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Date:      Tue, 24 Jan 2017 09:10:39 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 110armv6-quarterly][math/libRmath] Failed for libRmath-3.3.2_1 in configure
Message-ID:  <201701240910.v0O9AdRA068865@beefy15.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     jrm@FreeBSD.org
Last committer: antoine@FreeBSD.org
Ident:          $FreeBSD: branches/2017Q1/math/libRmath/Makefile 430833 2017-01-07 21:21:25Z antoine $
Log URL:        http://beefy15.nyi.freebsd.org/data/110armv6-quarterly/432290/logs/libRmath-3.3.2_1.log
Build URL:      http://beefy15.nyi.freebsd.org/build.html?mastername=110armv6-quarterly&build=432290
Log:

====>> Building math/libRmath
build started at Tue Jan 24 09:09:18 UTC 2017
port directory: /usr/ports/math/libRmath
building for: FreeBSD 110armv6-quarterly-job-02 11.0-RELEASE-p5 FreeBSD 11.0-RELEASE-p5 r309692 arm
maintained by: jrm@FreeBSD.org
Makefile ident:      $FreeBSD: branches/2017Q1/math/libRmath/Makefile 430833 2017-01-07 21:21:25Z antoine $
Poudriere version: 3.1.14
Host OSVERSION: 1200018
Jail OSVERSION: 1100122
Job Id: 02

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-RELEASE-p5 r309692
UNAME_r=11.0-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/110armv6-quarterly/ref
QEMU_EMULATING=1
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=libRmath-3.3.2_1
OSREL=11.0
_OSRELEASE=11.0-RELEASE-p5
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=28
PWD=/usr/local/poudriere/data/.m/110armv6-quarterly/ref/.p/pool
MASTERNAME=110armv6-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.14
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100122
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--
--disable-nls --with-ICU=no --with-cairo=no  --with-jpeglib=no --with-libpng=no --with-libtiff=no  --with-readline=no --with-tcltk=no --with-x=no  --without-libintl-prefix --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
ac_cv_header_iconv_h=no r_cv_header_zlib_h=yes F77="gfortran49" FC="gfortran49" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc49" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc49" XDG_DATA_HOME=/wrkdirs/usr/ports/math/libRmath/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/libRmath/work  HOME=/wrkdirs/usr/ports/math/libRmath/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran49" FC="gfortran49" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc49" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc49" XDG_DATA_HOME=/wrkdirs/usr/ports/math/libRmath/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/libRmath/work  HOME=/wrkdirs/usr/ports/math/libRmath/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe  -isystem /usr/local/include -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include"  LDFLAGS=" -Wl,-rpath=/usr/local/lib
 /gcc49  -L/usr/local/lib/gcc49 -B/usr/local/bin" LIBS="-L/usr/local/lib"  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
RMATH_SOVERSION="1"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/libRmath"
EXAMPLESDIR="share/examples/libRmath"
DATADIR="share/libRmath"
WWWDIR="www/libRmath"
ETCDIR="etc/libRmath"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/libRmath
DOCSDIR=/usr/local/share/doc/libRmath
EXAMPLESDIR=/usr/local/share/examples/libRmath
WWWDIR=/usr/local/www/libRmath
ETCDIR=/usr/local/etc/libRmath
--End SUB_LIST--

---Begin make.conf---
.sinclude "/etc/make.nxb.conf"
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
MACHINE=arm
MACHINE_ARCH=armv6
ARCH=${MACHINE_ARCH}
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
---Begin make.nxb.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
---End make.nxb.conf---
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   libRmath-3.3.2_1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.9.4_1.txz
pkg-static: Warning: Major OS version upgrade detected.  Running "pkg-static install -f pkg" recommended
[110armv6-quarterly-job-02] Installing pkg-1.9.4_1...
[110armv6-quarterly-job-02] Extracting pkg-1.9.4_1: .......... done
===>   libRmath-3.3.2_1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of libRmath-3.3.2_1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by libRmath-3.3.2_1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by libRmath-3.3.2_1 for building
=> SHA256 Checksum OK for R-3.3.2.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by libRmath-3.3.2_1 for building
===>  Extracting for libRmath-3.3.2_1
=> SHA256 Checksum OK for R-3.3.2.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for libRmath-3.3.2_1
===========================================================================
=======================<phase: build-depends  >============================
===>   libRmath-3.3.2_1 depends on executable: gfortran49 - not found
===>   Installing existing package /packages/All/gcc-4.9.4.txz
pkg-static: Warning: Major OS version upgrade detected.  Running "pkg-static install -f pkg" recommended
[110armv6-quarterly-job-02] Installing gcc-4.9.4...
[110armv6-quarterly-job-02] `-- Installing indexinfo-0.2.6...
[110armv6-quarterly-job-02] `-- Extracting indexinfo-0.2.6: .... done
[110armv6-quarterly-job-02] `-- Installing mpc-1.0.3...
[110armv6-quarterly-job-02] |   `-- Installing gmp-5.1.3_3...
[110armv6-quarterly-job-02] |   `-- Extracting gmp-5.1.3_3: .......... done
[110armv6-quarterly-job-02] |   `-- Installing mpfr-3.1.5...
[110armv6-quarterly-job-02] |   `-- Extracting mpfr-3.1.5: .......... done
[110armv6-quarterly-job-02] `-- Extracting mpc-1.0.3: ...... done
[110armv6-quarterly-job-02] `-- Installing binutils-2.27_5,1...
[110armv6-quarterly-job-02] |   `-- Installing gettext-runtime-0.19.8.1_1...
[110armv6-quarterly-job-02] |   `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[110armv6-quarterly-job-02] `-- Extracting binutils-2.27_5,1: .......... done
[110armv6-quarterly-job-02] Extracting gcc-4.9.4: .......... done
Message from gcc-4.9.4:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc49

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===>   libRmath-3.3.2_1 depends on executable: gfortran49 - found
===>   Returning to build of libRmath-3.3.2_1
===>   libRmath-3.3.2_1 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   libRmath-3.3.2_1 depends on shared library: libcurl.so - not found
<snip>
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defining F77 to be gfortran49
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checking whether we are using the GNU Objective C compiler... yes
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no working ObjC++ compiler found
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checking if the linker (/usr/local/bin/ld) is GNU ld... yes
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checking the name lister (/usr/local/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... (cached) 262144
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checking how to convert armv6-portbld-freebsd11.0 file names to toolchain format... func_convert_file_noop
checking for /usr/local/bin/ld option to reload object files... -r
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checking how to recognize dependent libraries... pass_all
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checking command to parse /usr/local/bin/nm output from /nxb-bin/usr/bin/cc object... ok
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checking how to truncate binary pipes... /bin/dd bs=4096 count=1
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checking if mt is a manifest tool... no
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checking if /nxb-bin/usr/bin/cc PIC flag -fPIC -DPIC works... yes
checking if /nxb-bin/usr/bin/cc static flag -static works... yes
checking if /nxb-bin/usr/bin/cc supports -c -o file.o... yes
checking if /nxb-bin/usr/bin/cc supports -c -o file.o... (cached) yes
checking whether the /nxb-bin/usr/bin/cc linker (/usr/local/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd11.0 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... no
checking if libtool supports shared libraries... yes
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checking whether to build static libraries... no
checking how to run the C++ preprocessor... /nxb-bin/usr/bin/c++ -E
checking for ld used by /nxb-bin/usr/bin/c++... /usr/local/bin/ld
checking if the linker (/usr/local/bin/ld) is GNU ld... yes
checking whether the /nxb-bin/usr/bin/c++ linker (/usr/local/bin/ld) supports shared libraries... yes
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checking if /nxb-bin/usr/bin/c++ supports -c -o file.o... yes
checking if /nxb-bin/usr/bin/c++ supports -c -o file.o... (cached) yes
checking whether the /nxb-bin/usr/bin/c++ linker (/usr/local/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd11.0 ld.so
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for gfortran49 option to produce PIC... -fPIC
checking if gfortran49 PIC flag -fPIC works... yes
checking if gfortran49 static flag -static works... yes
checking if gfortran49 supports -c -o file.o... yes
checking if gfortran49 supports -c -o file.o... (cached) yes
checking whether the gfortran49 linker (/usr/local/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... freebsd11.0 ld.so
checking how to hardcode library paths into programs... immediate
checking for cos in -lm... yes
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checking size of int... 4
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checking size of long double... 8
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checking whether /nxb-bin/usr/bin/cc supports -c -o FILE.lo... yes
checking for /nxb-bin/usr/bin/cc option to support OpenMP... unsupported
checking how to get verbose linking output from gfortran49... -v
checking for Fortran 77 libraries of gfortran49...  -L/usr/local/lib/gcc49 -L/usr/local/bin -L/usr/local/lib/gcc49/gcc/armv6-portbld-freebsd11.0/4.9.4 -L/usr/local/lib/gcc49/gcc/armv6-portbld-freebsd11.0/4.9.4/../../../../../armv6-portbld-freebsd11.0/lib -L/usr/local/lib/gcc49/gcc/armv6-portbld-freebsd11.0/4.9.4/../../.. -lgfortran -lm
checking how to get verbose linking output from /nxb-bin/usr/bin/cc... -v
checking for C libraries of /nxb-bin/usr/bin/cc...  -L/usr/local/lib/gcc49 -L/usr/lib -lgcc_s
checking for dummy main to link with Fortran 77 libraries... unknown
configure: error: in `/wrkdirs/usr/ports/math/libRmath/work/R-3.3.2':
configure: error: linking to Fortran libraries from C fails
See `config.log' for more details
===>  Script "configure" failed unexpectedly.
Please report the problem to jrm@FreeBSD.org [maintainer] and attach the
"/wrkdirs/usr/ports/math/libRmath/work/R-3.3.2/config.log" including the
output of the failure of your make command. Also, it might be a good idea to
provide an overview of all packages installed on your system (e.g. a
/usr/local/sbin/pkg-static info -g -Ea).
*** Error code 1

Stop.
make: stopped in /usr/ports/math/libRmath



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