Date: Sat, 2 Dec 2017 03:32:17 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r455332 - in head/devel: . RStudio RStudio/files Message-ID: <201712020332.vB23WH1x020347@repo.freebsd.org>
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Author: yuri Date: Sat Dec 2 03:32:16 2017 New Revision: 455332 URL: https://svnweb.freebsd.org/changeset/ports/455332 Log: New port: devel/rstudio: Integrated development environment (IDE) for R PR: 220359 Approved by: tcberner (mentor) Differential Revision: https://reviews.freebsd.org/D13139 Added: head/devel/RStudio/ head/devel/RStudio/Makefile (contents, props changed) head/devel/RStudio/distinfo (contents, props changed) head/devel/RStudio/files/ head/devel/RStudio/files/global-setenv.h (contents, props changed) head/devel/RStudio/files/patch-CMakeGlobals.txt (contents, props changed) head/devel/RStudio/files/patch-CMakeLists.txt (contents, props changed) head/devel/RStudio/files/patch-src_cpp_CMakeLists.txt (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_Backtrace.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_CMakeLists.txt (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_include_core_r__util_RTokenizer.hpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_r__util_RSessionContext.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_system_PosixChildProcess.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_system_PosixSched.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_core_system_PosixSystem.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_desktop_DesktopMain.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_server_CMakeLists.txt (contents, props changed) head/devel/RStudio/files/patch-src_cpp_session_CMakeLists.txt (contents, props changed) head/devel/RStudio/files/patch-src_cpp_session_SessionHttpMethods.cpp (contents, props changed) head/devel/RStudio/files/patch-src_cpp_session_session-config.h.in (contents, props changed) head/devel/RStudio/pkg-descr (contents, props changed) Modified: head/devel/Makefile Modified: head/devel/Makefile ============================================================================== --- head/devel/Makefile Sat Dec 2 02:25:11 2017 (r455331) +++ head/devel/Makefile Sat Dec 2 03:32:16 2017 (r455332) @@ -65,6 +65,7 @@ SUBDIR += R-cran-tidyr SUBDIR += R-cran-tidyselect SUBDIR += R-cran-withr + SUBDIR += RStudio SUBDIR += SpecTcl SUBDIR += aap SUBDIR += aarch64-binutils Added: head/devel/RStudio/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/Makefile Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,79 @@ +# $FreeBSD$ + +# This port opens too many files during build, more than the default setting. Its build is known to succeed with kern.maxfiles="25000" (in /boot/loader.conf). + +PORTNAME= RStudio +DISTVERSIONPREFIX= v +DISTVERSION= 1.1.385 +CATEGORIES= devel math java +MASTER_SITES= https://s3.amazonaws.com/rstudio-dictionaries/:dictionaries \ + https://s3.amazonaws.com/rstudio-buildtools/:buildtools +DISTFILES= core-dictionaries.zip:dictionaries \ + gin-${GIN_VERSION}.zip:buildtools \ + gwt-${GWT_VERSION}.zip:buildtools \ + mathjax-26.zip:buildtools + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Integrated development environment (IDE) for R + +LICENSE= GPLv3 +LICENSE_FILE= ${WRKSRC}/COPYING + +BUILD_DEPENDS= ant:devel/apache-ant \ + ${LOCALBASE}/include/sys/sysinfo.h:devel/libsysinfo \ + pandoc:textproc/hs-pandoc +LIB_DEPENDS= libR.so:math/R \ + libboost_thread.so:devel/boost-libs \ + libinotify.so:devel/libinotify \ + libuuid.so:misc/e2fsprogs-libuuid + +USES= cmake:outsource desktop-file-utils fortran pkgconfig shared-mime-info +USE_QT5= core dbus gui location network opengl printsupport qml quick sensors \ + sql svg webchannel webkit widgets xml xmlpatterns buildtools_build qmake_build +USE_JAVA= yes +JAVA_BUILD= yes +USE_GITHUB= yes +GH_TUPLE= rstudio:rmarkdown:aed26ac:rmarkdown/dependencies/common/rmarkdown \ + rstudio:rsconnect:03c379b:rsconnect/dependencies/common/rsconnect + +CMAKE_ARGS= -DRSTUDIO_TARGET=Desktop \ + -DFREEBSD_RSTUDIO_VERSION:STRING=${PORTVERSION} \ + -DFREEBSD_LIBDIR:STRING=${PREFIX}/lib +MAKE_ENV= HOME=${WRKDIR} \ + ANT_OPTS="-Duser.home=${WRKDIR}" +WRKSRC= ${WRKDIR}/${PORTNAME:tl}-${PORTVERSION} + +GWT_VERSION= 2.7.0 +GIN_VERSION= 1.5 + +post-extract: + @${MKDIR} ${WRKSRC}/dependencies/common/dictionaries && ${MV} ${WRKDIR}/en_* ${WRKSRC}/dependencies/common/dictionaries/ + @${MV} ${WRKDIR}/mathjax-* ${WRKSRC}/dependencies/common/ + @${MKDIR} ${WRKSRC}/src/gwt/lib/gwt && ${MV} ${WRKDIR}/gwt-${GWT_VERSION} ${WRKSRC}/src/gwt/lib/gwt/${GWT_VERSION} + @${MKDIR} ${WRKSRC}/src/gwt/lib/gin/${GIN_VERSION} && ${MV} ${WRKDIR}/*.jar ${WRKDIR}/javadoc ${WRKSRC}/src/gwt/lib/gin/${GIN_VERSION}/ + +post-patch: + @${REINPLACE_CMD} -e ' \ + s|get_filename_component|#get_filename_component|; \ + s|set(CMAKE_PREFIX_PATH "$${QT_BIN_DIR}//..//lib//cmake")|set(CMAKE_PREFIX_PATH "${LOCALBASE}/lib/cmake")|; \ + s|/usr/share/|${PREFIX}/share/|g' \ + ${WRKSRC}/src/cpp/desktop/CMakeLists.txt + @${REINPLACE_CMD} -e ' \ + s|</java>|<jvmarg value="-Duser.home=${WRKDIR}"/></java>|' \ + ${WRKSRC}/src/gwt/build.xml + @${REINPLACE_CMD} -e '\ + s|rHomePaths.push_back|//rHomePaths.push_back|; \ + s|//rHomePaths.push_back(FilePath("/usr/local/lib/|rHomePaths.push_back(FilePath("${PREFIX}/lib/|' \ + ${WRKSRC}/src/cpp/core/r_util/RVersionsPosix.cpp + +pre-build: + @${CP} ${FILESDIR}/global-setenv.h ${WRKSRC}/src/cpp/desktop/ + @${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${WRKSRC}/src/cpp/desktop/global-setenv.h + +post-install: + @${LN} -s ${PREFIX}/lib/rstudio/bin/rstudio ${STAGEDIR}${PREFIX}/bin/rstudio + @${REINPLACE_CMD} -e 's|^Exec=.*/rstudio|Exec=${PREFIX}/bin/rstudio|' ${STAGEDIR}${PREFIX}/share/applications/rstudio.desktop + # There is a variability in .js file names due to the use of random numbers, so we use the automatic plist. + @${SETENV} ${CO_ENV} ${SH} ${SCRIPTSDIR}/check-stagedir.sh makeplist | ${GREP} -v ^\/ | ${SED} -e 's|%%WWWDIR%%|www/rstudio|' > ${TMPPLIST} + +.include <bsd.port.mk> Added: head/devel/RStudio/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/distinfo Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,15 @@ +TIMESTAMP = 1511035341 +SHA256 (core-dictionaries.zip) = 4341a9630efb9dcf7f215c324136407f3b3d6003e1c96f2e5e1f9f14d5787494 +SIZE (core-dictionaries.zip) = 876339 +SHA256 (gin-1.5.zip) = f561f4eb5d5fe1cff95c881e6aed53a86e9f0de8a52863295a8600375f96ab94 +SIZE (gin-1.5.zip) = 1055663 +SHA256 (gwt-2.7.0.zip) = aa65061b73836190410720bea422eb8e787680d7bc0c2b244ae6c9a0d24747b3 +SIZE (gwt-2.7.0.zip) = 108818328 +SHA256 (mathjax-26.zip) = 939a2d7f37e26287970be942df70f3e8f272bac2eb868ce1de18bb95d3c26c71 +SIZE (mathjax-26.zip) = 3061588 +SHA256 (RStudio-RStudio-v1.1.385_GH0.tar.gz) = d4e8dd4106c85ae6352e4399667de7eccde0e6aa018f08711a8c4aad404eff3c +SIZE (RStudio-RStudio-v1.1.385_GH0.tar.gz) = 20197003 +SHA256 (rstudio-rmarkdown-aed26ac_GH0.tar.gz) = b6f6f48dd9930514204739d8957c2737f0b1d110aebf9f89fa31de10598cb29b +SIZE (rstudio-rmarkdown-aed26ac_GH0.tar.gz) = 2087615 +SHA256 (rstudio-rsconnect-03c379b_GH0.tar.gz) = d24b6ee49f32f650f6d10bbfc7b2f61aee258f2fbf45a43c006f9e0a726bcea6 +SIZE (rstudio-rsconnect-03c379b_GH0.tar.gz) = 220711 Added: head/devel/RStudio/files/global-setenv.h ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/global-setenv.h Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,7 @@ + +#define GLOBAL_SETENV \ + setenv("R_USER", ::getenv("HOME"), 0); \ + setenv("R_HOME", "%%PREFIX%%/lib/R", 0); \ + setenv("R_INCLUDE_DIR", "%%PREFIX%%/lib/R/include", 0); \ + setenv("R_LIBS", "%%PREFIX%%/lib/R", 0); \ + setenv("R_DOC_DIR", "%%PREFIX%%/share/doc/R", 0); Added: head/devel/RStudio/files/patch-CMakeGlobals.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-CMakeGlobals.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,19 @@ +--- CMakeGlobals.txt.orig 2017-11-16 21:40:37 UTC ++++ CMakeGlobals.txt +@@ -65,15 +65,7 @@ endif() + + # record git revision hash (cache it since we don't use this in development + # mode and we don't want it to force rebuilds there) +-if(NOT RSTUDIO_SESSION_WIN64 AND NOT RSTUDIO_GIT_REVISION_HASH) +- find_program(GIT_EXECUTABLE git) +- if(GIT_EXECUTABLE) +- exec_program(git ARGS rev-parse HEAD +- OUTPUT_VARIABLE RSTUDIO_GIT_REVISION_HASH) +- SET(RSTUDIO_GIT_REVISION_HASH "${RSTUDIO_GIT_REVISION_HASH}" CACHE STRING "Git Revision Hash") +- endif() +-endif() +- ++SET(RSTUDIO_VERSION "${FREEBSD_RSTUDIO_VERSION}" CACHE STRING "FreeBSD RStudio version") + + # required R version + set(RSTUDIO_R_MAJOR_VERSION_REQUIRED 2) Added: head/devel/RStudio/files/patch-CMakeLists.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-CMakeLists.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,21 @@ +--- CMakeLists.txt.orig 2017-11-16 21:40:37 UTC ++++ CMakeLists.txt +@@ -31,8 +31,7 @@ endif() + if (NOT RSTUDIO_SESSION_WIN64) + # dynamically configure SOURCE with the git revision hash + INSTALL(CODE " +- exec_program(git ARGS rev-parse HEAD +- OUTPUT_VARIABLE RSTUDIO_GIT_REVISION_HASH) ++ set(RSTUDIO_VERSION ${FREEBSD_RSTUDIO_VERSION}) + configure_file (\"${CMAKE_CURRENT_SOURCE_DIR}/SOURCE.in\" + \"${CMAKE_CURRENT_BINARY_DIR}/SOURCE\") + ") +@@ -57,8 +56,6 @@ add_subdirectory(package) + + + +- +- + + + Added: head/devel/RStudio/files/patch-src_cpp_CMakeLists.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_CMakeLists.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,10 @@ +--- src/cpp/CMakeLists.txt.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/CMakeLists.txt +@@ -101,7 +101,6 @@ if(UNIX) + add_definitions(-Wformat -Wformat-security) + add_definitions(-D_FORTIFY_SOURCE=2) + add_definitions(-fstack-protector --param ssp-buffer-size=4) +- add_definitions(-pie -fPIE) + set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -Wl,-z,relro,-z,now") + endif() + Added: head/devel/RStudio/files/patch-src_cpp_core_Backtrace.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_Backtrace.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,11 @@ +--- src/cpp/core/Backtrace.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/Backtrace.cpp +@@ -46,7 +46,7 @@ std::string demangle(const std::string& + + void printBacktrace(std::ostream& os) + { +-#ifndef _WIN32 ++#if !defined(_WIN32) && !defined(__FreeBSD__) + + os << "Backtrace (most recent calls first):" << std::endl << std::endl; + Added: head/devel/RStudio/files/patch-src_cpp_core_CMakeLists.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_CMakeLists.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,23 @@ +--- src/cpp/core/CMakeLists.txt.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/CMakeLists.txt +@@ -143,16 +143,17 @@ if (UNIX) + } + " + HAVE_SCANDIR_POSIX) +- + # platform introspection + check_symbol_exists(SA_NOCLDWAIT "signal.h" HAVE_SA_NOCLDWAIT) + check_symbol_exists(SO_PEERCRED "sys/socket.h" HAVE_SO_PEERCRED) ++ set(CMAKE_REQUIRED_LIBRARIES ${FREEBSD_LIBDIR}/libinotify.so) + check_function_exists(inotify_init1 HAVE_INOTIFY_INIT1) ++ set(CMAKE_REQUIRED_LIBRARIES "") + check_function_exists(getpeereid HAVE_GETPEEREID) + check_function_exists(setresuid HAVE_SETRESUID) +- if(EXISTS "/proc/self") ++ #if(EXISTS "/proc/self") + set(HAVE_PROCSELF TRUE) +- endif() ++ #endif() + configure_file (${CMAKE_CURRENT_SOURCE_DIR}/config.h.in + ${CMAKE_CURRENT_BINARY_DIR}/config.h) + Added: head/devel/RStudio/files/patch-src_cpp_core_include_core_r__util_RTokenizer.hpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_include_core_r__util_RTokenizer.hpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,11 @@ +--- src/cpp/core/include/core/r_util/RTokenizer.hpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/include/core/r_util/RTokenizer.hpp +@@ -35,7 +35,7 @@ + + // On Linux confirm that wchar_t is Unicode + #if !defined(_WIN32) && !defined(__APPLE__) && !defined(__STDC_ISO_10646__) +- #error "wchar_t is not Unicode" ++// #error "wchar_t is not Unicode" + #endif + + namespace rstudio { Added: head/devel/RStudio/files/patch-src_cpp_core_r__util_RSessionContext.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_r__util_RSessionContext.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,13 @@ +--- src/cpp/core/r_util/RSessionContext.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/r_util/RSessionContext.cpp +@@ -138,8 +138,8 @@ bool isSharedPath(const std::string& pro + // not shared if we're in any of the groups that own the directory + // (note that this checks supplementary group IDs only, so the check + // against the primary group ID above is still required) +- if (::group_member(st.st_gid)) +- return false; ++// if (::group_member(st.st_gid)) ++// return false; + #endif + + // if we got this far, we likely have access due to project sharing Added: head/devel/RStudio/files/patch-src_cpp_core_system_PosixChildProcess.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_system_PosixChildProcess.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,23 @@ +--- src/cpp/core/system/PosixChildProcess.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/system/PosixChildProcess.cpp +@@ -19,14 +19,18 @@ + #include <fcntl.h> + #include <signal.h> + #include <unistd.h> ++#include <termios.h> + + #ifdef __APPLE__ + #include <util.h> + #include <sys/ttycom.h> + #include <sys/ioctl.h> + #else +-#include <pty.h> +-#include <asm/ioctls.h> ++//#include <pty.h> ++//#include <asm/ioctls.h> ++#include <sys/tty.h> ++#include <sys/ttycom.h> ++#include <libutil.h> + #endif + + #include <sys/wait.h> Added: head/devel/RStudio/files/patch-src_cpp_core_system_PosixSched.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_system_PosixSched.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,55 @@ +--- src/cpp/core/system/PosixSched.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/system/PosixSched.cpp +@@ -15,7 +15,11 @@ + + #include <core/system/PosixSched.hpp> + ++#define _GNU_SOURCE + #include <sched.h> ++#include <sys/types.h> ++#include <sys/param.h> // w/out this fails on i386 with error: use of undeclared identifier 'NBBY' ++#include <sys/cpuset.h> + + #include <core/Error.hpp> + +@@ -41,9 +45,10 @@ bool isCpuAffinityEmpty(const CpuAffinit + Error getCpuAffinity(CpuAffinity* pCpus) + { + #ifndef __APPLE__ +- cpu_set_t cs; ++/* ++ cpuset_t cs; + CPU_ZERO(&cs); +- if (::sched_getaffinity(0, sizeof(cs), &cs) == -1) ++ if (sched_getaffinity(0, sizeof(cs), &cs) == -1) + return systemError(errno, ERROR_LOCATION); + + pCpus->clear(); +@@ -55,7 +60,7 @@ Error getCpuAffinity(CpuAffinity* pCpus) + else + pCpus->push_back(false); + } +- ++*/ + return Success(); + #else + return systemError(boost::system::errc::not_supported, ERROR_LOCATION); +@@ -66,7 +71,8 @@ Error getCpuAffinity(CpuAffinity* pCpus) + Error setCpuAffinity(const CpuAffinity& cpus) + { + #ifndef __APPLE__ +- cpu_set_t cs; ++/* ++ cpuset_t cs; + CPU_ZERO(&cs); + + for (std::size_t i=0; i<cpus.size(); i++) +@@ -79,7 +85,7 @@ Error setCpuAffinity(const CpuAffinity& + + if (::sched_setaffinity(0, sizeof(cs), &cs) == -1) + return systemError(errno, ERROR_LOCATION); +- ++*/ + return Success(); + #else + return systemError(boost::system::errc::not_supported, ERROR_LOCATION); Added: head/devel/RStudio/files/patch-src_cpp_core_system_PosixSystem.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_core_system_PosixSystem.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,77 @@ +--- src/cpp/core/system/PosixSystem.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/core/system/PosixSystem.cpp +@@ -36,6 +36,7 @@ + #include <ifaddrs.h> + #include <sys/socket.h> + #include <netdb.h> ++#include <netinet/in.h> + + #include <uuid/uuid.h> + +@@ -46,9 +47,9 @@ + #endif + + #ifndef __APPLE__ +-#include <sys/prctl.h> ++//#include <sys/prctl.h> + #include <sys/sysinfo.h> +-#include <linux/kernel.h> ++//#include <linux/kernel.h> + #include <dirent.h> + #endif + +@@ -670,7 +671,7 @@ Error executablePath(const char * argv0, + + #elif defined(HAVE_PROCSELF) + +- executablePath = std::string("/proc/self/exe"); ++ executablePath = std::string("/proc/curproc/file"); + + #else + +@@ -1102,7 +1103,7 @@ Error osResourceLimit(ResourceLimit limi + case CpuLimit: + *pLimit = RLIMIT_CPU; + break; +-#ifndef __APPLE__ ++#if !defined(__APPLE__) && !defined(__FreeBSD__) + case NiceLimit: + *pLimit = RLIMIT_NICE; + break; +@@ -1175,7 +1176,7 @@ Error systemInformation(SysInfo* pSysInf + { + pSysInfo->cores = boost::thread::hardware_concurrency(); + +-#ifndef __APPLE__ ++#if !defined(__APPLE__) && !defined(__FreeBSD__) + struct sysinfo info; + if (::sysinfo(&info) == -1) + return systemError(errno, ERROR_LOCATION); +@@ -1495,9 +1496,9 @@ Error restrictCoreDumps() + + // no ptrace core dumps permitted + #ifndef __APPLE__ +- int res = ::prctl(PR_SET_DUMPABLE, 0); +- if (res == -1) +- return systemError(errno, ERROR_LOCATION); ++// int res = ::prctl(PR_SET_DUMPABLE, 0); ++// if (res == -1) ++// return systemError(errno, ERROR_LOCATION); + #endif + + return Success(); +@@ -1521,10 +1522,10 @@ void printCoreDumpable(const std::string + + // ptrace + #ifndef __APPLE__ +- int dumpable = ::prctl(PR_GET_DUMPABLE, NULL, NULL, NULL, NULL); +- if (dumpable == -1) +- LOG_ERROR(systemError(errno, ERROR_LOCATION)); +- ostr << " pr_get_dumpable: " << dumpable << std::endl; ++// int dumpable = ::prctl(PR_GET_DUMPABLE, NULL, NULL, NULL, NULL); ++// if (dumpable == -1) ++// LOG_ERROR(systemError(errno, ERROR_LOCATION)); ++// ostr << " pr_get_dumpable: " << dumpable << std::endl; + #endif + + std::cerr << ostr.str(); Added: head/devel/RStudio/files/patch-src_cpp_desktop_DesktopMain.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_desktop_DesktopMain.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,18 @@ +--- src/cpp/desktop/DesktopMain.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/desktop/DesktopMain.cpp +@@ -42,6 +42,7 @@ + #include "DesktopSessionLauncher.hpp" + #include "DesktopProgressActivator.hpp" + #include "DesktopNetworkProxyFactory.hpp" ++#include "global-setenv.h" + + QProcess* pRSessionProcess; + QString sharedSecret; +@@ -198,6 +199,7 @@ bool isNonProjectFilename(QString filena + + int main(int argc, char* argv[]) + { ++ GLOBAL_SETENV + core::system::initHook(); + + try Added: head/devel/RStudio/files/patch-src_cpp_server_CMakeLists.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_server_CMakeLists.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,12 @@ +--- src/cpp/server/CMakeLists.txt.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/server/CMakeLists.txt +@@ -124,6 +124,9 @@ include_directories( + # define executable + add_executable(rserver ${SERVER_SOURCE_FILES} ${SERVER_HEADER_FILES}) + ++# additional libraries ++target_link_libraries(rserver -L${FREEBSD_LIBDIR} -linotify) ++ + # add origin rpath for suse/sles + if(RSTUDIO_PACKAGE_VARIANT STREQUAL "SLES") + set(CMAKE_BUILD_WITH_INSTALL_RPATH TRUE) Added: head/devel/RStudio/files/patch-src_cpp_session_CMakeLists.txt ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_session_CMakeLists.txt Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,95 @@ +--- src/cpp/session/CMakeLists.txt.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/session/CMakeLists.txt +@@ -25,9 +25,9 @@ endif() + if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/mathjax-26") + message(FATAL_ERROR "Mathjax 2.6 not found (re-run install-dependencies script to install)") + endif() +-if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/pandoc") +- message(FATAL_ERROR "pandoc not found (re-run install-dependencies script to install)") +-endif() ++#if(NOT EXISTS "${RSTUDIO_DEPENDENCIES_DIR}/common/pandoc") ++# message(FATAL_ERROR "pandoc not found (re-run install-dependencies script to install)") ++#endif() + + # we often install embedded versions of these packages but don't do so currently + +@@ -39,19 +39,19 @@ endif() + # endif() + + # verify libclang is installed +-if(WIN32) +- set(LIBCLANG_VERSION "3.4") +-else() +- set(LIBCLANG_VERSION "3.5") +-endif() +-set(LIBCLANG_DIR "${RSTUDIO_DEPENDENCIES_DIR}/common/libclang/${LIBCLANG_VERSION}") +-if(NOT EXISTS "${LIBCLANG_DIR}") +- message(FATAL_ERROR "libclang ${LIBCLANG_VERSION} not found (re-run install-dependencies script to install)") +-endif() +-set(LIBCLANG_HEADERS_DIR "${RSTUDIO_DEPENDENCIES_DIR}/common/libclang/builtin-headers") +-if(NOT EXISTS "${LIBCLANG_HEADERS_DIR}") +- message(FATAL_ERROR "libclang builtin-headers not found (re-run install-dependencies script to install)") +-endif() ++#if(WIN32) ++# set(LIBCLANG_VERSION "3.4") ++#else() ++# set(LIBCLANG_VERSION "3.5") ++#endif() ++set(LIBCLANG_DIR ${CMAKE_INSTALL_PREFIX}) ++#if(NOT EXISTS "${LIBCLANG_DIR}") ++# message(FATAL_ERROR "libclang ${LIBCLANG_VERSION} not found (re-run install-dependencies script to install)") ++#endif() ++set(LIBCLANG_HEADERS_DIR "${CMAKE_INSTALL_PREFIX}/include") ++#if(NOT EXISTS "${LIBCLANG_HEADERS_DIR}") ++# message(FATAL_ERROR "libclang builtin-headers not found (re-run install-dependencies script to install)") ++#endif() + + + # include files +@@ -360,6 +360,9 @@ endif() + # define executable + add_executable(rsession ${SESSION_SOURCE_FILES} ${SESSION_HEADER_FILES}) + ++# additional libraries ++target_link_libraries(rsession -L${FREEBSD_LIBDIR} -linotify) ++ + # skip libR RPATH at development time + if(RSTUDIO_DEVELOPMENT OR RSTUDIO_RUN_IN_PLACE) + set_target_properties(rsession PROPERTIES SKIP_BUILD_RPATH TRUE) +@@ -466,11 +469,11 @@ if (NOT RSTUDIO_SESSION_WIN64) + DESTINATION ${RSTUDIO_INSTALL_SUPPORTING}/resources) + + # install pandoc +- set(PANDOC_BIN "${RSTUDIO_DEPENDENCIES_DIR}/common/pandoc/1.19.2.1") +- file(GLOB PANDOC_FILES "${PANDOC_BIN}/pandoc*") +- install(FILES ${PANDOC_FILES} +- PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE +- DESTINATION ${RSTUDIO_INSTALL_BIN}/pandoc) ++ #set(PANDOC_BIN "${}/common/pandoc/1.19.2.1") ++ #file(GLOB PANDOC_FILES "${PANDOC_BIN}/pandoc*") ++ #install(FILES ${PANDOC_FILES} ++ # PERMISSIONS OWNER_READ OWNER_WRITE OWNER_EXECUTE GROUP_READ GROUP_EXECUTE WORLD_READ WORLD_EXECUTE ++ # DESTINATION ${RSTUDIO_INSTALL_BIN}/pandoc) + + # install rmarkdown package + # file(GLOB RMARKDOWN_PACKAGE "${RSTUDIO_DEPENDENCIES_DIR}/common/rmarkdown*.tar.gz") +@@ -511,14 +514,14 @@ if (NOT RSTUDIO_SESSION_WIN64) + install(PROGRAMS ${LIBCLANG_64_FILES} + DESTINATION ${RSTUDIO_INSTALL_BIN}/rsclang/x86_64) + else() +- file(GLOB_RECURSE LIBCLANG_FILES "${LIBCLANG_DIR}/libclang.*") +- install(PROGRAMS ${LIBCLANG_FILES} +- DESTINATION ${RSTUDIO_INSTALL_BIN}/rsclang) ++ #file(GLOB_RECURSE LIBCLANG_FILES "${LIBCLANG_DIR}/libclang.*") ++ #install(PROGRAMS ${LIBCLANG_FILES} ++ # DESTINATION ${RSTUDIO_INSTALL_BIN}/rsclang) + endif() + + # install libclang builtin-headers +- install(DIRECTORY "${RSTUDIO_DEPENDENCIES_DIR}/common/libclang/builtin-headers" +- DESTINATION "${RSTUDIO_INSTALL_SUPPORTING}/resources/libclang") ++ #install(DIRECTORY "${RSTUDIO_DEPENDENCIES_DIR}/common/libclang/builtin-headers" ++ # DESTINATION "${RSTUDIO_INSTALL_SUPPORTING}/resources/libclang") + + # install winpty on windows + if(WIN32) Added: head/devel/RStudio/files/patch-src_cpp_session_SessionHttpMethods.cpp ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_session_SessionHttpMethods.cpp Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,11 @@ +--- src/cpp/session/SessionHttpMethods.cpp.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/session/SessionHttpMethods.cpp +@@ -326,7 +326,7 @@ std::string clientVersion() + return std::string(); + + // clientVersion is the git revision hash +- return RSTUDIO_GIT_REVISION_HASH; ++ return RSTUDIO_VERSION; + } + + void waitForMethodInitFunction(const ClientEvent& initEvent) Added: head/devel/RStudio/files/patch-src_cpp_session_session-config.h.in ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/files/patch-src_cpp_session_session-config.h.in Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,12 @@ +--- src/cpp/session/session-config.h.in.orig 2017-11-16 21:40:37 UTC ++++ src/cpp/session/session-config.h.in +@@ -13,8 +13,7 @@ + * + */ + +-#define RSTUDIO_VERSION "${CPACK_PACKAGE_VERSION}" +-#define RSTUDIO_GIT_REVISION_HASH "${RSTUDIO_GIT_REVISION_HASH}" ++#define RSTUDIO_VERSION "${RSTUDIO_VERSION}" + #cmakedefine RSTUDIO_SERVER + #cmakedefine RSTUDIO_UNVERSIONED_BUILD + #cmakedefine TRACE_PACKRAT_OUTPUT Added: head/devel/RStudio/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/devel/RStudio/pkg-descr Sat Dec 2 03:32:16 2017 (r455332) @@ -0,0 +1,6 @@ +RStudio is an integrated development environment (IDE) for R. +It includes a console, syntax-highlighting editor that supports direct +code execution, as well as tools for plotting, history, debugging and +workspace management. + +WWW: https://www.rstudio.org
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