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Date:      Mon, 06 Oct 2014 18:52:18 +0000
From:      bugzilla-noreply@freebsd.org
To:        freebsd-ports-bugs@FreeBSD.org
Subject:   [Bug 190854] New port: biology/ncbi-blast
Message-ID:  <bug-190854-13-bI2qr20jsh@https.bugs.freebsd.org/bugzilla/>
In-Reply-To: <bug-190854-13@https.bugs.freebsd.org/bugzilla/>
References:  <bug-190854-13@https.bugs.freebsd.org/bugzilla/>

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D190854

--- Comment #20 from John Marino <marino@FreeBSD.org> ---
(In reply to John Marino from comment #18)
> I'll bring this back too although I wonder how FreeBSD 8 will look it.
>=20
> X	${REINPLACE_CMD} \
> X		-e "s|-D_THREAD_SAFE|-D_THREAD_SAFE -D__RUNETYPE_INTERNAL|g" \
> X		${WRKSRC}/src/build-system/configure

While ncbi-blast is building (takes a while, doesn't it?), I am wondering if
this is actually legit.  The message in the comment is typically seen when
libraries from old system are mixed with new.  Since you don't use poudrier=
e,
I'm wondering if you have a mixed jail.

If this builds successfully, I'll have to rebuild it without this line to s=
ee
if it's really needed.  I suspect it's not and your system was/is dirty.

--=20
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