From owner-freebsd-ports-bugs@FreeBSD.ORG Tue Mar 27 06:50:12 2012 Return-Path: Delivered-To: freebsd-ports-bugs@hub.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [69.147.83.52]) by hub.freebsd.org (Postfix) with ESMTP id 509BA106566C for ; Tue, 27 Mar 2012 06:50:12 +0000 (UTC) (envelope-from gnats@FreeBSD.org) Received: from freefall.freebsd.org (freefall.freebsd.org [IPv6:2001:4f8:fff6::28]) by mx1.freebsd.org (Postfix) with ESMTP id 2902F8FC14 for ; Tue, 27 Mar 2012 06:50:12 +0000 (UTC) Received: from freefall.freebsd.org (localhost [127.0.0.1]) by freefall.freebsd.org (8.14.5/8.14.5) with ESMTP id q2R6oCQh025362 for ; Tue, 27 Mar 2012 06:50:12 GMT (envelope-from gnats@freefall.freebsd.org) Received: (from gnats@localhost) by freefall.freebsd.org (8.14.5/8.14.5/Submit) id q2R6oBeR025361; Tue, 27 Mar 2012 06:50:11 GMT (envelope-from gnats) Resent-Date: Tue, 27 Mar 2012 06:50:11 GMT Resent-Message-Id: <201203270650.q2R6oBeR025361@freefall.freebsd.org> Resent-From: FreeBSD-gnats-submit@FreeBSD.org (GNATS Filer) Resent-To: freebsd-ports-bugs@FreeBSD.org Resent-Reply-To: FreeBSD-gnats-submit@FreeBSD.org, David Naylor Received: from mx1.freebsd.org (mx1.freebsd.org [69.147.83.52]) by hub.freebsd.org (Postfix) with ESMTP id B6C0F106564A for ; Tue, 27 Mar 2012 06:47:45 +0000 (UTC) (envelope-from nobody@FreeBSD.org) Received: from red.freebsd.org (red.freebsd.org [IPv6:2001:4f8:fff6::22]) by mx1.freebsd.org (Postfix) with ESMTP id A1C9B8FC12 for ; Tue, 27 Mar 2012 06:47:45 +0000 (UTC) Received: from red.freebsd.org (localhost [127.0.0.1]) by red.freebsd.org (8.14.4/8.14.4) with ESMTP id q2R6ljTS011163 for ; Tue, 27 Mar 2012 06:47:45 GMT (envelope-from nobody@red.freebsd.org) Received: (from nobody@localhost) by red.freebsd.org (8.14.4/8.14.4/Submit) id q2R6ljgH011162; Tue, 27 Mar 2012 06:47:45 GMT (envelope-from nobody) Message-Id: <201203270647.q2R6ljgH011162@red.freebsd.org> Date: Tue, 27 Mar 2012 06:47:45 GMT From: David Naylor To: freebsd-gnats-submit@FreeBSD.org X-Send-Pr-Version: www-3.1 Cc: Subject: ports/166437: [patch] update math/R-cran-car from 2.0-11 to 2.0-12 X-BeenThere: freebsd-ports-bugs@freebsd.org X-Mailman-Version: 2.1.5 Precedence: list List-Id: Ports bug reports List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Tue, 27 Mar 2012 06:50:12 -0000 >Number: 166437 >Category: ports >Synopsis: [patch] update math/R-cran-car from 2.0-11 to 2.0-12 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: maintainer-update >Submitter-Id: current-users >Arrival-Date: Tue Mar 27 06:50:11 UTC 2012 >Closed-Date: >Last-Modified: >Originator: David Naylor >Release: >Organization: Private >Environment: >Description: Changes to Version 2.0-12 o modified compareCoefs to support any S4 object with that responds to the 'coefs' and 'vcov' methods o fixed bug in deltaMethod.surveg and deltaMethod.coxph to all use of the 'parameterNames' argument. o compareCoefs: added an argument 'print' to suppress printing output. Added support for 'lme' objects. o fixed xlab, ylab arguments and added dfn argument to confidenceEllipse() (suggestions of Michael Friendly). o moved survival from Depends to Suggests (request of Michael Friendly); added survey to Suggests. o added Anova.svyglm and linearHypothesis.svyglm. o fixed bug in linearHypothesis() that affected printing of some hypotheses (reported by Arne Henningsen). o fixed bug in Anova() for GLMs when F-test used with na.exclude. o package now byte-compiled. >How-To-Repeat: >Fix: Patch attached with submission follows: diff -urN /usr/ports/math/R-cran-car/Makefile R-cran-car/Makefile --- /usr/ports/math/R-cran-car/Makefile 2012-03-04 03:20:44.000000000 +0200 +++ R-cran-car/Makefile 2012-03-27 08:39:26.000000000 +0200 @@ -6,8 +6,7 @@ # PORTNAME= car -DISTVERSION= 2.0-11 -PORTREVISION= 3 +DISTVERSION= 2.0-12 CATEGORIES= math DISTNAME= ${PORTNAME}_${DISTVERSION} diff -urN /usr/ports/math/R-cran-car/distinfo R-cran-car/distinfo --- /usr/ports/math/R-cran-car/distinfo 2011-10-30 03:11:25.000000000 +0200 +++ R-cran-car/distinfo 2012-03-27 08:40:21.000000000 +0200 @@ -1,2 +1,2 @@ -SHA256 (car_2.0-11.tar.gz) = 27def3bea41854d8aa272102b6e8987156a02df98b49b3ea44408b83269fd8a2 -SIZE (car_2.0-11.tar.gz) = 318150 +SHA256 (car_2.0-12.tar.gz) = b8f1f1dda6a66d6882dff06cece1b71089c922684b3103d89cd3ae44b0c595a5 +SIZE (car_2.0-12.tar.gz) = 319291 >Release-Note: >Audit-Trail: >Unformatted: