From owner-svn-ports-head@freebsd.org Sat May 16 00:14:17 2020 Return-Path: Delivered-To: svn-ports-head@mailman.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.nyi.freebsd.org (Postfix) with ESMTP id EE0BB2DE41A; Sat, 16 May 2020 00:14:17 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) server-signature RSA-PSS (4096 bits) client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 49P5P562Pvz4f2S; Sat, 16 May 2020 00:14:17 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id B03885063; Sat, 16 May 2020 00:14:17 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id 04G0EHSJ013179; Sat, 16 May 2020 00:14:17 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id 04G0EGwB013175; Sat, 16 May 2020 00:14:16 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <202005160014.04G0EGwB013175@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Sat, 16 May 2020 00:14:16 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r535340 - in head/biology: . py-pandas-charm X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: in head/biology: . py-pandas-charm X-SVN-Commit-Revision: 535340 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-BeenThere: svn-ports-head@freebsd.org X-Mailman-Version: 2.1.33 Precedence: list List-Id: SVN commit messages for the ports tree for head List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Sat, 16 May 2020 00:14:18 -0000 Author: yuri Date: Sat May 16 00:14:16 2020 New Revision: 535340 URL: https://svnweb.freebsd.org/changeset/ports/535340 Log: New port: biology/py-pandas-charm: Library for getting character matrices into and out of pandas Added: head/biology/py-pandas-charm/ head/biology/py-pandas-charm/Makefile (contents, props changed) head/biology/py-pandas-charm/distinfo (contents, props changed) head/biology/py-pandas-charm/pkg-descr (contents, props changed) Modified: head/biology/Makefile Modified: head/biology/Makefile ============================================================================== --- head/biology/Makefile Sat May 16 00:13:09 2020 (r535339) +++ head/biology/Makefile Sat May 16 00:14:16 2020 (r535340) @@ -134,6 +134,7 @@ SUBDIR += py-multiqc SUBDIR += py-orange3-bioinformatics SUBDIR += py-orange3-single-cell + SUBDIR += py-pandas-charm SUBDIR += py-pyfaidx SUBDIR += py-pysam SUBDIR += py-xenaPython Added: head/biology/py-pandas-charm/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/py-pandas-charm/Makefile Sat May 16 00:14:16 2020 (r535340) @@ -0,0 +1,22 @@ +# $FreeBSD$ + +PORTNAME= pandas-charm +DISTVERSION= 0.3.0 +CATEGORIES= biology python +MASTER_SITES= CHEESESHOP +PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Library for getting character matrices into and out of pandas + +LICENSE= MIT +LICENSE_FILE= ${WRKSRC}/LICENSE.txt + +RUN_DEPEDNS= ${PYTHON_PKGNAMEPREFIX}pandas>0:math/py-pandas@${FLAVOR} + +USES= python +USE_PYTHON= distutils autoplist + +NO_ARCH= yes + +.include Added: head/biology/py-pandas-charm/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/py-pandas-charm/distinfo Sat May 16 00:14:16 2020 (r535340) @@ -0,0 +1,3 @@ +TIMESTAMP = 1589587604 +SHA256 (pandas-charm-0.3.0.tar.gz) = 203d1c6c369d1f966fd7ff06053dd641db214f5bc16dd694e269f03de10ee45b +SIZE (pandas-charm-0.3.0.tar.gz) = 7597 Added: head/biology/py-pandas-charm/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/biology/py-pandas-charm/pkg-descr Sat May 16 00:14:16 2020 (r535340) @@ -0,0 +1,5 @@ +pandas-charm is a small Python package for getting character matrices +(alignments) into and out of pandas. Use this library to make pandas +interoperable with BioPython and DendroPy. + +WWW: https://github.com/jmenglund/pandas-charm