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Date:      Mon, 6 May 2019 17:26:51 GMT
From:      pkg-fallout@FreeBSD.org
To:        yuri@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - head-amd64-default][science/openmx] Failed for openmx-3.8.5_3 in build
Message-ID:  <201905061726.x46HQpdP000724@beefy12.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Last committer: gerald@FreeBSD.org
Ident:          $FreeBSD: head/science/openmx/Makefile 499638 2019-04-22 13:16:33Z gerald $
Log URL:        http://beefy12.nyi.freebsd.org/data/head-amd64-default/p500844_s347134/logs/openmx-3.8.5_3.log
Build URL:      http://beefy12.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p500844_s347134
Log:

=>> Building science/openmx
build started at Mon May  6 17:19:38 UTC 2019
port directory: /usr/ports/science/openmx
package name: openmx-3.8.5_3
building for: FreeBSD head-amd64-default-job-20 13.0-CURRENT FreeBSD 13.0-CURRENT 1300022 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/openmx/Makefile 499638 2019-04-22 13:16:33Z gerald $
Poudriere version: 3.2.8-3-g02cc9753
Host OSVERSION: 1300018
Jail OSVERSION: 1300022
Job Id: 20




!!! Jail is newer than host. (Jail: 1300022, Host: 1300018) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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---Begin OPTIONS List---
===> The following configuration options are available for openmx-3.8.5_3:
     SIMD=on: Use CPU-specific optimizations
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran8" FC="gfortran8" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc8" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc8" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/openmx/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/openmx/work  HOME=/wrkdirs/usr/ports/science/openmx/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/openmx/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
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--PLIST_SUB--
OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/openmx"  EXAMPLESDIR="share/examples/openmx"  DATADIR="share/openmx"  WWWDIR="www/openmx"  ETCDIR="etc/openmx"
--End PLIST_SUB--

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=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   openmx-3.8.5_3 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5_5.txz
[head-amd64-default-job-20] Installing pkg-1.10.5_5...
[head-amd64-default-job-20] Extracting pkg-1.10.5_5: .......... done
===>   openmx-3.8.5_3 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of openmx-3.8.5_3
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by openmx-3.8.5_3 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by openmx-3.8.5_3 for building
=> SHA256 Checksum OK for openmx/openmx3.8.tar.gz.
=> SHA256 Checksum OK for openmx/patch3.8.5.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by openmx-3.8.5_3 for building
===>  Extracting for openmx-3.8.5_3
=> SHA256 Checksum OK for openmx/openmx3.8.tar.gz.
=> SHA256 Checksum OK for openmx/patch3.8.5.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for openmx-3.8.5_3
===>   Converting DOS text files to UNIX text files
<snip>
      (                                                )
neb.c:2852:9: note: use '==' to turn this assignment into an equality comparison
  if (fp=input_find("<NEB.Atoms.SpeciesAndCoordinates") ) {
        ^
        ==
neb.c:2999:13: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
      if (fp=input_find(keyword) ) {
          ~~^~~~~~~~~~~~~~~~~~~~
neb.c:2999:13: note: place parentheses around the assignment to silence this warning
      if (fp=input_find(keyword) ) {
            ^
          (                     )
neb.c:2999:13: note: use '==' to turn this assignment into an equality comparison
      if (fp=input_find(keyword) ) {
            ^
            ==
neb.c:3102:9: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
  if (fp=input_find("<MD.Fixed.XYZ")) {
      ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
neb.c:3102:9: note: place parentheses around the assignment to silence this warning
  if (fp=input_find("<MD.Fixed.XYZ")) {
        ^
      (                             )
neb.c:3102:9: note: use '==' to turn this assignment into an equality comparison
  if (fp=input_find("<MD.Fixed.XYZ")) {
        ^
        ==
9 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c neb_run.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c neb_check.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c cellopt.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Allocate_NC.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_DFT_NC.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Set_CentOverlap_NC.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Set_SurfOverlap_NC.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Calc_OneTransmission.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Main_Analysis.c
TRAN_Main_Analysis.c:1062:70: warning: equality comparison result unused [-Wunused-comparison]
  if (TRAN_Channel_Nenergy * TRAN_Channel_Nkpoint <= 0) TRAN_Channel == 0;
                                                        ~~~~~~~~~~~~~^~~~
TRAN_Main_Analysis.c:1062:70: note: use '=' to turn this equality comparison into an assignment
  if (TRAN_Channel_Nenergy * TRAN_Channel_Nkpoint <= 0) TRAN_Channel == 0;
                                                                     ^~
                                                                     =
TRAN_Main_Analysis.c:3315:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if (fp = input_find("<NEGF.Channel.kpoint")) {
        ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
TRAN_Main_Analysis.c:3315:12: note: place parentheses around the assignment to silence this warning
    if (fp = input_find("<NEGF.Channel.kpoint")) {
           ^
        (                                      )
TRAN_Main_Analysis.c:3315:12: note: use '==' to turn this assignment into an equality comparison
    if (fp = input_find("<NEGF.Channel.kpoint")) {
           ^
           ==
TRAN_Main_Analysis.c:3361:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if (fp = input_find("<NEGF.Channel.Energy")){
        ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
TRAN_Main_Analysis.c:3361:12: note: place parentheses around the assignment to silence this warning
    if (fp = input_find("<NEGF.Channel.Energy")){
           ^
        (                                      )
TRAN_Main_Analysis.c:3361:12: note: use '==' to turn this assignment into an equality comparison
    if (fp = input_find("<NEGF.Channel.Energy")){
           ^
           ==
3 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Main_Analysis_NC.c
TRAN_Main_Analysis_NC.c:1008:70: warning: equality comparison result unused [-Wunused-comparison]
  if (TRAN_Channel_Nenergy * TRAN_Channel_Nkpoint <= 0) TRAN_Channel == 0;
                                                        ~~~~~~~~~~~~~^~~~
TRAN_Main_Analysis_NC.c:1008:70: note: use '=' to turn this equality comparison into an assignment
  if (TRAN_Channel_Nenergy * TRAN_Channel_Nkpoint <= 0) TRAN_Channel == 0;
                                                                     ^~
                                                                     =
TRAN_Main_Analysis_NC.c:3383:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if (fp = input_find("<NEGF.Channel.kpoint")) {
        ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
TRAN_Main_Analysis_NC.c:3383:12: note: place parentheses around the assignment to silence this warning
    if (fp = input_find("<NEGF.Channel.kpoint")) {
           ^
        (                                      )
TRAN_Main_Analysis_NC.c:3383:12: note: use '==' to turn this assignment into an equality comparison
    if (fp = input_find("<NEGF.Channel.kpoint")) {
           ^
           ==
TRAN_Main_Analysis_NC.c:3429:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]
    if (fp = input_find("<NEGF.Channel.Energy")){
        ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
TRAN_Main_Analysis_NC.c:3429:12: note: place parentheses around the assignment to silence this warning
    if (fp = input_find("<NEGF.Channel.Energy")){
           ^
        (                                      )
TRAN_Main_Analysis_NC.c:3429:12: note: use '==' to turn this assignment into an equality comparison
    if (fp = input_find("<NEGF.Channel.Energy")){
           ^
           ==
3 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c MTRAN_EigenChannel.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Channel_Functions.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Channel_Output.c
TRAN_Channel_Output.c:127:7: warning: implicitly declaring library function 'strcmp' with type 'int (const char *, const char *)' [-Wimplicit-function-declaration]
  if (strcmp(op, "r") == 0) { cmd = 1; }
      ^
TRAN_Channel_Output.c:127:7: note: include the header <string.h> or explicitly provide a declaration for 'strcmp'
TRAN_Channel_Output.c:400:1: warning: type specifier missing, defaults to 'int' [-Wimplicit-int]
TRAN_Output_ChannelCube(
^
TRAN_Channel_Output.c:516:9: warning: implicit declaration of function 'fsync' is invalid in C99 [-Wimplicit-function-declaration]
        fsync(fd);
        ^
TRAN_Channel_Output.c:547:9: warning: implicit declaration of function 'fsync' is invalid in C99 [-Wimplicit-function-declaration]
        fsync(fd);
        ^
TRAN_Channel_Output.c:566:1: warning: control reaches end of non-void function [-Wreturn-type]
} /* TRAN_Output_ChannelCube */
^
5 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_Calc_CurrentDensity.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c TRAN_CDen_Main.c
TRAN_CDen_Main.c:817:11: warning: implicit declaration of function 'fsync' is invalid in C99 [-Wimplicit-function-declaration]
          fsync(fd);
          ^
1 warning generated.
mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c elpa1.f90
mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c solve_evp_real.f90 
mpif90 -O -Wl,-rpath=/usr/local/lib/gcc8 -fopenmp -c solve_evp_complex.f90
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c NBO_Cluster.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -c NBO_Krylov.c
NBO_Krylov.c:471:13: warning: implicit declaration of function 'omp_get_thread_num' is invalid in C99 [-Wimplicit-function-declaration]
    OMPID = omp_get_thread_num();
            ^
NBO_Krylov.c:472:14: warning: implicit declaration of function 'omp_get_num_threads' is invalid in C99 [-Wimplicit-function-declaration]
    Nthrds = omp_get_num_threads();
             ^
NBO_Krylov.c:473:14: warning: implicit declaration of function 'omp_get_num_procs' is invalid in C99 [-Wimplicit-function-declaration]
    Nprocs = omp_get_num_procs();
             ^
3 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx.o exx.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_index.o exx_index.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_vector.o exx_vector.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_log.o exx_log.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_step1.o exx_step1.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_step2.o exx_step2.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_file_overlap.o exx_file_overlap.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_file_eri.o exx_file_eri.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_interface_openmx.o exx_interface_openmx.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_debug.o exx_debug.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_xc.o exx_xc.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o exx_rhox.o exx_rhox.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/eri.o liberi-091216/source/eri.c
liberi-091216/source/eri.c:133:43: warning: passing 'double *[3]' to parameter of type 'const double **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers]
    ERI_LL_Overlap_d(solver, p, dp, alp1, dalp1, alp2, dalp2, cx);
                                          ^~~~~
./liberi-091216/source/eri.h:532:17: note: passing argument to parameter 'da1' here
  const double *da1[3],
                ^
liberi-091216/source/eri.c:133:56: warning: passing 'double *[3]' to parameter of type 'const double **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers]
    ERI_LL_Overlap_d(solver, p, dp, alp1, dalp1, alp2, dalp2, cx);
                                                       ^~~~~
./liberi-091216/source/eri.h:534:17: note: passing argument to parameter 'da2' here
  const double *da2[3],
                ^
liberi-091216/source/eri.c:228:35: warning: incompatible pointer types passing 'double *' to parameter of type 'double (*)[3][2]' [-Wincompatible-pointer-types]
    ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG,
                                  ^~~
./liberi-091216/source/eri.h:574:17: note: passing argument to parameter 'dI4' here
  double        dI4[4][3][2],
                ^
liberi-091216/source/eri.c:228:50: warning: passing 'double *[3]' to parameter of type 'const double **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers]
    ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG,
                                                 ^~~~
./liberi-091216/source/eri.h:577:17: note: passing argument to parameter 'dF1' here
  const double *dF1[3],    /* (IN) Overlap matrix */
                ^
liberi-091216/source/eri.c:228:56: warning: passing 'double *[3]' to parameter of type 'const double **' discards qualifiers in nested pointer types [-Wincompatible-pointer-types-discards-qualifiers]
    ERI_Integral_GL_d(solver, I4, dI4, glF, glG, dglF, dglG,
                                                       ^~~~
./liberi-091216/source/eri.h:578:17: note: passing argument to parameter 'dF2' here
  const double *dF2[3],     /* (IN) */
                ^
5 warnings generated.
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/eri_ll.o liberi-091216/source/eri_ll.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/eri_sf.o liberi-091216/source/eri_sf.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/eri_interpolate.o liberi-091216/source/eri_interpolate.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/eri_gtbl.o liberi-091216/source/eri_gtbl.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/sbt/eri_sbt.o liberi-091216/source/sbt/eri_sbt.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/sbt/log/eri_fsbt.o liberi-091216/source/sbt/log/eri_fsbt.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/sbt/log/eri_logfsbt.o liberi-091216/source/sbt/log/eri_logfsbt.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include  -c -o liberi-091216/source/sbt/linear/eri_linfsbt.o liberi-091216/source/sbt/linear/eri_linfsbt.c
mpicc -O2 -pipe  -Dkcomp -msse -msse2 -mfpmath=sse -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -fopenmp -I./liberi-091216/source openmx.o openmx_common.o Input_std.o Inputtools.o init.o LU_inverse.o ReLU_inverse.o truncation.o readfile.o FT_PAO.o FT_NLP.o FT_ProExpn_VNA.o FT_VNA.o FT_ProductPAO.o Hamiltonian_Cluster.o Hamiltonian_Cluster_Hs.o Overlap_Cluster.o Hamiltonian_Band.o Overlap_Band.o Hamiltonian_Cluster_NC.o Hamiltonian_Band_NC.o Hamiltonian_Cluster_SO.o Get_OneD_HS_Col.o SetPara_DFT.o XC_Ceperly_Alder.o XC_CA_LSDA.o XC_PW92C.o XC_PBE.o XC_EX.o DFT.o Mixing_DM.o Mixing_H.o Force.o Stress.o Poisson.o Poisson_ESM.o Cluster_DFT.o Cluster_DFT_ScaLAPACK.o Cluster_DFT_Dosout.o Cluster_DFT_ON2.o Band_DFT_Col.o Band_DFT_Col_ScaLAPACK.o Band_DFT_NonCol.o Band_DFT_kpath.o Band_DFT_MO.o Unfolding_Bands.o Band_DFT_Dosout.o Set_Density_Grid.o Set_Orbitals_Grid.o Set_Aden_Grid.o Gauss_Legendre.o zero_cfrac.o xyz2spherical.o AngularF.o RadialF.o Dr_RadialF.o
  PhiF.o  VNAF.o Dr_VNAF.o VH_AtomF.o Dr_VH_AtomF.o RF_BesselF.o QuickSort.o Nonlocal_RadialF.o KumoF.o Dr_KumoF.o Mulliken_Charge.o Occupation_Number_LDA_U.o Eff_Hub_Pot.o EulerAngle_Spin.o Smoothing_Func.o Orbital_Moment.o Pot_NeutralAtom.o Simple_Mixing_DM.o DIIS_Mixing_DM.o ADIIS_Mixing_DM.o GR_Pulay_DM.o Kerker_Mixing_Rhok.o DIIS_Mixing_Rhok.o Total_Energy.o Contract_Hamiltonian.o Contract_iHNL.o Cont_Matrix0.o Cont_Matrix1.o Cont_Matrix2.o Cont_Matrix3.o Cont_Matrix4.o Opt_Contraction.o Initial_CntCoes.o Initial_CntCoes2.o Set_XC_Grid.o Get_Orbitals.o Get_dOrbitals.o Get_Cnt_Orbitals.o Get_Cnt_dOrbitals.o Gaunt.o Find_CGrids.o MD_pac.o RestartFileDFT.o Output_CompTime.o Merge_LogFile.o Make_FracCoord.o Make_InputFile_with_FinalCoord.o Output_Energy_Decomposition.o Divide_Conquer.o Krylov.o EC.o Divide_Conquer_Dosout.o Eigen_lapack.o Eigen_lapack2.o Eigen_lapack3.o EigenBand_lapack.o Eigen_PReHH.o BroadCast_ReMatrix.o Eigen_PHH.o BroadCast_ComplexMatrix.o lapack_dstedc1.o lapack
 _dstedc2.o lapack_dstedc3.o lapack_dstegr1.o!
  lapack_dstegr2.o lapack_dstegr3.o lapack_dstevx1.o lapack_dstevx2.o lapack_dstevx3.o lapack_dstevx4.o lapack_dstevx5.o lapack_dsteqr1.o Nonlocal_Basis.o Set_OLP_Kin.o Set_Nonlocal.o Set_ProExpn_VNA.o Set_Hamiltonian.o Set_Vpot.o Voronoi_Charge.o Voronoi_Orbital_Moment.o Fuzzy_Weight.o dampingF.o deri_dampingF.o Spherical_Bessel.o iterout.o iterout_md.o Allocate_Arrays.o Free_Arrays.o Init_List_YOUSO.o outputfile1.o malloc_multidimarray.o PrintMemory.o PrintMemory_Fix.o dtime.o OutData.o OutData_Binary.o init_alloc_first.o File_CntCoes.o SCF2File.o mimic_sse.o Make_Comm_Worlds.o Set_Allocate_Atom2CPU.o Cutoff.o Generating_MP_Special_Kpt.o Maketest.o Runtest.o Memory_Leak_test.o Force_test.o Stress_test.o Show_DFT_DATA.o Generate_Wannier.o TRAN_Allocate.o TRAN_DFT.o TRAN_DFT_Dosout.o TRAN_Apply_Bias2e.o TRAN_Deallocate_Electrode_Grid.o TRAN_Deallocate_RestartFile.o TRAN_RestartFile.o TRAN_Calc_CentGreen.o TRAN_Input_std.o TRAN_Set_CentOverlap.o TRAN_Calc_CentGreenLesser.o TRAN_Input_
 std_Atoms.o TRAN_Set_Electrode_Grid.o TRAN_Calc_GridBound.o TRAN_Set_IntegPath.o TRAN_Output_HKS.o TRAN_Set_MP.o TRAN_Calc_SelfEnergy.o TRAN_Output_Trans_HS.o TRAN_Calc_Hopping_G.o TRAN_Calc_SurfGreen.o TRAN_Set_SurfOverlap.o TRAN_Add_Density_Lead.o TRAN_Add_ADensity_Lead.o TRAN_Set_Value.o TRAN_Poisson.o TRAN_adjust_Ngrid.o TRAN_Print.o TRAN_Print_Grid.o Lapack_LU_inverse.o TRAN_Distribute_Node.o TRAN_Output_HKS_Write_Grid.o TRAN_Credit.o TRAN_Check_Region_Lead.o TRAN_Check_Region.o TRAN_Check_Input.o DFTDvdW_init.o DFTD3vdW_init.o neb.o neb_run.o neb_check.o cellopt.o TRAN_Allocate_NC.o TRAN_DFT_NC.o TRAN_Set_CentOverlap_NC.o TRAN_Set_SurfOverlap_NC.o TRAN_Calc_OneTransmission.o TRAN_Main_Analysis.o TRAN_Main_Analysis_NC.o MTRAN_EigenChannel.o TRAN_Channel_Functions.o TRAN_Channel_Output.o TRAN_Calc_CurrentDensity.o TRAN_CDen_Main.o elpa1.o solve_evp_real.o solve_evp_complex.o NBO_Cluster.o NBO_Krylov.o  exx.o exx_index.o exx_vector.o exx_log.o exx_step1.o exx_step2.o exx_file_ove
 rlap.o exx_file_eri.o exx_interface_openmx.o!
  exx_debu!
 g.o exx_xc.o exx_rhox.o ./liberi-091216/source/eri.o ./liberi-091216/source/eri_ll.o ./liberi-091216/source/eri_sf.o ./liberi-091216/source/eri_interpolate.o ./liberi-091216/source/eri_gtbl.o ./liberi-091216/source/sbt/eri_sbt.o ./liberi-091216/source/sbt/log/eri_fsbt.o ./liberi-091216/source/sbt/log/eri_logfsbt.o ./liberi-091216/source/sbt/linear/eri_linfsbt.o   /usr/local/lib/gcc8/libgcc_s.so /usr/local/lib/libmpifort.so -Wl,-rpath=/usr/local/lib/gcc8  -L/usr/local/lib/gcc8 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib  -lpthread -llapack -lblas -lgfortran -lfftw3 -liomp5 -lm -o openmx
/usr/local/bin/ld: cannot find -liomp5
cc: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[1]: *** [makefile:253: openmx] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/openmx/work/openmx3.8/source'
*** Error code 1

Stop.
make: stopped in /usr/ports/science/openmx



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