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Date:      Thu, 12 Mar 2020 14:09:33 -0500
From:      Valeri Galtsev <galtsev@kicp.uchicago.edu>
To:        freebsd-questions@freebsd.org
Subject:   Re: "directory not empty", "no such file or directory" errors on upgrade
Message-ID:  <94e006d9-bf6e-52e2-c667-763385cdd98e@kicp.uchicago.edu>
In-Reply-To: <c6e1a79d-2ce9-52a3-9039-d5f3b727cc49@dreamchaser.org>
References:  <c6e1a79d-2ce9-52a3-9039-d5f3b727cc49@dreamchaser.org>

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On 2020-03-12 14:03, Gary Aitken wrote:
> Upgrading from 11.2-RELEASE to 11.3-RELEASE
> 
> The final invoke of freebsd-update install completed with the following
> messages:
> 
> ///usr/src/sys/pc98/include/acpica_machdep.h  no such file or directory
> rmdir: ///usr/src/contrib/ofed/usr.lib        directory not empty
> rmdir: ///usr/src/contrib/ofed/usr.bin        directory not empty
> rmdir: 
> ///usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/ThreadSanitizer   
> directory not empty
> rmdir: 
> ///usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/AddressSanitizer  
> directory not empty

I would unmount filesystem and run fsck on it first.

Valeri

> 
> The upgraded system has no
>    /usr/src/sys/pc98/  directory
> 
> The files in
>    /usr/src/contrib/ofed/usr.lib
>    /usr/src/contrib/ofed/usr.bin
>    
> /usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/ThreadSanitizer 
> 
>    
> /usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/AddressSanitizer 
> 
> 
> appear to be old versions left over from the original 11.2 install
> 
> Hints on the proper way to fix this?
> (The system appears to be running ok so far, I presume because these are
> source files and not binaries)
> 
> Thanks,
> 
> Gary
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-- 
++++++++++++++++++++++++++++++++++++++++
Valeri Galtsev
Sr System Administrator
Department of Astronomy and Astrophysics
Kavli Institute for Cosmological Physics
University of Chicago
Phone: 773-702-4247
++++++++++++++++++++++++++++++++++++++++



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