From owner-svn-ports-head@freebsd.org Fri Dec 22 12:27:15 2017 Return-Path: Delivered-To: svn-ports-head@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 90664E9567D; Fri, 22 Dec 2017 12:27:15 +0000 (UTC) (envelope-from amdmi3@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 53ACB74C20; Fri, 22 Dec 2017 12:27:15 +0000 (UTC) (envelope-from amdmi3@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id vBMCREcf025260; Fri, 22 Dec 2017 12:27:14 GMT (envelope-from amdmi3@FreeBSD.org) Received: (from amdmi3@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id vBMCRE3H025258; Fri, 22 Dec 2017 12:27:14 GMT (envelope-from amdmi3@FreeBSD.org) Message-Id: <201712221227.vBMCRE3H025258@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: amdmi3 set sender to amdmi3@FreeBSD.org using -f From: Dmitry Marakasov Date: Fri, 22 Dec 2017 12:27:14 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r456976 - in head/biology/bedtools: . files X-SVN-Group: ports-head X-SVN-Commit-Author: amdmi3 X-SVN-Commit-Paths: in head/biology/bedtools: . files X-SVN-Commit-Revision: 456976 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.25 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Fri, 22 Dec 2017 12:27:15 -0000 Author: amdmi3 Date: Fri Dec 22 12:27:14 2017 New Revision: 456976 URL: https://svnweb.freebsd.org/changeset/ports/456976 Log: - Fix build on 11+ Approved by: portmgr blanket Added: head/biology/bedtools/files/patch-src_utils_FileRecordTools_Records_StrandQueue.h (contents, props changed) Modified: head/biology/bedtools/Makefile Modified: head/biology/bedtools/Makefile ============================================================================== --- head/biology/bedtools/Makefile Fri Dec 22 10:49:09 2017 (r456975) +++ head/biology/bedtools/Makefile Fri Dec 22 12:27:14 2017 (r456976) @@ -13,10 +13,6 @@ COMMENT= Toolset for genome arithmetic LICENSE= GPLv2 LICENSE_FILE= ${WRKSRC}/LICENSE -BROKEN_FreeBSD_12_aarch64= fails to compile: /usr/include/c++/v1/queue:401:5: error: static_assert failed -BROKEN_armv6= fails to compile: implicit instantiation of undefined template __static_assert_test -BROKEN_armv7= fails to compile: implicit instantiation of undefined template __static_assert_test - USE_GITHUB= yes GH_ACCOUNT= arq5x GH_PROJECT= bedtools2 Added: head/biology/bedtools/files/patch-src_utils_FileRecordTools_Records_StrandQueue.h ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/bedtools/files/patch-src_utils_FileRecordTools_Records_StrandQueue.h Fri Dec 22 12:27:14 2017 (r456976) @@ -0,0 +1,11 @@ +--- src/utils/FileRecordTools/Records/StrandQueue.h.orig 2015-09-03 04:36:18 UTC ++++ src/utils/FileRecordTools/Records/StrandQueue.h +@@ -30,7 +30,7 @@ public: + + private: + // static RecordPtrSortFunctor _recSortFunctor; +- typedef priority_queue, RecordPtrSortDescFunctor > queueType; ++ typedef priority_queue, RecordPtrSortDescFunctor > queueType; + vector _queues; + static const int NUM_QUEUES = 3; +