From owner-freebsd-ports@freebsd.org Wed Jun 28 19:52:03 2017 Return-Path: Delivered-To: freebsd-ports@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2001:1900:2254:206a::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 57E65DA8FC0 for ; Wed, 28 Jun 2017 19:52:03 +0000 (UTC) (envelope-from david@catwhisker.org) Received: from albert.catwhisker.org (mx.catwhisker.org [198.144.209.73]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mx1.freebsd.org (Postfix) with ESMTPS id 2BEE0759; Wed, 28 Jun 2017 19:52:02 +0000 (UTC) (envelope-from david@catwhisker.org) Received: from albert.catwhisker.org (localhost [127.0.0.1]) by albert.catwhisker.org (8.15.2/8.15.2) with ESMTP id v5SJptqe044579; Wed, 28 Jun 2017 19:51:55 GMT (envelope-from david@albert.catwhisker.org) Received: (from david@localhost) by albert.catwhisker.org (8.15.2/8.15.2/Submit) id v5SJptBQ044578; Wed, 28 Jun 2017 12:51:55 -0700 (PDT) (envelope-from david) Date: Wed, 28 Jun 2017 12:51:55 -0700 From: David Wolfskill To: Joseph Mingrone Cc: freebsd-ports@freebsd.org Subject: Re: math/R: Build failure after PORTREVISION for shlib change Message-ID: <20170628195155.GC1241@albert.catwhisker.org> References: <20170628120843.GG1241@albert.catwhisker.org> <86y3sbdhvx.fsf@phe.ftfl.ca> MIME-Version: 1.0 Content-Type: multipart/signed; micalg=pgp-sha512; protocol="application/pgp-signature"; boundary="y6IdC9+/ilDqdjNX" Content-Disposition: inline In-Reply-To: <86y3sbdhvx.fsf@phe.ftfl.ca> User-Agent: Mutt/1.8.3 (2017-05-23) X-BeenThere: freebsd-ports@freebsd.org X-Mailman-Version: 2.1.23 Precedence: list List-Id: Porting software to FreeBSD List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Wed, 28 Jun 2017 19:52:03 -0000 --y6IdC9+/ilDqdjNX Content-Type: text/plain; charset=us-ascii Content-Disposition: inline Content-Transfer-Encoding: quoted-printable On Wed, Jun 28, 2017 at 04:36:18PM -0300, Joseph Mingrone wrote: > Hi David, >=20 > So far I haven't been able to reproduce any problems in an > 11.0-RELEASE-p1 jail. Could you send your list of port options? If I > can't reproduce any issues with the same options turned on, I will ask > you for a full build log. >=20 > Joseph Thanks for taking a look. g1-227(11.1)[2] make -C /usr/ports/math/R showconfig =3D=3D=3D> The following configuration options are available for R-3.4.0_1: ICU=3Don: Unicode support via ICU INFO=3Don: GNU info manuals LDOUBLE=3Don: Long double data type LETTER=3Don: US letter paper LIBR=3Don: Shared R library MEMPROF=3Doff: Memory profiling via Rprofmem() and tracemem() NLS=3Don: Native Language Support RPROF=3Don: R profiling via Rprof() X11=3Don: X11 graphics device =3D=3D=3D=3D> Require GCC LTO=3Don: Use Link Time Optimization OPENMP=3Don: Parallel processing support via OpenMP =3D=3D=3D=3D> Require X11 GHOSTSCRIPT=3Don: Graphics device for bitmap files via Ghostscript JPEG=3Don: JPEG graphics device CAIROPANGO=3Don: Cairo graphics device and Pango multi-language text PNG=3Don: PNG graphics device TCLTK=3Don: Tcl/Tk GUI toolkit support TEXDOCS=3Don: Build/Install TeX-dependent documentation files TIFF=3Don: TIFF image format support =3D=3D=3D=3D> Options available for the single BLAS: you have to select exa= ctly one of them ATLAS=3Doff: ATLAS BLAS implementation OPENBLAS=3Doff: OpenBLAS BLAS implementation NETLIB=3Doff: Netlib BLAS implementation RBLAS=3Don: Use R-bundled BLAS implementation =3D=3D=3D> Use 'make config' to modify these settings g1-227(11.1)[3]=20 I also placed both "normal" and gzipped copies of the typescript =66rom the (multiple) portmaster runs in ; see R.log (or R.log.gz). (I had run portmaster; it built a few things, tried math/R & died. I re-started portmaster, eliding math/R, but portmaster found it anyway... though it didn't show up in the list until several other ports were built successfully. I then tried again, skipping both math/R and databases/R-cran-DBI; all of the specified ports built OK. Then I tried just math/R & databases/R-cran-DBI; those failed (as before). I then specified 'MAKE_JOBS_UNSAFE=3Dyes' in /etc/make.conf & tried the laast run again; still failed. Each time, I appended to the typescript.) Just in case it's relevant, as /usr/local/bin/gcc-ar5 is from gcc5-5.4.0_2: g1-227(11.1)[5] make -C /usr/ports/lang/gcc5 showconfig =3D=3D=3D> The following configuration options are available for gcc5-5.4.0= _2: BOOTSTRAP=3Don: Build using a full bootstrap GRAPHITE=3Doff: Support for Graphite loop optimizations JAVA=3Don: Java platform support =3D=3D=3D> Use 'make config' to modify these settings Peace, david --=20 David H. Wolfskill david@catwhisker.org Do Congress's recent actions on health care qualify as "terrorist acts?" See http://www.catwhisker.org/~david/publickey.gpg for my public key. --y6IdC9+/ilDqdjNX Content-Type: application/pgp-signature; name="signature.asc" -----BEGIN PGP SIGNATURE----- Version: GnuPG v2 iQF8BAEBCgBmBQJZVAjbXxSAAAAAAC4AKGlzc3Vlci1mcHJAbm90YXRpb25zLm9w ZW5wZ3AuZmlmdGhob3JzZW1hbi5uZXRDQ0I3Q0VGOTE3QTgwMUY0MzA2NEQ3N0Ix NTM5Q0M0MEEwNDlFRTE3AAoJEBU5zECgSe4XBv4IANQEL3D6gMfk69TMi/x73448 6RGNg4K9kOE4dDsDS/QZe48EG2iieVuEE2oAxAGyeomfR6mH0Ju0yYWUa1J+cgVW HbWFIGD4A5gHFQjgvz6useOvS+KNWa9oayKWBHtmEugsUDf9SXMcRxfh5CyOvE/w 0kJu2H4hrIQq1b+3z18w1cXUEhqC3wKShEUm6x85rhfDVKy5di71DPU5iDT+7CTc r+6q6IGfEi3YZazSwpekYO0ifX+hbbajYktZrN/vd2xhbT8efS/8E5lB0thH9l9h ZIzILfbhKJ7UlYsF/+7mywAjN3dgnWmvUuGNCMGYdyPudPMPgSpMSfkIeaPztkk= =czsx -----END PGP SIGNATURE----- --y6IdC9+/ilDqdjNX--