Skip site navigation (1)Skip section navigation (2)
Date:      Fri, 13 Mar 2020 07:04:24 -0600
From:      Gary Aitken <freebsd@dreamchaser.org>
To:        Polytropon <freebsd@edvax.de>
Cc:        FreeBSD Mailing List <freebsd-questions@freebsd.org>
Subject:   Re: "directory not empty", "no such file or directory" errors on upgrade
Message-ID:  <38fde868-7d2b-d396-449b-973ac9c39963@dreamchaser.org>
In-Reply-To: <20200312235749.5e10fb02.freebsd@edvax.de>
References:  <c6e1a79d-2ce9-52a3-9039-d5f3b727cc49@dreamchaser.org> <20200312235749.5e10fb02.freebsd@edvax.de>

Next in thread | Previous in thread | Raw E-Mail | Index | Archive | Help
On 3/12/20 4:57 PM, Polytropon wrote:
> On Thu, 12 Mar 2020 13:03:27 -0600, Gary Aitken wrote:
>> Upgrading from 11.2-RELEASE to 11.3-RELEASE
>>
>> The final invoke of freebsd-update install completed with the following
>> messages:
>>
>> ///usr/src/sys/pc98/include/acpica_machdep.h  no such file or directory
>> rmdir: ///usr/src/contrib/ofed/usr.lib        directory not empty
>> rmdir: ///usr/src/contrib/ofed/usr.bin        directory not empty
>> rmdir: ///usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/ThreadSanitizer   directory not empty
>> rmdir: ///usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/AddressSanitizer  directory not empty
>>
>> The upgraded system has no
>>     /usr/src/sys/pc98/  directory
>>
>> The files in
>>     /usr/src/contrib/ofed/usr.lib
>>     /usr/src/contrib/ofed/usr.bin
>>     /usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/ThreadSanitizer
>>     /usr/src/contrib/llvm/tools/lldb/source/Plugins/InstrumentationRuntime/AddressSanitizer
>>
>> appear to be old versions left over from the original 11.2 install
>>
>> Hints on the proper way to fix this?
> 
> When I read such messages, the first thing that comes to mind
> is filesystem inconsistency. Reboot into single-user mode and
> run a forced (!) fsck on all file systems, maybe repeat it if
> needed.

fsck reported all clean.

> You probably don't have
> 
> 	background_fsck="NO"
> 
> in your /etc/rc.conf which in my opinion should be the default
> setting (instead of YES). See "man 8 fsck" for further options
> that might be needed.

Thanks for the reminder; I used to have it set but on this rebuilt-
after-a-crash system lost it.

> Things like "directory not empty" can also be due to files that
> haven't been removed. This is possible if the schg (immutable)
> flag has been set for a file; use "chflags noschg <file>"; see
> "man 1 chflags" for details.
> 
> First step: Always rule out the obvious. ;-)

The remaining question is:
Are those directories supposed to be repopulated
with more recent versions?  Or should they simply be removed?
If they need to be repopulated, how does one repopulate them?

Thanks,
Gary



Want to link to this message? Use this URL: <http://docs.FreeBSD.org/cgi/mid.cgi?38fde868-7d2b-d396-449b-973ac9c39963>