Skip site navigation (1)Skip section navigation (2)
Date:      Mon, 6 May 2019 08:51:31 GMT
From:      pkg-fallout@FreeBSD.org
To:        yuri@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - head-amd64-default][science/py-GPy] Failed for py27-GPy-1.9.6 in build
Message-ID:  <201905060851.x468pVNK097843@beefy12.nyi.freebsd.org>

next in thread | raw e-mail | index | archive | help
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: amdmi3@FreeBSD.org
Ident:          $FreeBSD: head/science/py-GPy/Makefile 498038 2019-04-05 23:27:57Z amdmi3 $
Log URL:        http://beefy12.nyi.freebsd.org/data/head-amd64-default/p500844_s347134/logs/py27-GPy-1.9.6.log
Build URL:      http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p500844_s347134
Log:

=>> Building science/py-GPy
build started at Mon May  6 08:51:04 UTC 2019
port directory: /usr/ports/science/py-GPy
package name: py27-GPy-1.9.6
building for: FreeBSD head-amd64-default-job-08 13.0-CURRENT FreeBSD 13.0-CURRENT 1300022 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/py-GPy/Makefile 498038 2019-04-05 23:27:57Z amdmi3 $
Poudriere version: 3.2.8-3-g02cc9753
Host OSVERSION: 1300018
Jail OSVERSION: 1300022
Job Id: 08




!!! Jail is newer than host. (Jail: 1300022, Host: 1300018) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
OSVERSION=1300022
UNAME_v=FreeBSD 13.0-CURRENT 1300022
UNAME_r=13.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-3-g02cc9753
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-amd64-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=py27
DEPENDS_ARGS=
MAKE_ARGS= FLAVOR=py27
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27  HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-GPy/work-py27/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27  HOME=/wrkdirs/usr/ports/science/py-GPy/work-py27 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-GPy/work-py27/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing "  CPP="cpp" CPPFLAGS="-isystem /usr/local/include"  LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib"  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA
 ="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python2.7  PYTHON_LIBDIR=lib/python2.7  PYTHON_PLATFORM=freebsd13  PYTHON_SITELIBDIR=lib/python2.7/site-packages  PYTHON_SUFFIX=27  PYTHON_VER=2.7  PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/GPy"  EXAMPLESDIR="share/examples/GPy"  DATADIR="share/GPy"  WWWDIR="www/GPy"  ETCDIR="etc/GPy"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/GPy DOCSDIR=/usr/local/share/doc/GPy EXAMPLESDIR=/usr/local/share/examples/GPy  WWWDIR=/usr/local/www/GPy ETCDIR=/usr/local/etc/GPy
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=	true
.endif
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: x86_64-unknown-freebsd13.0 Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=amd64
OPSYS=FreeBSD
_OSRELEASE=13.0-CURRENT
OSREL=13.0
OSVERSION=1300022
PYTHONBASE=/usr/local
HAVE_COMPAT_IA32_KERN=YES
CONFIGURE_MAX_CMD_LEN=262144
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-GPy-1.9.6 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5_5.txz
[head-amd64-default-job-08] Installing pkg-1.10.5_5...
[head-amd64-default-job-08] Extracting pkg-1.10.5_5: .......... done
===>   py27-GPy-1.9.6 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py27-GPy-1.9.6
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-GPy-1.9.6 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-GPy-1.9.6 for building
=> SHA256 Checksum OK for GPy-1.9.6.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-GPy-1.9.6 for building
===>  Extracting for py27-GPy-1.9.6
=> SHA256 Checksum OK for GPy-1.9.6.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py27-GPy-1.9.6
===========================================================================
=======================<phase: build-depends  >============================
===>   py27-GPy-1.9.6 depends on package: py27-numpy>0 - not found
===>   Installing existing package /packages/All/py27-numpy-1.16.1_2,1.txz
[head-amd64-default-job-08] Installing py27-numpy-1.16.1_2,1...
[head-amd64-default-job-08] `-- Installing blas-3.5.0_5...
<snip>
copying GPy/inference/latent_function_inference/exact_studentt_inference.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/expectation_propagation.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/dtc.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/fitc.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/var_gauss.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/svgp.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/pep.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/var_dtc_parallel.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/vardtc_svi_multiout_miss.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/var_dtc.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/vardtc_svi_multiout.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/inferenceX.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/vardtc_md.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/exact_gaussian_inference.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/posterior.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/laplace.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
copying GPy/inference/latent_function_inference/gaussian_grid_inference.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/inference/latent_function_inference
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/bernoulli.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/poisson.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/multioutput_likelihood.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/exponential.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/student_t.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/gamma.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/gaussian.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/loggaussian.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/binomial.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/loglogistic.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/mixed_noise.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/likelihood.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/link_functions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
copying GPy/likelihoods/weibull.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/likelihoods
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/additive.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/compound.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/kernel.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/identity.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/mlpext.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/constant.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/linear.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/piecewise_linear.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
copying GPy/mappings/mlp.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/mappings
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/classification.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/non_gaussian.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/dimensionality_reduction.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/regression.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
copying GPy/examples/state_space.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/examples
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/model_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/rv_transformation_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/gp_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/fitc.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/prior_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/util_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/quadrature_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/pickle_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/kernel_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/tp_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/mpi_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/state_space_main_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/gpy_kernels_state_space_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/mapping_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/grid_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/variational_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/likelihood_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/minibatch_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/ep_likelihood_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/cython_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/meanfunc_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/misc_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/linalg_test.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/examples_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/plotting_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/inference_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/svgp_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/link_function_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/serialization_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
copying GPy/testing/pep_tests.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/testing
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/classification.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/subarray_and_sorting.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/mocap.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/decorators.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/normalizer.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/squashers.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/debug.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/quad_integrate.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/linalg.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/input_warping_functions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/ln_diff_erfs.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/multioutput.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/diag.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/functions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/linalg_gpu.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/datasets.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/parallel.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/cluster_with_offset.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/netpbmfile.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/misc.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/initialization.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/config.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/choleskies.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/gpu_init.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/block_matrices.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/pca.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/univariate_Gaussian.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/warping_functions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting
copying GPy/plotting/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting
copying GPy/plotting/abstract_plotting_library.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting
copying GPy/plotting/Tango.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/plot_util.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/kernel_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/data_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/gp_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/inference_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
copying GPy/plotting/gpy_plot/latent_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/gpy_plot
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/maps.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/base_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/visualize.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/img_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/priors_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/svig_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/ssgplvm.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/mapping_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/util.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/defaults.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/plot_definitions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
copying GPy/plotting/matplot_dep/variational_plots.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep/controllers
copying GPy/plotting/matplot_dep/controllers/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep/controllers
copying GPy/plotting/matplot_dep/controllers/imshow_controller.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep/controllers
copying GPy/plotting/matplot_dep/controllers/axis_event_controller.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/matplot_dep/controllers
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/plotly_dep
copying GPy/plotting/plotly_dep/__init__.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/plotly_dep
copying GPy/plotting/plotly_dep/defaults.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/plotly_dep
copying GPy/plotting/plotly_dep/plot_definitions.py -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/plotting/plotly_dep
running egg_info
writing requirements to GPy.egg-info/requires.txt
writing GPy.egg-info/PKG-INFO
writing top-level names to GPy.egg-info/top_level.txt
writing dependency_links to GPy.egg-info/dependency_links.txt
reading manifest file 'GPy.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'README.rst'
writing manifest file 'GPy.egg-info/SOURCES.txt'
copying GPy/defaults.cfg -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy
copying GPy/installation.cfg -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy
copying GPy/kern/src/coregionalize_cython.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/coregionalize_cython.pyx -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/stationary_cython.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/stationary_cython.pyx -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/stationary_utils.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/stationary_utils.h -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
copying GPy/kern/src/sympy_helpers.h -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
creating build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/todo
copying GPy/kern/src/todo/odekern1.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/todo
copying GPy/models/state_space_cython.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/models
copying GPy/models/state_space_cython.pyx -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/models
copying GPy/util/choleskies_cython.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/choleskies_cython.pyx -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/data_resources.json -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/football_teams.json -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/linalg_cython.c -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
copying GPy/util/linalg_cython.pyx -> build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/util
running build_ext
building 'GPy.kern.src.stationary_cython' extension
creating build/temp.freebsd-13.0-CURRENT-amd64-2.7
creating build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy
creating build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern
creating build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src
cc -DNDEBUG -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I. -I/usr/local/include/python2.7 -c GPy/kern/src/stationary_cython.c -o build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/stationary_cython.o -fopenmp -O3
In file included from GPy/kern/src/stationary_cython.c:242:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12:
In file included from /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1822:
/usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: "Using deprecated NumPy API, disable it with "          "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it with " \
 ^
1 warning generated.
cc -DNDEBUG -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python2.7/site-packages/numpy/core/include -I. -I/usr/local/include/python2.7 -c GPy/kern/src/stationary_utils.c -o build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/stationary_utils.o -fopenmp -O3
cc -shared -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/stationary_cython.o build/temp.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/stationary_utils.o -L/usr/local/lib -lpython2.7 -o build/lib.freebsd-13.0-CURRENT-amd64-2.7/GPy/kern/src/stationary_cython.so -lgomp
ld: error: unable to find library -lgomp
cc: error: linker command failed with exit code 1 (use -v to see invocation)
error: command 'cc' failed with exit status 1
*** Error code 1

Stop.
make: stopped in /usr/ports/science/py-GPy



Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?201905060851.x468pVNK097843>