From owner-svn-ports-head@FreeBSD.ORG Fri Mar 6 12:53:59 2015 Return-Path: Delivered-To: svn-ports-head@freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [8.8.178.115]) (using TLSv1.2 with cipher AECDH-AES256-SHA (256/256 bits)) (No client certificate requested) by hub.freebsd.org (Postfix) with ESMTPS id A4F6536B; Fri, 6 Mar 2015 12:53:59 +0000 (UTC) Received: from svn.freebsd.org (svn.freebsd.org [IPv6:2001:1900:2254:2068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 9047A5F0; Fri, 6 Mar 2015 12:53:59 +0000 (UTC) Received: from svn.freebsd.org ([127.0.1.70]) by svn.freebsd.org (8.14.9/8.14.9) with ESMTP id t26Crx8L028343; Fri, 6 Mar 2015 12:53:59 GMT (envelope-from robak@FreeBSD.org) Received: (from robak@localhost) by svn.freebsd.org (8.14.9/8.14.9/Submit) id t26Crxme028341; Fri, 6 Mar 2015 12:53:59 GMT (envelope-from robak@FreeBSD.org) Message-Id: <201503061253.t26Crxme028341@svn.freebsd.org> X-Authentication-Warning: svn.freebsd.org: robak set sender to robak@FreeBSD.org using -f From: Bartek Rutkowski Date: Fri, 6 Mar 2015 12:53:59 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r380597 - head/biology/samtools X-SVN-Group: ports-head MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.18-1 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 06 Mar 2015 12:53:59 -0000 Author: robak Date: Fri Mar 6 12:53:58 2015 New Revision: 380597 URL: https://svnweb.freebsd.org/changeset/ports/380597 QAT: https://qat.redports.org/buildarchive/r380597/ Log: biology/samtools: update 1.1 -> 1.2 PR: 198292 Submitted by: Reed Cartwright Modified: head/biology/samtools/Makefile head/biology/samtools/distinfo Modified: head/biology/samtools/Makefile ============================================================================== --- head/biology/samtools/Makefile Fri Mar 6 12:45:22 2015 (r380596) +++ head/biology/samtools/Makefile Fri Mar 6 12:53:58 2015 (r380597) @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= samtools -PORTVERSION= 1.1 +PORTVERSION= 1.2 CATEGORIES= biology MAINTAINER= cartwright@asu.edu @@ -11,11 +11,12 @@ COMMENT= Tools for manipulating next-gen LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE +BUILD_DEPENDS= htslib>=1.2:${PORTSDIR}/biology/htslib LIB_DEPENDS= libhts.so:${PORTSDIR}/biology/htslib USE_GITHUB= yes GH_ACCOUNT= samtools -GH_COMMIT= 34c6691 +GH_COMMIT= 6af451d USES= gmake SUB_FILES= pkg-message Modified: head/biology/samtools/distinfo ============================================================================== --- head/biology/samtools/distinfo Fri Mar 6 12:45:22 2015 (r380596) +++ head/biology/samtools/distinfo Fri Mar 6 12:53:58 2015 (r380597) @@ -1,2 +1,2 @@ -SHA256 (samtools-1.1.tar.gz) = adf674bef85e6ffd88d19178a46f229fc033c7302610d5a51ef9709dd0346c59 -SIZE (samtools-1.1.tar.gz) = 4321336 +SHA256 (samtools-1.2.tar.gz) = a9f8695d2d7da23f2cbc6e34820eff9169966ed7dd52254b427e0036b16b1f23 +SIZE (samtools-1.2.tar.gz) = 4318928