Date: Sat, 5 Apr 2014 10:56:52 +0000 (UTC) From: Wen Heping <wen@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r350214 - head/biology/paml Message-ID: <201404051056.s35AuqfF035760@svn.freebsd.org>
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Author: wen Date: Sat Apr 5 10:56:52 2014 New Revision: 350214 URL: http://svnweb.freebsd.org/changeset/ports/350214 QAT: https://qat.redports.org/buildarchive/r350214/ Log: - Update to 4.8 - Reset maintainer to ports@ Modified: head/biology/paml/Makefile head/biology/paml/distinfo head/biology/paml/pkg-plist Modified: head/biology/paml/Makefile ============================================================================== --- head/biology/paml/Makefile Sat Apr 5 10:42:18 2014 (r350213) +++ head/biology/paml/Makefile Sat Apr 5 10:56:52 2014 (r350214) @@ -2,20 +2,21 @@ # $FreeBSD$ PORTNAME= paml -PORTVERSION= 4.4c +PORTVERSION= 4.8 CATEGORIES= biology MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/ DISTNAME= ${PORTNAME}${PORTVERSION} +EXTRACT_SUFX= .tgz -MAINTAINER= wen@FreeBSD.org +MAINTAINER= ports@FreeBSD.org COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) USES= gmake -WRKSRC= ${WRKDIR}/${PORTNAME}44/src +WRKSRC= ${WRKDIR}/${PORTNAME}${PORTVERSION}/src MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" BINARIES= baseml basemlg chi2 codeml evolver pamp yn00 -DOC_FILES= MCMCtreeDoc.pdf pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt +DOC_FILES= pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt OPTIONS_DEFINE= DOCS @@ -25,7 +26,7 @@ do-install: .endfor @${MKDIR} ${STAGEDIR}${DOCSDIR} .for f in ${DOC_FILES} - ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}44/doc/${f} ${STAGEDIR}${DOCSDIR} + ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}${PORTVERSION}/doc/${f} ${STAGEDIR}${DOCSDIR} .endfor .include <bsd.port.mk> Modified: head/biology/paml/distinfo ============================================================================== --- head/biology/paml/distinfo Sat Apr 5 10:42:18 2014 (r350213) +++ head/biology/paml/distinfo Sat Apr 5 10:56:52 2014 (r350214) @@ -1,2 +1,2 @@ -SHA256 (paml4.4c.tar.gz) = 08aad25b6b06a359d4f2f12a60ea601c95694864d5f29f7028f67b80890974d6 -SIZE (paml4.4c.tar.gz) = 2891715 +SHA256 (paml4.8.tgz) = 67498283308824cd5a3986db382bec275432e817f6719b8faf99fa2509f32781 +SIZE (paml4.8.tgz) = 4835110 Modified: head/biology/paml/pkg-plist ============================================================================== --- head/biology/paml/pkg-plist Sat Apr 5 10:42:18 2014 (r350213) +++ head/biology/paml/pkg-plist Sat Apr 5 10:56:52 2014 (r350214) @@ -6,7 +6,6 @@ bin/evolver bin/pamp bin/yn00 %%PORTDOCS%%%%DOCSDIR%%/pamlDOC.pdf -%%PORTDOCS%%%%DOCSDIR%%/MCMCtreeDoc.pdf %%PORTDOCS%%%%DOCSDIR%%/pamlFAQs.pdf %%PORTDOCS%%%%DOCSDIR%%/pamlHistory.txt %%PORTDOCS%%@dirrm %%DOCSDIR%%
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