Date: Sat, 23 Nov 2019 14:45:53 +0000 (UTC) From: "Jason W. Bacon" <jwb@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r518242 - head/biology/py-cutadapt Message-ID: <201911231445.xANEjrUU075787@repo.freebsd.org>
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Author: jwb Date: Sat Nov 23 14:45:53 2019 New Revision: 518242 URL: https://svnweb.freebsd.org/changeset/ports/518242 Log: biology/py-cutadapt: Upgrade to 2.7 Numerous minor fixes and enhancements. Upstreamed setup.py patches for dependency versions. Reported by: portscout Modified: head/biology/py-cutadapt/Makefile head/biology/py-cutadapt/distinfo Modified: head/biology/py-cutadapt/Makefile ============================================================================== --- head/biology/py-cutadapt/Makefile Sat Nov 23 14:41:38 2019 (r518241) +++ head/biology/py-cutadapt/Makefile Sat Nov 23 14:45:53 2019 (r518242) @@ -1,7 +1,7 @@ # $FreeBSD$ PORTNAME= cutadapt -DISTVERSION= 2.5 +DISTVERSION= 2.7 CATEGORIES= biology python MASTER_SITES= CHEESESHOP PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -13,13 +13,12 @@ LICENSE= MIT LICENSE_FILE= ${WRKSRC}/LICENSE BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>0:devel/py-setuptools_scm@${PY_FLAVOR} -RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=0.5.0:archivers/py-xopen@${PY_FLAVOR} \ - ${PYTHON_PKGNAMEPREFIX}dnaio>=0.3:biology/py-dnaio@${PY_FLAVOR} \ - pigz>=0:archivers/pigz +RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}xopen>=0.8.4:archivers/py-xopen@${PY_FLAVOR} \ + ${PYTHON_PKGNAMEPREFIX}dnaio>=0.4.1:biology/py-dnaio@${PY_FLAVOR} TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pytest>0:devel/py-pytest@${PY_FLAVOR} \ ${PYTHON_PKGNAMEPREFIX}pytest-timeout>0:devel/py-pytest-timeout@${PY_FLAVOR} -USES= python:3.4+ +USES= python:3.5+ USE_PYTHON= autoplist concurrent cython distutils post-install: Modified: head/biology/py-cutadapt/distinfo ============================================================================== --- head/biology/py-cutadapt/distinfo Sat Nov 23 14:41:38 2019 (r518241) +++ head/biology/py-cutadapt/distinfo Sat Nov 23 14:45:53 2019 (r518242) @@ -1,3 +1,3 @@ -TIMESTAMP = 1568342520 -SHA256 (cutadapt-2.5.tar.gz) = ced79e49b93e922e579d0bb9d21298dcb2d7b7b1ea721feed484277e08b1660b -SIZE (cutadapt-2.5.tar.gz) = 269321 +TIMESTAMP = 1574517013 +SHA256 (cutadapt-2.7.tar.gz) = 070dec8d94b8bda72906c614b9e71bd61254a67a176dd17e5b57671edd567983 +SIZE (cutadapt-2.7.tar.gz) = 272702
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