Date: Fri, 11 Nov 2016 06:19:10 +0000 (UTC) From: Kurt Jaeger <pi@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r425863 - in head/biology/seqtools: . files Message-ID: <201611110619.uAB6JAH3058837@repo.freebsd.org>
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Author: pi Date: Fri Nov 11 06:19:10 2016 New Revision: 425863 URL: https://svnweb.freebsd.org/changeset/ports/425863 Log: biology/seqtools: update 4.43.0 -> 4.44.1 - Blixem: Features can now be added to multiple different groups/filters. - Belvu: Fix a problem where column highlighting can get out of sync with the text. Added: head/biology/seqtools/files/ head/biology/seqtools/files/patch-gbtools_src_blatSrc_lib_gff3.c (contents, props changed) Modified: head/biology/seqtools/Makefile head/biology/seqtools/distinfo Modified: head/biology/seqtools/Makefile ============================================================================== --- head/biology/seqtools/Makefile Fri Nov 11 06:09:12 2016 (r425862) +++ head/biology/seqtools/Makefile Fri Nov 11 06:19:10 2016 (r425863) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= seqtools -PORTVERSION= 4.43.0 +PORTVERSION= 4.44.1 CATEGORIES= biology MASTER_SITES= ftp://ftp.sanger.ac.uk/pub4/resources/software/seqtools/PRODUCTION/ Modified: head/biology/seqtools/distinfo ============================================================================== --- head/biology/seqtools/distinfo Fri Nov 11 06:09:12 2016 (r425862) +++ head/biology/seqtools/distinfo Fri Nov 11 06:19:10 2016 (r425863) @@ -1,3 +1,3 @@ -TIMESTAMP = 1469510431 -SHA256 (seqtools-4.43.0.tar.gz) = 01861098451eab001d49a039e60ddc6df22a61a7472924c850942ffdae396c8b -SIZE (seqtools-4.43.0.tar.gz) = 6862548 +TIMESTAMP = 1478810582 +SHA256 (seqtools-4.44.1.tar.gz) = 0e1dd7087d1180e434f0ea1aac21b8dfb5261195581ec3ba012abf0d1e39daa9 +SIZE (seqtools-4.44.1.tar.gz) = 6922888 Added: head/biology/seqtools/files/patch-gbtools_src_blatSrc_lib_gff3.c ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/seqtools/files/patch-gbtools_src_blatSrc_lib_gff3.c Fri Nov 11 06:19:10 2016 (r425863) @@ -0,0 +1,10 @@ +--- gbtools/src/blatSrc/lib/gff3.c.orig 2016-11-10 21:14:27 UTC ++++ gbtools/src/blatSrc/lib/gff3.c +@@ -7,6 +7,7 @@ + /* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + #include "common.h" ++#include "dnaseq.h" + #include "gff3.h" + #include <limits.h> + #include "errAbort.h"
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