feb 2011 18:44:27 +0100 (CET) From: Thierry Thomas <thierry@FreeBSD.org> To: FreeBSD-gnats-submit@FreeBSD.org Cc: maho@FreeBSD.org, oliver@FreeBSD.org Subject: ports/154715: net/mpich2: chase the upgrade of MPICH2 Message-ID: <20110212174427.A358E1147F@graf.pompo.net> Resent-Message-ID: <201102121750.p1CHo8Hp025149@freefall.freebsd.org>
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>Number: 154715 >Category: ports >Synopsis: net/mpich2: chase the upgrade of MPICH2 >Confidential: no >Severity: non-critical >Priority: medium >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: update >Submitter-Id: current-users >Arrival-Date: Sat Feb 12 17:50:07 UTC 2011 >Closed-Date: >Last-Modified: >Originator: Thierry Thomas >Release: FreeBSD 8.1-STABLE i386 >Organization: Kabbale Eros >Environment: N/A. >Description: Chase the upgrade of MPICH2. See PR ports/154714. >How-To-Repeat: N/A >Fix: Apply the hereunder patches. --- blacs.diff begins here --- diff -urN math/blacs.orig/Makefile math/blacs/Makefile --- math/blacs.orig/Makefile 2010-11-14 23:00:15.000000000 +0100 +++ math/blacs/Makefile 2011-02-06 22:24:53.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= blacs PORTVERSION= 1.7 -PORTREVISION= 13 +PORTREVISION= 14 CATEGORIES= math MASTER_SITES= ftp://ftp.netlib.org/blacs/ DISTNAME= BLACS --- blacs.diff ends here --- --- mbdyn.diff begins here --- diff -urN science/mbdyn.orig/Makefile science/mbdyn/Makefile --- science/mbdyn.orig/Makefile 2010-11-14 23:00:15.000000000 +0100 +++ science/mbdyn/Makefile 2011-02-06 22:27:40.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= mbdyn PORTVERSION= 1.3.9 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= science MASTER_SITES= http://www.aero.polimi.it/~masarati/Download/mbdyn/ --- mbdyn.diff ends here --- --- mpqc.diff begins here --- diff -urN science/mpqc.orig/Makefile science/mpqc/Makefile --- science/mpqc.orig/Makefile 2010-12-30 19:13:56.000000000 +0100 +++ science/mpqc/Makefile 2011-02-06 22:29:50.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= mpqc PORTVERSION= 2.3.1 -PORTREVISION= 13 +PORTREVISION= 14 CATEGORIES= science parallel MASTER_SITES= SF --- mpqc.diff ends here --- --- hpl.diff begins here --- diff -urN benchmarks/hpl.orig/Makefile benchmarks/hpl/Makefile --- benchmarks/hpl.orig/Makefile 2010-11-14 23:00:16.000000000 +0100 +++ benchmarks/hpl/Makefile 2011-02-06 22:32:57.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= hpl PORTVERSION= 2.0 -PORTREVISION= 7 +PORTREVISION= 8 CATEGORIES= benchmarks MASTER_SITES= http://www.netlib.org/benchmark/hpl/ --- hpl.diff ends here --- --- mumps.diff begins here --- diff -urN math/mumps.orig/Makefile math/mumps/Makefile --- math/mumps.orig/Makefile 2010-11-15 00:00:33.000000000 +0100 +++ math/mumps/Makefile 2011-02-06 22:41:27.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= mumps PORTVERSION= 4.8.4 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= math MASTER_SITES= http://mumps.enseeiht.fr/ \ http://graal.ens-lyon.fr/MUMPS/ \ diff -urN math/mumps.orig/distinfo math/mumps/distinfo --- math/mumps.orig/distinfo 2010-01-01 17:09:44.000000000 +0100 +++ math/mumps/distinfo 2011-02-06 22:42:46.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (MUMPS_4.8.4.tar.gz) = 4b80e8ecff2b43473dc885b0b7120313 SHA256 (MUMPS_4.8.4.tar.gz) = cda022a12ce632ae753dcffc06411b2569647fafa01db947cc6a280d465acb2d SIZE (MUMPS_4.8.4.tar.gz) = 2007524 --- mumps.diff ends here --- --- scotch.diff begins here --- diff -urN cad/scotch.orig/Makefile cad/scotch/Makefile --- cad/scotch.orig/Makefile 2010-03-01 20:53:26.000000000 +0100 +++ cad/scotch/Makefile 2011-02-06 22:44:27.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= scotch PORTVERSION= 5.0.6 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= cad science MASTER_SITES= http://gforge.inria.fr/frs/download.php/3795/ DISTNAME= ${PORTNAME}_${PORTVERSION} diff -urN cad/scotch.orig/distinfo cad/scotch/distinfo --- cad/scotch.orig/distinfo 2008-07-13 09:42:49.000000000 +0200 +++ cad/scotch/distinfo 2011-02-06 22:45:31.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (scotch_5.0.6.tar.gz) = 197f5eb413f619fef30546c6e4da1c73 SHA256 (scotch_5.0.6.tar.gz) = 53e5d8bc79b37c025ca3e6c036f58ad75cf2672e937d6c9ce4b7a29f6ef711b7 SIZE (scotch_5.0.6.tar.gz) = 3433705 --- scotch.diff ends here --- --- petsc.diff begins here --- diff -urN math/petsc.orig/Makefile math/petsc/Makefile --- math/petsc.orig/Makefile 2010-11-14 23:00:22.000000000 +0100 +++ math/petsc/Makefile 2011-02-06 22:53:31.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= petsc DISTVERSION= 2.3.3-p0 -PORTREVISION= 5 +PORTREVISION= 6 PORTEPOCH= 1 CATEGORIES= math parallel MASTER_SITES= ftp://ftp.mcs.anl.gov/pub/petsc/release-snapshots/ diff -urN math/petsc.orig/distinfo math/petsc/distinfo --- math/petsc.orig/distinfo 2007-05-26 23:51:45.000000000 +0200 +++ math/petsc/distinfo 2011-02-06 22:55:22.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (petsc-2.3.3-p0.tar.gz) = 040475e8e7bacc126053537e3b3cdbc3 SHA256 (petsc-2.3.3-p0.tar.gz) = a08d0f2022349321a26ae6c63f0ad5b069d37f48028377c549b81cc3e7b97ddf SIZE (petsc-2.3.3-p0.tar.gz) = 10966078 --- petsc.diff ends here --- --- sdpara.diff begins here --- diff -urN math/sdpara.orig/Makefile math/sdpara/Makefile --- math/sdpara.orig/Makefile 2010-11-15 00:00:37.000000000 +0100 +++ math/sdpara/Makefile 2011-02-06 22:56:42.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= sdpara PORTVERSION= 7.2.1 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math parallel MASTER_SITES= http://sdpa.indsys.chuo-u.ac.jp/sdpa/files/ DISTFILES= ${SRCFILE}#${MANUALFILE} --- sdpara.diff ends here --- --- fvm.diff begins here --- diff -urN science/fvm.orig/Makefile science/fvm/Makefile --- science/fvm.orig/Makefile 2010-11-14 23:00:23.000000000 +0100 +++ science/fvm/Makefile 2011-02-06 22:58:50.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= fvm PORTVERSION= 0.12.0 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= science parallel MASTER_SITES= http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} diff -urN science/fvm.orig/distinfo science/fvm/distinfo --- science/fvm.orig/distinfo 2009-01-25 17:18:43.000000000 +0100 +++ science/fvm/distinfo 2011-02-06 22:59:07.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (fvm-0120.tgz) = 9a7440c6f4aa093174c794a053e6d518 SHA256 (fvm-0120.tgz) = 92bd5210ce59684d71d75ae0a4f08fae947a03195f9dfe2617ed97535ccbdd2f SIZE (fvm-0120.tgz) = 721797 --- fvm.diff ends here --- --- ncs.diff begins here --- diff -urN science/ncs.orig/Makefile science/ncs/Makefile --- science/ncs.orig/Makefile 2010-11-14 23:00:23.000000000 +0100 +++ science/ncs/Makefile 2011-02-06 23:01:12.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= ncs PORTVERSION= 1.3.3 -PORTREVISION= 6 +PORTREVISION= 7 CATEGORIES= science parallel MASTER_SITES= http://rd.edf.com/fichiers/fckeditor/File/EDF%20RD/Code_Saturne/Fichiers/ DISTNAME= ${PORTNAME}-${PORTVERSION:S/.//g} diff -urN science/ncs.orig/distinfo science/ncs/distinfo --- science/ncs.orig/distinfo 2009-01-25 17:21:04.000000000 +0100 +++ science/ncs/distinfo 2011-02-06 23:01:26.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (ncs-133.tgz) = 1267079f8079ca0fac6210205a9cb2a7 SHA256 (ncs-133.tgz) = 7cec5ab535aca3eed8b8bb5e410a3f01db3ce40cfd3090a6727f7c048f8ee41f SIZE (ncs-133.tgz) = 12138504 --- ncs.diff ends here --- --- imb.diff begins here --- diff -urN benchmarks/imb.orig/Makefile benchmarks/imb/Makefile --- benchmarks/imb.orig/Makefile 2010-11-14 23:53:14.000000000 +0100 +++ benchmarks/imb/Makefile 2011-02-06 23:04:01.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= imb PORTVERSION= 3.0 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= benchmarks parallel MASTER_SITES= ${MASTER_SITE_LOCAL} \ http://cache-www.intel.com/cd/00/00/32/71/ diff -urN benchmarks/imb.orig/distinfo benchmarks/imb/distinfo --- benchmarks/imb.orig/distinfo 2006-11-20 22:26:53.000000000 +0100 +++ benchmarks/imb/distinfo 2011-02-06 23:04:34.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (327191_327191.gz) = 4e65d46aaf30d12cdeaf898df5693cdc SHA256 (327191_327191.gz) = 5014ec12ae5dc05b1373b47b41d26fe518bc41fe5c77899eb400a25dd9c3ec53 SIZE (327191_327191.gz) = 464188 --- imb.diff ends here --- --- mdtest.diff begins here --- diff -urN benchmarks/mdtest.orig/Makefile benchmarks/mdtest/Makefile --- benchmarks/mdtest.orig/Makefile 2010-01-01 17:07:12.000000000 +0100 +++ benchmarks/mdtest/Makefile 2011-02-06 23:06:04.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= mdtest PORTVERSION= 1.7.1 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= benchmarks MASTER_SITES= http://www.llnl.gov/icc/lc/siop/downloads/ diff -urN benchmarks/mdtest.orig/distinfo benchmarks/mdtest/distinfo --- benchmarks/mdtest.orig/distinfo 2007-04-30 09:10:51.000000000 +0200 +++ benchmarks/mdtest/distinfo 2011-02-06 23:06:13.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (mdtest-1.7.1.tar.gz) = 4ea34d1f9d0c498e47edf694a3962e9b SHA256 (mdtest-1.7.1.tar.gz) = 1ebe974d1c275c2abb9ab06a09506ab908718f2e6a73780956d0a89db40c3024 SIZE (mdtest-1.7.1.tar.gz) = 11344 --- mdtest.diff ends here --- --- blocksolve95.diff begins here --- diff -urN math/blocksolve95.orig/Makefile math/blocksolve95/Makefile --- math/blocksolve95.orig/Makefile 2010-01-01 17:09:41.000000000 +0100 +++ math/blocksolve95/Makefile 2011-02-06 23:08:15.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= blocksolve95 PORTVERSION= 3.0 -PORTREVISION= 9 +PORTREVISION= 10 CATEGORIES= math parallel MASTER_SITES= ftp://info.mcs.anl.gov/pub/BlockSolve95/ \ ftp://ftp.irisa.fr/pub/mirrors/BlockSolve95/ diff -urN math/blocksolve95.orig/distinfo math/blocksolve95/distinfo --- math/blocksolve95.orig/distinfo 2005-11-25 16:47:58.000000000 +0100 +++ math/blocksolve95/distinfo 2011-02-06 23:08:45.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (blocksolve95-3.0/BlockSolve95.tar.Z) = 8b7cc41f0fe6e9a7b53ab0f4697b7cae SHA256 (blocksolve95-3.0/BlockSolve95.tar.Z) = d615b534959a798297d24a9cad6f407d1b82eae874b784f774e60a3f2ff43c42 SIZE (blocksolve95-3.0/BlockSolve95.tar.Z) = 655906 --- blocksolve95.diff ends here --- --- parmetis.diff begins here --- diff -urN math/parmetis.orig/Makefile math/parmetis/Makefile --- math/parmetis.orig/Makefile 2010-01-01 17:09:45.000000000 +0100 +++ math/parmetis/Makefile 2011-02-06 23:09:53.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= ParMetis PORTVERSION= 3.1 -PORTREVISION= 5 +PORTREVISION= 6 CATEGORIES= math parallel MASTER_SITES= http://glaros.dtc.umn.edu/gkhome/fetch/sw/parmetis/ diff -urN math/parmetis.orig/distinfo math/parmetis/distinfo --- math/parmetis.orig/distinfo 2006-01-22 13:56:40.000000000 +0100 +++ math/parmetis/distinfo 2011-02-06 23:10:03.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (ParMetis-3.1.tar.gz) = 15f252eabc397a8c2f56fa1f5ed91354 SHA256 (ParMetis-3.1.tar.gz) = 11485828fe25436dc6d41cb048bc4b744969b51d4b751996007612aa95d5ff16 SIZE (ParMetis-3.1.tar.gz) = 5286085 --- parmetis.diff ends here --- --- pnetcdf.diff begins here --- diff -urN science/pnetcdf.orig/Makefile science/pnetcdf/Makefile --- science/pnetcdf.orig/Makefile 2010-09-20 18:50:39.000000000 +0200 +++ science/pnetcdf/Makefile 2011-02-06 23:12:49.000000000 +0100 @@ -7,6 +7,7 @@ PORTNAME= pnetcdf PORTVERSION= 1.2.0 +PORTREVISION= 1 CATEGORIES= science parallel MASTER_SITES= http://ftp.mcs.anl.gov/pub/parallel-netcdf/ DISTNAME= parallel-netcdf-${PORTVERSION} diff -urN science/pnetcdf.orig/distinfo science/pnetcdf/distinfo --- science/pnetcdf.orig/distinfo 2010-09-20 18:50:39.000000000 +0200 +++ science/pnetcdf/distinfo 2011-02-06 23:12:58.000000000 +0100 @@ -1,3 +1,2 @@ -MD5 (parallel-netcdf-1.2.0.tar.bz2) = 81db6427cb23086282db3a004e677b49 SHA256 (parallel-netcdf-1.2.0.tar.bz2) = 5d2daea06e7786bd0e17499d508776113da3090250e1d3154f4a50025442e71f SIZE (parallel-netcdf-1.2.0.tar.bz2) = 4654087 --- pnetcdf.diff ends here --- --- scalapack.diff begins here --- diff -urN math/scalapack.orig/Makefile math/scalapack/Makefile --- math/scalapack.orig/Makefile 2010-01-01 17:09:45.000000000 +0100 +++ math/scalapack/Makefile 2011-02-06 23:15:05.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= scalapack PORTVERSION= 1.8.0 -PORTREVISION= 4 +PORTREVISION= 5 CATEGORIES= math MASTER_SITES= ftp://ftp.netlib.org/scalapack/ DISTFILES= scalapack-${PORTVERSION}.tgz manpages.tgz --- scalapack.diff ends here --- --- spooles.diff begins here --- diff -urN math/spooles.orig/Makefile math/spooles/Makefile --- math/spooles.orig/Makefile 2010-01-01 17:09:45.000000000 +0100 +++ math/spooles/Makefile 2011-02-06 23:17:14.000000000 +0100 @@ -7,7 +7,7 @@ PORTNAME= spooles PORTVERSION= 2.2 -PORTREVISION= 8 +PORTREVISION= 9 CATEGORIES= math MASTER_SITES= http://www.netlib.org/linalg/spooles/ .ifdef WITH_MPI --- spooles.diff ends here --- >Release-Note: >Audit-Trail: >Unformatted:
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