Date: Tue, 6 Aug 2019 19:00:15 GMT From: pkg-fallout@FreeBSD.org To: yuri@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 112amd64-default][misc/adios2] Failed for adios2-2.4.0 in build Message-ID: <201908061900.x76J0FYL040583@beefy9.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/misc/adios2/Makefile 507507 2019-07-28 10:26:50Z yuri $ Log URL: http://beefy9.nyi.freebsd.org/data/112amd64-default/508224/logs/adios2-2.4.0.log Build URL: http://beefy9.nyi.freebsd.org/build.html?mastername=112amd64-default&build=508224 Log: =>> Building misc/adios2 build started at Tue Aug 6 18:48:48 UTC 2019 port directory: /usr/ports/misc/adios2 package name: adios2-2.4.0 building for: FreeBSD 112amd64-default-job-03 11.2-RELEASE-p12 FreeBSD 11.2-RELEASE-p12 amd64 maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/misc/adios2/Makefile 507507 2019-07-28 10:26:50Z yuri $ Poudriere version: 3.2.8-5-gc81843e5 Host OSVERSION: 1300031 Jail OSVERSION: 1102000 Job Id: 03 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1102000 UNAME_v=FreeBSD 11.2-RELEASE-p12 UNAME_r=11.2-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-5-gc81843e5 MASTERMNT=/usr/local/poudriere/data/.m/112amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/112amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=112amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/112amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.6" XDG_DATA_HOME=/wrkdirs/usr/ports/misc/adios2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/adios2/work HOME=/wrkdirs/usr/ports/misc/adios2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/adios2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/misc/adios2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/misc/adios2/work HOME=/wrkdirs/usr/ports/misc/adios2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/misc/adios2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/misc/adios2/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.6m PYTHON_LIBDIR=lib/python3.6 PYTHON_PLATFORM=freebsd11 PYTHON_SITELIBDIR=lib/python3.6/site-packages PYTHON_SUFFIX=36 PYTHON_VER=3.6 PYTHON_VERSION=python3.6 PYTHON2="@comment " PYTHON3="" OSREL=11.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.28.2 PERL_VER=5.28 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.28 DOCSDIR="share/doc/adios2" EXAMPLESDIR="share/examples/adios2" DATADIR="share/adios2" WWWDIR="www/adios2" ETCDIR="etc/adios2" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/adios2 DOCSDIR=/usr/local/share/doc/adios2 EXAMPLESDIR=/usr/local/share/examples/adios2 WWWDIR=/usr/local/www/adios2 ETCDIR=/usr/local/etc/adios2 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd11.2 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd11.2 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: x86_64-unknown-freebsd11.2 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=11.2-RELEASE-p12 OSREL=11.2 OSVERSION=1102000 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License APACHE20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> adios2-2.4.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.11.1.txz [112amd64-default-job-03] Installing pkg-1.11.1... [112amd64-default-job-03] Extracting pkg-1.11.1: .......... done ===> adios2-2.4.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of adios2-2.4.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by adios2-2.4.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by adios2-2.4.0 for building => SHA256 Checksum OK for ornladios-ADIOS2-v2.4.0_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by adios2-2.4.0 for building ===> Extracting for adios2-2.4.0 => SHA256 Checksum OK for ornladios-ADIOS2-v2.4.0_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for adios2-2.4.0 ===> Applying FreeBSD patches for adios2-2.4.0 =========================================================================== =======================<phase: build-depends >============================ ===> adios2-2.4.0 depends on executable: bash - not found ===> Installing existing package /packages/All/bash-5.0.7.txz [112amd64-default-job-03] Installing bash-5.0.7... [112amd64-default-job-03] `-- Installing gettext-runtime-0.20.1... [112amd64-default-job-03] | `-- Installing indexinfo-0.3.1... [112amd64-default-job-03] | `-- Extracting indexinfo-0.3.1: .... done [112amd64-default-job-03] `-- Extracting gettext-runtime-0.20.1: .......... done [112amd64-default-job-03] Extracting bash-5.0.7: .......... done ===> adios2-2.4.0 depends on executable: bash - found ===> Returning to build of adios2-2.4.0 ===> adios2-2.4.0 depends on executable: bison - not found ===> Installing existing package /packages/All/bison-3.4.1,1.txz [112amd64-default-job-03] Installing bison-3.4.1,1... <snip> /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3855:32: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] id1.version, id1.salt, ntohs(id1.port), ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3856:9: warning: implicit declaration of function 'ntohl' is invalid in C99 [-Wimplicit-function-declaration] ntohl(id1.IP_addr), ntohs(id1.format_identifier)); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3863:36: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] id2->version, id2->unused, ntohs(id2->rep_len) << 2, ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3864:9: warning: implicit declaration of function 'ntohl' is invalid in C99 [-Wimplicit-function-declaration] ntohl(id2->hash1), ntohl(id2->hash2)); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:3934:9: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] tmp = ntohs(tmp); ^ /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_formats.c:4043:19: warning: implicit declaration of function 'ntohs' is invalid in C99 [-Wimplicit-function-declaration] *rep_length = ntohs(format->server_format_rep->format_rep_length); ^ 16 warnings generated. [51/284] /usr/bin/cc -DMPICH_SKIP_MPICXX -DOMPI_SKIP_MPICXX -Dffs_EXPORTS -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/cod -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/ffs -Ithirdparty/ffs/ffs -Ithirdparty/ffs/ffs/ffs -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/dill/dill -Ithirdparty/dill/dill -I/wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/atl/atl -Ithirdparty/atl/atl -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=gnu99 -MD -MT thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o -MF thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o.d -o thirdparty/ffs/ffs/CMakeFiles/ffs.dir/fm/fm_dump.c.o -c /wrkdirs/usr/ports/misc/adios2/work/ADIOS2-2.4.0/thirdparty/ffs/ffs/fm/fm_dump.c [52/284] 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-Wl,/usr/local/mpi/openmpi/lib -Wl,--enable-new-dtags -pthread /usr/local/mpi/openmpi/lib/libmpi.so -Wl,-rpath-link,/wrkdirs/usr/ports/misc/adios2/work/.build/lib && : //usr/local/lib/libfabric.so.1: undefined reference to `epoll_ctl' //usr/local/lib/libfabric.so.1: undefined reference to `epoll_wait' //usr/local/lib/libfabric.so.1: undefined reference to `epoll_create' c++: error: linker command failed with exit code 1 (use -v to see invocation) ninja: build stopped: subcommand failed. *** Error code 1 Stop. make: stopped in /usr/ports/misc/adios2
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