Date: Sun, 15 Aug 2004 21:11:47 -0500 (CDT) From: Stephen Montgomery-Smith <stephen@math.missouri.edu> To: FreeBSD-gnats-submit@FreeBSD.org Subject: ports/70509: New Port science/vmd Message-ID: <200408160211.i7G2Blf5037275@cauchy.math.missouri.edu> Resent-Message-ID: <200408160220.i7G2KPk5083918@freefall.freebsd.org>
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>Number: 70509
>Category: ports
>Synopsis: New Port science/vmd
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: change-request
>Submitter-Id: current-users
>Arrival-Date: Mon Aug 16 02:20:25 GMT 2004
>Closed-Date:
>Last-Modified:
>Originator: Stephen Montgomery-Smith
>Release: FreeBSD 4.10-STABLE i386
>Organization:
>Environment:
System: FreeBSD cauchy 4.10-STABLE FreeBSD 4.10-STABLE #0: Thu Jul 8 00:59:01 CDT 2004 stephen@cauchy:/usr/src-copy/sys/compile/gx270 i386
>Description:
>How-To-Repeat:
>Fix:
This has been tested on FreeBSD 4.10-Stable, but I was not able to try
it out on FreeBSD-5.x.
The Porters handbook said that if the Makefile has RESTRICTED set then
it was not necessary to set NO_CDROM or NO_PACKAGE. However, without
NO_PACKAGE, make package still worked for me.
The "RESTRICTED" setting may be too restrictive for the license, but I
am not a lawyer and so I thought I should be better safe than sorry.
# This is a shell archive. Save it in a file, remove anything before
# this line, and then unpack it by entering "sh file". Note, it may
# create directories; files and directories will be owned by you and
# have default permissions.
#
# This archive contains:
#
# vmd
# vmd/Makefile
# vmd/files
# vmd/files/patch-Makefile
# vmd/files/patch-configure
# vmd/files/patch-AtomParser.C
# vmd/pkg-plist
# vmd/pkg-descr
# vmd/distinfo
#
echo c - vmd
mkdir -p vmd > /dev/null 2>&1
echo x - vmd/Makefile
sed 's/^X//' >vmd/Makefile << 'END-of-vmd/Makefile'
X# New ports collection makefile for: vmd
X# Date created: 12 August 2004
X# Whom: Stephen Montgomery-Smith <stephen@math.missouri.edu>
X#
X# $FreeBSD: $
X#
X
XPORTNAME= vmd
XPORTVERSION= 1.8.2
XCATEGORIES= science graphics python tcl84 tk84
XMASTER_SITES= #
XDISTFILES= ${PORTNAME}-${PORTVERSION}.src.tar.gz
X
XMAINTAINER= stephen@math.missouri.edu
XCOMMENT= A molecular visualization program
X
XBUILD_DEPENDS= ${PYNUMERIC}
XLIB_DEPENDS= tcl84:${PORTSDIR}/lang/tcl84 \
X tk84:${PORTSDIR}/x11-toolkits/tk84 \
X fltk:${PORTSDIR}/x11-toolkits/fltk
XRUN_DEPENDS= ${PYNUMERIC}
X
XUSE_PERL5_BUILD= yes
XUSE_GMAKE= yes
XUSE_GL= yes
XUSE_PYTHON= yes
XUSE_REINPLACE= yes
X
X# I.A.N.A.L. so this may be overly restrictive.
XNO_PACKAGE= "License has restrictions"
XNO_CDROM= "License has restrictions"
XRESTRICTED= "License has restrictions"
X
X.include <bsd.port.pre.mk>
X
X# Check for VMD sources
X.if !exists(${DISTDIR}/${DISTFILES}) # && !defined(PACKAGE_BUILDING)
XECHO_MSG=/usr/bin/printf
XIGNORE= :\n\
XBecause of licensing restrictions, you must fetch the source distribution\n\
Xmanually. Please access\n\
Xhttp://www.ks.uiuc.edu/Development/Download/download.cgi?UserID=&AccessCode=&ArchiveID=743\n\
Xwith a web browser. You will be required to log in and register,\n\
Xbut you can create an account on this page. After registration and\n\
Xaccepting the University of Illinois agreement, download the source file,\n\
X${DISTFILES}. Please place this file in ${DISTDIR}.\n
X.endif
X
Xpost-patch:
X ${REINPLACE_CMD} "s/-lpthread/${PTHREAD_LIBS}/" ${WRKSRC}/configure
X ${REINPLACE_CMD} "s/-ltk8.4/-ltk84/" ${WRKSRC}/configure
X ${REINPLACE_CMD} "s/-ltcl8.4/-ltcl84/" ${WRKSRC}/configure
X ${REINPLACE_CMD} "s%\$$python_dir/lib_\$$config_arch%${PREFIX}%" ${WRKSRC}/configure
X ${REINPLACE_CMD} "s/python2.2/${PYTHON_VERSION}/" ${WRKSRC}/configure
X
Xdo-build:
X cd ${WRKDIR}/plugins && ${SETENV} ${MAKE_ENV} PLUGINDIR=${WRKSRC}/plugins ${GMAKE} FREEBSD distrib
X cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} TCL_INCLUDE_DIR=${PREFIX}/include/tcl8.4 TK_INCLUDE_DIR=${PREFIX}/include/tk8.4 ${GMAKE} freebsd.opengl
X cd ${WRKSRC}/src && ${SETENV} ${MAKE_ENV} ${GMAKE} all
X
Xdo-install:
X cd ${WRKSRC}/src && ${SETENV} ${MAKE_ENV} ${GMAKE} install
X
X.include <bsd.port.post.mk>
END-of-vmd/Makefile
echo c - vmd/files
mkdir -p vmd/files > /dev/null 2>&1
echo x - vmd/files/patch-Makefile
sed 's/^X//' >vmd/files/patch-Makefile << 'END-of-vmd/files/patch-Makefile'
X--- Makefile-ooo Fri Dec 5 13:20:58 2003
X+++ Makefile Thu Aug 12 00:12:06 2004
X@@ -52,11 +52,11 @@
X
X ## FreeBSD builds
X freebsd.mesa:
X- ./configure FREEBSD MESA FLTK TK TCL IMD VRPN PYTHON PTHREADS LIBTACHYON NUMPY SILENT
X+ ./configure FREEBSD MESA FLTK TK TCL IMD PYTHON PTHREADS NUMPY SILENT
X
X # FreeBSD doesn't have hardware good accelleration support
X freebsd.opengl:
X- ./configure FREEBSD OPENGL FLTK TK IMD VRPN SILENT SPACEBALL TCL PTHREADS ACTC LIBTACHYON PYTHON NUMPY
X+ ./configure FREEBSD OPENGL FLTK TK IMD SILENT TCL PTHREADS PYTHON NUMPY
X
X
X
END-of-vmd/files/patch-Makefile
echo x - vmd/files/patch-configure
sed 's/^X//' >vmd/files/patch-configure << 'END-of-vmd/files/patch-configure'
X--- configure-xxx Fri Dec 5 13:20:58 2003
X+++ configure Thu Aug 12 00:22:30 2004
X@@ -1175,7 +1175,7 @@
X # XFree 4.0 Direct Rendering Interface and GLX
X $opengl_dir = "/usr/X11R6";
X $opengl_include = "-I$opengl_dir/include";
X- $opengl_library = "-L$opengl_dir/lib";
X+ $opengl_library = "-L$opengl_dir/lib -L/usr/local/lib";
X $opengl_libs = "-lGL -lGLU";
X
X $arch_lex = "flex";
X@@ -1209,7 +1209,7 @@
X
X # this is to make tcl happy,
X # also needed for plugins
X- $system_libs .= " -ldl";
X+ # $system_libs .= " -ldl";
X
X if ($config_python) {
X # this is to make python happy
END-of-vmd/files/patch-configure
echo x - vmd/files/patch-AtomParser.C
sed 's/^X//' >vmd/files/patch-AtomParser.C << 'END-of-vmd/files/patch-AtomParser.C'
X--- src/AtomParser.C-xxx Fri Dec 5 13:21:53 2003
X+++ src/AtomParser.C Thu Aug 12 00:24:00 2004
X@@ -109,7 +109,7 @@
X #define YYCONST
X #endif
X
X-#if !defined(_MSC_VER) && !defined(ARCH_MACOSX)
X+#if !defined(_MSC_VER) && !defined(ARCH_MACOSX) && !defined(ARCH_FREEBSD)
X #include <values.h>
X #endif
X
END-of-vmd/files/patch-AtomParser.C
echo x - vmd/pkg-plist
sed 's/^X//' >vmd/pkg-plist << 'END-of-vmd/pkg-plist'
Xlib/vmd/doc/ug.pdf
Xlib/vmd/Announcement
Xlib/vmd/README
Xlib/vmd/LICENSE
Xlib/vmd/vmd_FREEBSD
Xlib/vmd/scripts/CVS/Root
Xlib/vmd/scripts/CVS/Repository
Xlib/vmd/scripts/CVS/Entries
Xlib/vmd/scripts/vmd/CVS/Root
Xlib/vmd/scripts/vmd/CVS/Repository
Xlib/vmd/scripts/vmd/CVS/Entries
Xlib/vmd/scripts/vmd/README.chemical2vmd
Xlib/vmd/scripts/vmd/save_state.tcl
Xlib/vmd/scripts/vmd/atomselect.tcl
Xlib/vmd/scripts/vmd/tclIndex
Xlib/vmd/scripts/vmd/chemical2vmd
Xlib/vmd/scripts/vmd/draw.tcl
Xlib/vmd/scripts/vmd/vmdinit.tcl
Xlib/vmd/scripts/vmd/vectors.tcl
Xlib/vmd/scripts/vmd/graphlabels.tcl
Xlib/vmd/scripts/vmd/hotkeys.tcl
Xlib/vmd/scripts/vmd/openURL.tcl
Xlib/vmd/scripts/vmd/atomselmacros.tcl
Xlib/vmd/scripts/vmd/biocore.tcl
Xlib/vmd/scripts/vmd/logfile.tcl
Xlib/vmd/scripts/vmd/www.tcl
Xlib/vmd/scripts/README
Xlib/vmd/scripts/tcl8.4/http2.4/http.tcl
Xlib/vmd/scripts/tcl8.4/http2.4/pkgIndex.tcl
Xlib/vmd/scripts/tcl8.4/http1.0/http.tcl
Xlib/vmd/scripts/tcl8.4/http1.0/pkgIndex.tcl
Xlib/vmd/scripts/tcl8.4/opt0.4/optparse.tcl
Xlib/vmd/scripts/tcl8.4/opt0.4/pkgIndex.tcl
Xlib/vmd/scripts/tcl8.4/encoding/ascii.enc
Xlib/vmd/scripts/tcl8.4/encoding/big5.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1250.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1251.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1252.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1253.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1254.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1255.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1256.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1257.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp1258.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp437.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp737.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp775.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp850.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp852.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp855.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp857.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp860.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp861.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp862.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp863.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp864.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp865.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp866.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp869.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp874.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp932.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp936.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp949.enc
Xlib/vmd/scripts/tcl8.4/encoding/cp950.enc
Xlib/vmd/scripts/tcl8.4/encoding/dingbats.enc
Xlib/vmd/scripts/tcl8.4/encoding/ebcdic.enc
Xlib/vmd/scripts/tcl8.4/encoding/euc-cn.enc
Xlib/vmd/scripts/tcl8.4/encoding/euc-jp.enc
Xlib/vmd/scripts/tcl8.4/encoding/euc-kr.enc
Xlib/vmd/scripts/tcl8.4/encoding/gb12345.enc
Xlib/vmd/scripts/tcl8.4/encoding/gb1988.enc
Xlib/vmd/scripts/tcl8.4/encoding/gb2312.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso2022-jp.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso2022-kr.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso2022.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-1.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-10.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-13.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-14.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-15.enc
Xlib/vmd/scripts/tcl8.4/encoding/jis0201.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-16.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-2.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-3.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-4.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-5.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-6.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-7.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-8.enc
Xlib/vmd/scripts/tcl8.4/encoding/iso8859-9.enc
Xlib/vmd/scripts/tcl8.4/encoding/jis0208.enc
Xlib/vmd/scripts/tcl8.4/encoding/jis0212.enc
Xlib/vmd/scripts/tcl8.4/encoding/koi8-r.enc
Xlib/vmd/scripts/tcl8.4/encoding/koi8-u.enc
Xlib/vmd/scripts/tcl8.4/encoding/ksc5601.enc
Xlib/vmd/scripts/tcl8.4/encoding/macCentEuro.enc
Xlib/vmd/scripts/tcl8.4/encoding/macCroatian.enc
Xlib/vmd/scripts/tcl8.4/encoding/macCyrillic.enc
Xlib/vmd/scripts/tcl8.4/encoding/macDingbats.enc
Xlib/vmd/scripts/tcl8.4/encoding/macGreek.enc
Xlib/vmd/scripts/tcl8.4/encoding/macIceland.enc
Xlib/vmd/scripts/tcl8.4/encoding/macJapan.enc
Xlib/vmd/scripts/tcl8.4/encoding/macRoman.enc
Xlib/vmd/scripts/tcl8.4/encoding/macRomania.enc
Xlib/vmd/scripts/tcl8.4/encoding/macThai.enc
Xlib/vmd/scripts/tcl8.4/encoding/macTurkish.enc
Xlib/vmd/scripts/tcl8.4/encoding/macUkraine.enc
Xlib/vmd/scripts/tcl8.4/encoding/shiftjis.enc
Xlib/vmd/scripts/tcl8.4/encoding/symbol.enc
Xlib/vmd/scripts/tcl8.4/encoding/tis-620.enc
Xlib/vmd/scripts/tcl8.4/msgcat1.3/msgcat.tcl
Xlib/vmd/scripts/tcl8.4/msgcat1.3/pkgIndex.tcl
Xlib/vmd/scripts/tcl8.4/tcltest2.2/pkgIndex.tcl
Xlib/vmd/scripts/tcl8.4/tcltest2.2/tcltest.tcl
Xlib/vmd/scripts/tcl8.4/auto.tcl
Xlib/vmd/scripts/tcl8.4/history.tcl
Xlib/vmd/scripts/tcl8.4/init.tcl
Xlib/vmd/scripts/tcl8.4/ldAout.tcl
Xlib/vmd/scripts/tcl8.4/package.tcl
Xlib/vmd/scripts/tcl8.4/parray.tcl
Xlib/vmd/scripts/tcl8.4/safe.tcl
Xlib/vmd/scripts/tcl8.4/word.tcl
Xlib/vmd/scripts/tcl8.4/tclIndex
Xlib/vmd/scripts/tcl8.4/tclAppInit.c
Xlib/vmd/scripts/tcl8.4/ldAix
Xlib/vmd/scripts/tk8.4/images/README
Xlib/vmd/scripts/tk8.4/images/logo.eps
Xlib/vmd/scripts/tk8.4/images/logo100.gif
Xlib/vmd/scripts/tk8.4/images/logo64.gif
Xlib/vmd/scripts/tk8.4/images/logoLarge.gif
Xlib/vmd/scripts/tk8.4/images/logoMed.gif
Xlib/vmd/scripts/tk8.4/images/pwrdLogo.eps
Xlib/vmd/scripts/tk8.4/images/pwrdLogo100.gif
Xlib/vmd/scripts/tk8.4/images/pwrdLogo150.gif
Xlib/vmd/scripts/tk8.4/images/pwrdLogo175.gif
Xlib/vmd/scripts/tk8.4/images/pwrdLogo200.gif
Xlib/vmd/scripts/tk8.4/images/pwrdLogo75.gif
Xlib/vmd/scripts/tk8.4/images/tai-ku.gif
Xlib/vmd/scripts/tk8.4/msgs/cs.msg
Xlib/vmd/scripts/tk8.4/msgs/de.msg
Xlib/vmd/scripts/tk8.4/msgs/el.msg
Xlib/vmd/scripts/tk8.4/msgs/en.msg
Xlib/vmd/scripts/tk8.4/msgs/en_gb.msg
Xlib/vmd/scripts/tk8.4/msgs/es.msg
Xlib/vmd/scripts/tk8.4/msgs/fr.msg
Xlib/vmd/scripts/tk8.4/msgs/it.msg
Xlib/vmd/scripts/tk8.4/msgs/nl.msg
Xlib/vmd/scripts/tk8.4/msgs/ru.msg
Xlib/vmd/scripts/tk8.4/bgerror.tcl
Xlib/vmd/scripts/tk8.4/button.tcl
Xlib/vmd/scripts/tk8.4/choosedir.tcl
Xlib/vmd/scripts/tk8.4/clrpick.tcl
Xlib/vmd/scripts/tk8.4/comdlg.tcl
Xlib/vmd/scripts/tk8.4/console.tcl
Xlib/vmd/scripts/tk8.4/dialog.tcl
Xlib/vmd/scripts/tk8.4/entry.tcl
Xlib/vmd/scripts/tk8.4/focus.tcl
Xlib/vmd/scripts/tk8.4/listbox.tcl
Xlib/vmd/scripts/tk8.4/menu.tcl
Xlib/vmd/scripts/tk8.4/mkpsenc.tcl
Xlib/vmd/scripts/tk8.4/msgbox.tcl
Xlib/vmd/scripts/tk8.4/obsolete.tcl
Xlib/vmd/scripts/tk8.4/optMenu.tcl
Xlib/vmd/scripts/tk8.4/palette.tcl
Xlib/vmd/scripts/tk8.4/panedwindow.tcl
Xlib/vmd/scripts/tk8.4/safetk.tcl
Xlib/vmd/scripts/tk8.4/scale.tcl
Xlib/vmd/scripts/tk8.4/scrlbar.tcl
Xlib/vmd/scripts/tk8.4/spinbox.tcl
Xlib/vmd/scripts/tk8.4/tearoff.tcl
Xlib/vmd/scripts/tk8.4/text.tcl
Xlib/vmd/scripts/tk8.4/tk.tcl
Xlib/vmd/scripts/tk8.4/tkfbox.tcl
Xlib/vmd/scripts/tk8.4/unsupported.tcl
Xlib/vmd/scripts/tk8.4/xmfbox.tcl
Xlib/vmd/scripts/tk8.4/prolog.ps
Xlib/vmd/scripts/tk8.4/tclIndex
Xlib/vmd/scripts/tk8.4/tkAppInit.c
Xlib/vmd/scripts/tk8.4/demos/images/earth.gif
Xlib/vmd/scripts/tk8.4/demos/images/earthris.gif
Xlib/vmd/scripts/tk8.4/demos/images/face.bmp
Xlib/vmd/scripts/tk8.4/demos/images/flagdown.bmp
Xlib/vmd/scripts/tk8.4/demos/images/flagup.bmp
Xlib/vmd/scripts/tk8.4/demos/images/gray25.bmp
Xlib/vmd/scripts/tk8.4/demos/images/letters.bmp
Xlib/vmd/scripts/tk8.4/demos/images/noletter.bmp
Xlib/vmd/scripts/tk8.4/demos/images/pattern.bmp
Xlib/vmd/scripts/tk8.4/demos/images/tcllogo.gif
Xlib/vmd/scripts/tk8.4/demos/images/teapot.ppm
Xlib/vmd/scripts/tk8.4/demos/README
Xlib/vmd/scripts/tk8.4/demos/arrow.tcl
Xlib/vmd/scripts/tk8.4/demos/bind.tcl
Xlib/vmd/scripts/tk8.4/demos/bitmap.tcl
Xlib/vmd/scripts/tk8.4/demos/browse
Xlib/vmd/scripts/tk8.4/demos/button.tcl
Xlib/vmd/scripts/tk8.4/demos/check.tcl
Xlib/vmd/scripts/tk8.4/demos/clrpick.tcl
Xlib/vmd/scripts/tk8.4/demos/colors.tcl
Xlib/vmd/scripts/tk8.4/demos/cscroll.tcl
Xlib/vmd/scripts/tk8.4/demos/ctext.tcl
Xlib/vmd/scripts/tk8.4/demos/dialog1.tcl
Xlib/vmd/scripts/tk8.4/demos/dialog2.tcl
Xlib/vmd/scripts/tk8.4/demos/entry1.tcl
Xlib/vmd/scripts/tk8.4/demos/entry2.tcl
Xlib/vmd/scripts/tk8.4/demos/entry3.tcl
Xlib/vmd/scripts/tk8.4/demos/filebox.tcl
Xlib/vmd/scripts/tk8.4/demos/floor.tcl
Xlib/vmd/scripts/tk8.4/demos/form.tcl
Xlib/vmd/scripts/tk8.4/demos/hello
Xlib/vmd/scripts/tk8.4/demos/hscale.tcl
Xlib/vmd/scripts/tk8.4/demos/icon.tcl
Xlib/vmd/scripts/tk8.4/demos/image1.tcl
Xlib/vmd/scripts/tk8.4/demos/image2.tcl
Xlib/vmd/scripts/tk8.4/demos/items.tcl
Xlib/vmd/scripts/tk8.4/demos/ixset
Xlib/vmd/scripts/tk8.4/demos/label.tcl
Xlib/vmd/scripts/tk8.4/demos/labelframe.tcl
Xlib/vmd/scripts/tk8.4/demos/license.terms
Xlib/vmd/scripts/tk8.4/demos/menu.tcl
Xlib/vmd/scripts/tk8.4/demos/menubu.tcl
Xlib/vmd/scripts/tk8.4/demos/msgbox.tcl
Xlib/vmd/scripts/tk8.4/demos/paned1.tcl
Xlib/vmd/scripts/tk8.4/demos/paned2.tcl
Xlib/vmd/scripts/tk8.4/demos/plot.tcl
Xlib/vmd/scripts/tk8.4/demos/puzzle.tcl
Xlib/vmd/scripts/tk8.4/demos/radio.tcl
Xlib/vmd/scripts/tk8.4/demos/rmt
Xlib/vmd/scripts/tk8.4/demos/rolodex
Xlib/vmd/scripts/tk8.4/demos/ruler.tcl
Xlib/vmd/scripts/tk8.4/demos/sayings.tcl
Xlib/vmd/scripts/tk8.4/demos/search.tcl
Xlib/vmd/scripts/tk8.4/demos/spin.tcl
Xlib/vmd/scripts/tk8.4/demos/square
Xlib/vmd/scripts/tk8.4/demos/states.tcl
Xlib/vmd/scripts/tk8.4/demos/style.tcl
Xlib/vmd/scripts/tk8.4/demos/tclIndex
Xlib/vmd/scripts/tk8.4/demos/tcolor
Xlib/vmd/scripts/tk8.4/demos/text.tcl
Xlib/vmd/scripts/tk8.4/demos/timer
Xlib/vmd/scripts/tk8.4/demos/twind.tcl
Xlib/vmd/scripts/tk8.4/demos/vscale.tcl
Xlib/vmd/scripts/tk8.4/demos/widget
Xlib/vmd/scripts/python/AtomSel.py
Xlib/vmd/scripts/python/Label.py
Xlib/vmd/scripts/python/Material.py
Xlib/vmd/scripts/python/Molecule.py
Xlib/vmd/scripts/python/VMD.py
Xlib/vmd/scripts/python/startvmd.py
Xlib/vmd/scripts/python/testMolecule.py
Xlib/vmd/scripts/python/testdisplay.py
Xlib/vmd/plugins/include/vmdplugin.h
Xlib/vmd/plugins/include/molfile_plugin.h
Xlib/vmd/plugins/FREEBSD/molfile/cpmdplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/psfplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/pdbplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/dcdplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/babelplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/gromacsplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/parmplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/crdplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/namdbinplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/binposplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/webpdbplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/graspplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/stlplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/cubeplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/edmplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/ccp4plugin.so
Xlib/vmd/plugins/FREEBSD/molfile/dsn6plugin.so
Xlib/vmd/plugins/FREEBSD/molfile/brixplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/pltplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/parm7plugin.so
Xlib/vmd/plugins/FREEBSD/molfile/raster3dplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/rst7plugin.so
Xlib/vmd/plugins/FREEBSD/molfile/xyzplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/corplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/moldenplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/phiplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/grdplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/dxplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/mapplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/avsplugin.so
Xlib/vmd/plugins/FREEBSD/molfile/fs4plugin.so
Xlib/vmd/plugins/FREEBSD/molfile/libmolfile_plugin.a
Xlib/vmd/plugins/FREEBSD/molfile/libmolfile_plugin.h
Xlib/vmd/plugins/FREEBSD/tcl/psfgen1.3/libpsfgen.so
Xlib/vmd/plugins/FREEBSD/tcl/psfgen1.3/ug.pdf
Xlib/vmd/plugins/FREEBSD/tcl/psfgen1.3/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/autoionize1.0/ions.top
Xlib/vmd/plugins/noarch/tcl/autoionize1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/autoionize1.0/autoionize.tcl
Xlib/vmd/plugins/noarch/tcl/solvate1.2/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/solvate1.2/solvate.tcl
Xlib/vmd/plugins/noarch/tcl/solvate1.2/wat.psf
Xlib/vmd/plugins/noarch/tcl/solvate1.2/wat.pdb
Xlib/vmd/plugins/noarch/tcl/solvate1.2/wat.top
Xlib/vmd/plugins/noarch/tcl/autoimd1.3/ug.pdf
Xlib/vmd/plugins/noarch/tcl/autoimd1.3/template.namd
Xlib/vmd/plugins/noarch/tcl/autoimd1.3/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/autoimd1.3/autoimd-local.tcl
Xlib/vmd/plugins/noarch/tcl/autoimd1.3/autoimd.tcl
Xlib/vmd/plugins/noarch/tcl/namdrun0.1/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/namdrun0.1/namdrun.tcl
Xlib/vmd/plugins/noarch/tcl/jmvexport1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/jmvexport1.0/jmvexport.tcl
Xlib/vmd/plugins/noarch/tcl/vmdmovie1.1/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/vmdmovie1.1/vmdmovie.tcl
Xlib/vmd/plugins/noarch/tcl/aligntool1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/aligntool1.0/cealign.tcl
Xlib/vmd/plugins/noarch/tcl/aligntool1.0/aligntool.tcl
Xlib/vmd/plugins/noarch/tcl/contactmap1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/contactmap1.0/contactmap.tcl
Xlib/vmd/plugins/noarch/tcl/timeline1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/timeline1.0/timeline.tcl
Xlib/vmd/plugins/noarch/tcl/ramaplot1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/ramaplot1.0/ramaplot.tcl
Xlib/vmd/plugins/noarch/tcl/rmsd1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/rmsd1.0/rmsd.tcl
Xlib/vmd/plugins/noarch/tcl/membrane1.0/popc_box.psf
Xlib/vmd/plugins/noarch/tcl/membrane1.0/pope_box.psf
Xlib/vmd/plugins/noarch/tcl/membrane1.0/pope_box.pdb
Xlib/vmd/plugins/noarch/tcl/membrane1.0/top_all27_prot_lipid.inp
Xlib/vmd/plugins/noarch/tcl/membrane1.0/popc_box.pdb
Xlib/vmd/plugins/noarch/tcl/membrane1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/membrane1.0/membrane.tcl
Xlib/vmd/plugins/noarch/tcl/zoomseq1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/zoomseq1.0/zoomseq.tcl
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/CVS/Root
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/CVS/Repository
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/CVS/Entries
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/bindings.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/changes.txt
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/demopic.gif
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/dump.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/idebug.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/index.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/license.terms
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/limits.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/style.css
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/observe.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/perl.txt
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/plugin.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/procs.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/purpose.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/start.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/tkcon.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/todo.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/nontcl.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/CVS/Root
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/CVS/Repository
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/CVS/Entries
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/ChangeLog
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/README.txt
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/index.html
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/tkcon.tcl
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-modified.tcl
Xlib/vmd/plugins/noarch/tcl/vmdtkcon1.0/vmdtkcon.tcl
Xlib/vmd/plugins/noarch/tcl/imdmenu1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/imdmenu1.0/imdmenu.tcl
Xlib/vmd/plugins/noarch/tcl/pdbtool1.0/pkgIndex.tcl
Xlib/vmd/plugins/noarch/tcl/pdbtool1.0/pdbtool.tcl
Xlib/vmd/.vmdsensors
Xlib/vmd/.vmdrc
Xlib/vmd/scripts/tcl
Xlib/vmd/scripts/tcl8.0
Xlib/vmd/scripts/tk
Xlib/vmd/scripts/tk8.0
X@dirrm lib/vmd/scripts/vmd/CVS
X@dirrm lib/vmd/scripts/vmd
X@dirrm lib/vmd/scripts/tk8.4/msgs
X@dirrm lib/vmd/scripts/tk8.4/images
X@dirrm lib/vmd/scripts/tk8.4/demos/images
X@dirrm lib/vmd/scripts/tk8.4/demos
X@dirrm lib/vmd/scripts/tk8.4
X@dirrm lib/vmd/scripts/tcl8.4/tcltest2.2
X@dirrm lib/vmd/scripts/tcl8.4/opt0.4
X@dirrm lib/vmd/scripts/tcl8.4/msgcat1.3
X@dirrm lib/vmd/scripts/tcl8.4/http2.4
X@dirrm lib/vmd/scripts/tcl8.4/http1.0
X@dirrm lib/vmd/scripts/tcl8.4/encoding
X@dirrm lib/vmd/scripts/tcl8.4
X@dirrm lib/vmd/scripts/python
X@dirrm lib/vmd/scripts/CVS
X@dirrm lib/vmd/scripts
X@dirrm lib/vmd/plugins/noarch/tcl/zoomseq1.0
X@dirrm lib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs/CVS
X@dirrm lib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/docs
X@dirrm lib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3/CVS
X@dirrm lib/vmd/plugins/noarch/tcl/vmdtkcon1.0/tkcon-2.3
X@dirrm lib/vmd/plugins/noarch/tcl/vmdtkcon1.0
X@dirrm lib/vmd/plugins/noarch/tcl/vmdmovie1.1
X@dirrm lib/vmd/plugins/noarch/tcl/timeline1.0
X@dirrm lib/vmd/plugins/noarch/tcl/solvate1.2
X@dirrm lib/vmd/plugins/noarch/tcl/rmsd1.0
X@dirrm lib/vmd/plugins/noarch/tcl/ramaplot1.0
X@dirrm lib/vmd/plugins/noarch/tcl/pdbtool1.0
X@dirrm lib/vmd/plugins/noarch/tcl/namdrun0.1
X@dirrm lib/vmd/plugins/noarch/tcl/membrane1.0
X@dirrm lib/vmd/plugins/noarch/tcl/jmvexport1.0
X@dirrm lib/vmd/plugins/noarch/tcl/imdmenu1.0
X@dirrm lib/vmd/plugins/noarch/tcl/contactmap1.0
X@dirrm lib/vmd/plugins/noarch/tcl/autoionize1.0
X@dirrm lib/vmd/plugins/noarch/tcl/autoimd1.3
X@dirrm lib/vmd/plugins/noarch/tcl/aligntool1.0
X@dirrm lib/vmd/plugins/noarch/tcl
X@dirrm lib/vmd/plugins/noarch
X@dirrm lib/vmd/plugins/include
X@dirrm lib/vmd/plugins/FREEBSD/tcl/psfgen1.3
X@dirrm lib/vmd/plugins/FREEBSD/tcl
X@dirrm lib/vmd/plugins/FREEBSD/molfile
X@dirrm lib/vmd/plugins/FREEBSD
X@dirrm lib/vmd/plugins
X@dirrm lib/vmd/doc
X@dirrm lib/vmd
END-of-vmd/pkg-plist
echo x - vmd/pkg-descr
sed 's/^X//' >vmd/pkg-descr << 'END-of-vmd/pkg-descr'
XVMD is a molecular visualization program for displaying, animating, and
Xanalyzing large biomolecular systems using 3-D graphics and built-in scripting.
X
XWWW: http://www.ks.uiuc.edu/Research/vmd/
END-of-vmd/pkg-descr
echo x - vmd/distinfo
sed 's/^X//' >vmd/distinfo << 'END-of-vmd/distinfo'
XMD5 (vmd-1.8.2.src.tar.gz) = 8ad9cb90d954740f3b54be585526698d
XSIZE (vmd-1.8.2.src.tar.gz) = 7192878
END-of-vmd/distinfo
exit
>Release-Note:
>Audit-Trail:
>Unformatted:
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