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Date:      Mon, 29 Apr 2019 15:17:33 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - head-armv6-default][biology/seqio] Failed for seqio-1.2.2_1 in build
Message-ID:  <201904291517.x3TFHXsU062901@beefy8.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     ports@FreeBSD.org
Last committer: amdmi3@FreeBSD.org
Ident:          $FreeBSD: head/biology/seqio/Makefile 454906 2017-11-26 09:00:21Z amdmi3 $
Log URL:        http://beefy8.nyi.freebsd.org/data/head-armv6-default/p500273_s346796/logs/seqio-1.2.2_1.log
Build URL:      http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p500273_s346796
Log:

=>> Building biology/seqio
build started at Mon Apr 29 15:17:12 UTC 2019
port directory: /usr/ports/biology/seqio
package name: seqio-1.2.2_1
building for: FreeBSD head-armv6-default-job-16 13.0-CURRENT FreeBSD 13.0-CURRENT 1300021 arm
maintained by: ports@FreeBSD.org
Makefile ident:      $FreeBSD: head/biology/seqio/Makefile 454906 2017-11-26 09:00:21Z amdmi3 $
Poudriere version: 3.2.8-3-g02cc9753
Host OSVERSION: 1300009
Jail OSVERSION: 1300021
Job Id: 16




!!! Jail is newer than host. (Jail: 1300021, Host: 1300009) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
OSVERSION=1300021
UNAME_v=FreeBSD 13.0-CURRENT 1300021
UNAME_r=13.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
QEMU_EMULATING=1
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-3-g02cc9753
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
===> The following configuration options are available for seqio-1.2.2_1:
     DOCS=on: Build and/or install documentation
     EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
ports@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seqio/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seqio/work  HOME=/wrkdirs/usr/ports/biology/seqio/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seqio/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seqio/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seqio/work  HOME=/wrkdirs/usr/ports/biology/seqio/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seqio/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PORTDOCS="" PORTEXAMPLES="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/seqio"  EXAMPLESDIR="share/examples/seqio"  DATADIR="share/seqio"  WWWDIR="www/seqio"  ETCDIR="etc/seqio"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/seqio DOCSDIR=/usr/local/share/doc/seqio EXAMPLESDIR=/usr/local/share/examples/seqio  WWWDIR=/usr/local/www/seqio ETCDIR=/usr/local/etc/seqio
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=arm
MACHINE_ARCH=armv6
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2

# stable/10 includes src.conf too late but make.conf is in sys.mk
.if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*}
# Disable build of llib now that head no longer has lint(1)
LINT=	true
.endif
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_9d218390=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_ALTCCVERSION_9d218390=none
_CXXINTERNAL_9c45a5b1=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_9d218390_58173849=yes
CC_OUTPUT_9d218390_9bdba57c=yes
CC_OUTPUT_9d218390_6a4fe7f5=yes
CC_OUTPUT_9d218390_6bcac02b=yes
CC_OUTPUT_9d218390_67d20829=yes
CC_OUTPUT_9d218390_bfa62e83=yes
CC_OUTPUT_9d218390_f0b4d593=yes
CC_OUTPUT_9d218390_308abb44=yes
CC_OUTPUT_9d218390_f00456e5=yes
CC_OUTPUT_9d218390_65ad290d=yes
CC_OUTPUT_9d218390_f2776b26=yes
CC_OUTPUT_9d218390_b2657cc3=yes
CC_OUTPUT_9d218390_380987f7=yes
CC_OUTPUT_9d218390_160933ec=yes
CC_OUTPUT_9d218390_fb62803b=yes
_OBJC_CCVERSION_9d218390=FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0) Target: armv6-unknown-freebsd13.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin
_OBJC_ALTCCVERSION_9d218390=none
ARCH=armv6
OPSYS=FreeBSD
_OSRELEASE=13.0-CURRENT
OSREL=13.0
OSVERSION=1300021
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=262144
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
---Begin make.nxb.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
---End make.nxb.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  1024
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===>   NOTICE:

The seqio port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

<snip>
  %293:gpr = MOVi 67, 14, $noreg, $noreg
  CMPri %0:gpr, 68, 14, $noreg, implicit-def $cpsr
  %821:gpr = COPY %293:gpr
  Bcc %bb.231, 11, killed $cpsr
  B %bb.230

bb.230.cond.false.i17.i.1:
; predecessors: %bb.229
  successors: %bb.231(0x80000000); %bb.231(100.00%)

  %258:gpr = LDRi12 %1:gpr, 2368, 14, $noreg :: (load 4 from %ir.arrayidx.i16.i.1)
  %821:gpr = COPY %258:gpr

bb.231.__sbtoupper.exit19.i.1:
; predecessors: %bb.229, %bb.230
  successors: %bb.246(0x20000000), %bb.232(0x60000000); %bb.246(25.00%), %bb.232(75.00%)

  %259:gpr = COPY %821:gpr
  %260:gpr = nsw SUBrr %257:gpr, %259:gpr, 14, $noreg, $noreg
  CMPri %291:gprnopc, 0, 14, $noreg, implicit-def $cpsr
  Bcc %bb.232, 1, killed $cpsr

bb.246:
; predecessors: %bb.231
  successors: %bb.8(0x80000000); %bb.8(100.00%)

  %716:gpr = COPY %260:gpr
  B %bb.8

bb.232.__sbtoupper.exit19.i.1:
; predecessors: %bb.231
  successors: %bb.8(0x2aaaaaab), %bb.233(0x55555555); %bb.8(33.33%), %bb.233(66.67%)

  CMPri %260:gpr, 0, 14, $noreg, implicit-def $cpsr
  %716:gpr = COPY %260:gpr
  Bcc %bb.8, 1, killed $cpsr
  B %bb.233

bb.233.for.inc.i.1:
; predecessors: %bb.232
  successors: %bb.234(0x40000000), %bb.235(0x40000000); %bb.234(50.00%), %bb.235(50.00%)

  %294:gprnopc = LDRBi12 %277:gpr, 2, 14, $noreg :: (load 1 from %ir.incdec.ptr.i.1)
  %262:gpr = COPY %294:gprnopc
  CMPrr %0:gpr, %294:gprnopc, 14, $noreg, implicit-def $cpsr
  %822:gpr = COPY %262:gpr
  Bcc %bb.235, 13, killed $cpsr
  B %bb.234

bb.234.cond.false.i.i.2:
; predecessors: %bb.233
  successors: %bb.235(0x80000000); %bb.235(100.00%)

  %295:gpr = ADDrsi %1:gpr, %294:gprnopc, 18, 14, $noreg, $noreg
  %263:gpr = LDRi12 %295:gpr, 2100, 14, $noreg :: (load 4 from %ir.arrayidx.i.i.2)
  %822:gpr = COPY %263:gpr

bb.235.__sbtoupper.exit.i.2:
; predecessors: %bb.233, %bb.234
  successors: %bb.236(0x40000000), %bb.237(0x40000000); %bb.236(50.00%), %bb.237(50.00%)

  %264:gpr = COPY %822:gpr
  %296:gpr = MOVi 71, 14, $noreg, $noreg
  CMPri %0:gpr, 72, 14, $noreg, implicit-def $cpsr
  %823:gpr = COPY %296:gpr
  Bcc %bb.237, 11, killed $cpsr
  B %bb.236

bb.236.cond.false.i17.i.2:
; predecessors: %bb.235
  successors: %bb.237(0x80000000); %bb.237(100.00%)

  %265:gpr = LDRi12 %1:gpr, 2384, 14, $noreg :: (load 4 from %ir.arrayidx.i16.i.2)
  %823:gpr = COPY %265:gpr

bb.237.__sbtoupper.exit19.i.2:
; predecessors: %bb.235, %bb.236
  successors: %bb.247(0x20000000), %bb.238(0x60000000); %bb.247(25.00%), %bb.238(75.00%)

  %266:gpr = COPY %823:gpr
  %267:gpr = nsw SUBrr %264:gpr, %266:gpr, 14, $noreg, $noreg
  CMPri %294:gprnopc, 0, 14, $noreg, implicit-def $cpsr
  Bcc %bb.238, 1, killed $cpsr

bb.247:
; predecessors: %bb.237
  successors: %bb.8(0x80000000); %bb.8(100.00%)

  %716:gpr = COPY %267:gpr
  B %bb.8

bb.238.__sbtoupper.exit19.i.2:
; predecessors: %bb.237
  successors: %bb.8(0x2aaaaaab), %bb.239(0x55555555); %bb.8(33.33%), %bb.239(66.67%)

  CMPri %267:gpr, 0, 14, $noreg, implicit-def $cpsr
  %716:gpr = COPY %267:gpr
  Bcc %bb.8, 1, killed $cpsr
  B %bb.239

bb.239.for.inc.i.2:
; predecessors: %bb.238
  successors: %bb.240(0x40000000), %bb.241(0x40000000); %bb.240(50.00%), %bb.241(50.00%)

  %297:gprnopc = LDRBi12 %277:gpr, 3, 14, $noreg :: (load 1 from %ir.incdec.ptr.i.2)
  %269:gpr = COPY %297:gprnopc
  CMPrr %0:gpr, %297:gprnopc, 14, $noreg, implicit-def $cpsr
  %824:gpr = COPY %269:gpr
  Bcc %bb.241, 13, killed $cpsr
  B %bb.240

bb.240.cond.false.i.i.3:
; predecessors: %bb.239
  successors: %bb.241(0x80000000); %bb.241(100.00%)

  %298:gpr = ADDrsi %1:gpr, %297:gprnopc, 18, 14, $noreg, $noreg
  %270:gpr = LDRi12 %298:gpr, 2100, 14, $noreg :: (load 4 from %ir.arrayidx.i.i.3)
  %824:gpr = COPY %270:gpr

bb.241.__sbtoupper.exit.i.3:
; predecessors: %bb.239, %bb.240
  successors: %bb.242(0x40000000), %bb.243(0x40000000); %bb.242(50.00%), %bb.243(50.00%)

  %271:gpr = COPY %824:gpr
  %299:gpr = MOVi 45, 14, $noreg, $noreg
  CMPri %0:gpr, 46, 14, $noreg, implicit-def $cpsr
  %825:gpr = COPY %299:gpr
  Bcc %bb.243, 11, killed $cpsr
  B %bb.242

bb.242.cond.false.i17.i.3:
; predecessors: %bb.241
  successors: %bb.243(0x80000000); %bb.243(100.00%)

  %272:gpr = LDRi12 %1:gpr, 2280, 14, $noreg :: (load 4 from %ir.arrayidx.i16.i.3)
  %825:gpr = COPY %272:gpr

bb.243.__sbtoupper.exit19.i.3:
; predecessors: %bb.241, %bb.242
  successors: %bb.248(0x20000000), %bb.244(0x60000000); %bb.248(25.00%), %bb.244(75.00%)

  %273:gpr = COPY %825:gpr
  %274:gpr = nsw SUBrr %271:gpr, %273:gpr, 14, $noreg, $noreg
  CMPri %297:gprnopc, 0, 14, $noreg, implicit-def $cpsr
  Bcc %bb.244, 1, killed $cpsr

bb.248:
; predecessors: %bb.243
  successors: %bb.8(0x80000000); %bb.8(100.00%)

  %716:gpr = COPY %274:gpr
  B %bb.8

bb.244.__sbtoupper.exit19.i.3:
; predecessors: %bb.243
  successors: %bb.8(0x2aaaaaab), %bb.10(0x55555555); %bb.8(33.33%), %bb.10(66.67%)

  CMPri %274:gpr, 0, 14, $noreg, implicit-def $cpsr
  %716:gpr = COPY %274:gpr
  Bcc %bb.8, 1, killed $cpsr
  B %bb.10

# End machine code for function intseqf_open.

*** Bad machine code: Using an undefined physical register ***
- function:    intseqf_open
- basic block: %bb.225 intseqf_read.exit (0x805394148)
- instruction: TCRETURNri %679:tcgpr, implicit $sp, implicit $r0, implicit killed $r1
- operand 2:   implicit $r0

*** Bad machine code: Using an undefined physical register ***
- function:    intseqf_open
- basic block: %bb.225 intseqf_read.exit (0x805394148)
- instruction: TCRETURNri %679:tcgpr, implicit $sp, implicit $r0, implicit killed $r1
- operand 3:   implicit killed $r1
fatal error: error in backend: Found 2 machine code errors.
cc: error: clang frontend command failed with exit code 70 (use -v to see invocation)
FreeBSD clang version 8.0.0 (tags/RELEASE_800/final 356365) (based on LLVM 8.0.0)
Target: armv6-unknown-freebsd13.0-gnueabihf
Thread model: posix
InstalledDir: /nxb-bin/usr/bin
cc: note: diagnostic msg: PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
cc: note: diagnostic msg: 
********************

PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
cc: note: diagnostic msg: /tmp/seqio-91be27.c
cc: note: diagnostic msg: /tmp/seqio-91be27.sh
cc: note: diagnostic msg: 

********************
*** Error code 70

Stop.
make[1]: stopped in /wrkdirs/usr/ports/biology/seqio/work/seqio-1.2.2
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/seqio



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