From owner-freebsd-pkg-fallout@freebsd.org Sat Jan 18 11:54:40 2020 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 7823F1F1FB5 for ; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.nyi.freebsd.org (unknown [127.0.1.3]) by mx1.freebsd.org (Postfix) with ESMTP id 480GZ83PRpz3PW4 for ; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.nyi.freebsd.org (Postfix) id 72FC11F1FB4; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) Delivered-To: pkg-fallout@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id 72B521F1FB3 for ; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 480GZ83CJzz3PW3; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from package19.nyi.freebsd.org (package19.nyi.freebsd.org [IPv6:2610:1c1:1:6082::16:f5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 64EBB218FF; Sat, 18 Jan 2020 11:54:40 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from package19.nyi.freebsd.org (localhost [127.0.0.1]) by package19.nyi.freebsd.org (8.15.2/8.15.2) with ESMTP id 00IBseOl044685; Sat, 18 Jan 2020 11:54:40 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by package19.nyi.freebsd.org (8.15.2/8.15.2/Submit) id 00IBseYu044659; Sat, 18 Jan 2020 11:54:40 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Sat, 18 Jan 2020 11:54:40 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202001181154.00IBseYu044659@package19.nyi.freebsd.org> To: yuri@FreeBSD.org Subject: [exp - 120amd64-default-build-as-user][science/gromacs] Failed for gromacs-2020 in build Cc: pkg-fallout@FreeBSD.org X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 18 Jan 2020 11:54:40 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/gromacs/Makefile 522739 2020-01-12 01:13:06Z yuri $ Log URL: http://package19.nyi.freebsd.org/data/120amd64-default-build-as-user/523265/logs/gromacs-2020.log Build URL: http://package19.nyi.freebsd.org/build.html?mastername=120amd64-default-build-as-user&build=523265 Log: =>> Building science/gromacs build started at Sat Jan 18 11:53:15 UTC 2020 port directory: /usr/ports/science/gromacs package name: gromacs-2020 building for: FreeBSD 120amd64-default-build-as-user-job-13 12.0-RELEASE-p12 FreeBSD 12.0-RELEASE-p12 amd64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/gromacs/Makefile 522739 2020-01-12 01:13:06Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300062 Jail OSVERSION: 1200086 Job Id: 13 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1200086 UNAME_v=FreeBSD 12.0-RELEASE-p12 UNAME_r=12.0-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/poudriere/data/.m/120amd64-default-build-as-user/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= GID=0 UID=0 PWD=/poudriere/data/.m/120amd64-default-build-as-user/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=120amd64-default-build-as-user SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/poudriere/data/.m/120amd64-default-build-as-user/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for gromacs-2020: ATLAS=off: Use ATLAS for BLAS and LAPACK FLOAT=on: Use single instead of double precision OPENCL=off: Heterogeneous computing via OpenCL OPENMP=on: Parallel processing support via OpenMP SIMD=off: Use CPU-specific optimizations X11=on: X11 (graphics) support ====> Multiprocessing: you have to select exactly one of them NOMP=off: No multiprocessing support MPICH=off: Parallel processing support via MPICH OPENMPI=off: Parallel processing support via Open MPI THREAD_MPI=on: Build a thread-MPI-based multithreaded version of GROMACS ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/gromacs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/gromacs/work 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"/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: x86_64-unknown-freebsd12.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=12.0-RELEASE-p12 OSREL=12.0 OSVERSION=1200086 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License LGPL21 accepted by the user =========================================================================== =================================================== ===> gromacs-2020 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.12.0.txz [120amd64-default-build-as-user-job-13] Installing pkg-1.12.0... [120amd64-default-build-as-user-job-13] Extracting pkg-1.12.0: .......... done ===> gromacs-2020 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of gromacs-2020 =========================================================================== =================================================== =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-2020 for building =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-2020 for building => SHA256 Checksum OK for gromacs-2020.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by gromacs-2020 for building ===> Extracting for gromacs-2020 => SHA256 Checksum OK for gromacs-2020.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for gromacs-2020 ===> Applying FreeBSD patches for gromacs-2020 =========================================================================== =================================================== ===> gromacs-2020 depends on package: boost-libs>=1.44 - not found ===> Installing existing package /packages/All/boost-libs-1.72.0.txz [120amd64-default-build-as-user-job-13] Installing boost-libs-1.72.0... [120amd64-default-build-as-user-job-13] `-- Installing icu-65.1,1... [120amd64-default-build-as-user-job-13] `-- Extracting icu-65.1,1: .......... done [120amd64-default-build-as-user-job-13] Extracting boost-libs-1.72.0: .......... done ===== Message from boost-libs-1.72.0: -- cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/collective.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/profile.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/comm.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/reduce.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/event.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/reduce_fast.cpp [ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/gather.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/scatter.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/group.cpp [ 5%] Building CXX object 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-I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/topology.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/list.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/type.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/scan.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/numa_malloc.cpp [ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/once.cpp [ 5%] Built target thread_mpi /usr/bin/make -f src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/build.make src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/depend cd /wrkdirs/usr/ports/science/gromacs/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020 /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra /wrkdirs/usr/ports/science/gromacs/work/.build /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake Scanning dependencies of target linearalgebra /usr/bin/make -f 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/wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/gmx_arpack.cpp [ 5%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/matrix.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/matrix.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/matrix.cpp [ 5%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/nrjac.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/nrjac.cpp [ 5%] Building CXX object src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/sparsematrix.cpp [ 5%] Built target linearalgebra /usr/bin/make -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend cd /wrkdirs/usr/ports/science/gromacs/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020 /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator /wrkdirs/usr/ports/science/gromacs/work/.build /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake Scanning dependencies of target modularsimulator /usr/bin/make -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/checkpointhelper.cpp [ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/compositesimulatorelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/computeglobalselement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/constraintelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/domdechelper.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energyelement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/energyelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/energyelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/forceelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/forceelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationelement.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/freeenergyperturbationelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/freeenergyperturbationelement.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/modularsimulator.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/parrinellorahmanbarostat.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp [ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/propagator.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR); ^~~~~~ /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator::run' requested here run(); ^ 18 errors generated. *** Error code 1 Stop. make[3]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build *** Error code 1 Stop. make[2]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build *** Error code 1 Stop. make[1]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build *** Error code 1 Stop. make: stopped in /usr/ports/science/gromacs