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Date:      Mon, 8 Aug 2016 11:21:04 +0000 (UTC)
From:      Wen Heping <wen@FreeBSD.org>
To:        ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org
Subject:   svn commit: r419818 - head/biology/pycogent
Message-ID:  <201608081121.u78BL4m5035782@repo.freebsd.org>

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Author: wen
Date: Mon Aug  8 11:21:04 2016
New Revision: 419818
URL: https://svnweb.freebsd.org/changeset/ports/419818

Log:
  - Update to 1.9 [1]
  - Moved to github [1]
  - Depend on newer sqlalchemy10 [1]
  - Update pkg-descr and WWW [1]
  - Limit python to -2.7 [2]
  - Reset maintainer to python@ for better maintain
  
  PR:		211621
  Submitted by:	pi@ [1], koobs@ [2]

Modified:
  head/biology/pycogent/Makefile
  head/biology/pycogent/distinfo

Modified: head/biology/pycogent/Makefile
==============================================================================
--- head/biology/pycogent/Makefile	Mon Aug  8 11:18:50 2016	(r419817)
+++ head/biology/pycogent/Makefile	Mon Aug  8 11:21:04 2016	(r419818)
@@ -2,14 +2,10 @@
 # $FreeBSD$
 
 PORTNAME=	pycogent
-PORTVERSION=	1.5.3
-PORTREVISION=	3
+PORTVERSION=	1.9
 CATEGORIES=	biology python
-MASTER_SITES=	SF/${PORTNAME}/PyCogent/${PORTVERSION}
-DISTNAME=	PyCogent-${PORTVERSION}
-EXTRACT_SUFX=	.tgz
 
-MAINTAINER=	wen@FreeBSD.org
+MAINTAINER=	python@FreeBSD.org
 COMMENT=	Toolkit for statistical analysis of biological sequences
 
 LICENSE=	GPLv2
@@ -17,10 +13,11 @@ LICENSE=	GPLv2
 BUILD_DEPENDS=	${PYNUMPY} \
 		${LOCALBASE}/bin/cython:lang/cython \
 		${LOCALBASE}/bin/sphinx-build:textproc/py-sphinx \
-		${PYTHON_PKGNAMEPREFIX}sqlalchemy06>=0.5:databases/py-sqlalchemy06
+		${PYTHON_PKGNAMEPREFIX}sqlalchemy10>=1.0.13:databases/py-sqlalchemy10
 RUN_DEPENDS:=	${BUILD_DEPENDS}
 
-USES=		python
+USES=		python:-2.7
+USE_GITHUB=	yes
 USE_PYTHON=	distutils autoplist
 
 .include <bsd.port.mk>

Modified: head/biology/pycogent/distinfo
==============================================================================
--- head/biology/pycogent/distinfo	Mon Aug  8 11:18:50 2016	(r419817)
+++ head/biology/pycogent/distinfo	Mon Aug  8 11:21:04 2016	(r419818)
@@ -1,2 +1,3 @@
-SHA256 (PyCogent-1.5.3.tgz) = ad883cf4f8bbedd797b934a6ba75a20df2313736e84bff3d5a0e54ac41ea425c
-SIZE (PyCogent-1.5.3.tgz) = 3360039
+TIMESTAMP = 1470681973
+SHA256 (pycogent-pycogent-1.9_GH0.tar.gz) = c9f56d21d764aa62e3e8a9df5a300eb7fb59e502572bec41894d21df19aeceb5
+SIZE (pycogent-pycogent-1.9_GH0.tar.gz) = 3744597



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