Date: Mon, 27 Aug 2018 06:15:57 +0000 (UTC) From: Yuri Victorovich <yuri@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r478179 - in head/science: . datawarrior Message-ID: <201808270615.w7R6FvVx070619@repo.freebsd.org>
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Author: yuri Date: Mon Aug 27 06:15:56 2018 New Revision: 478179 URL: https://svnweb.freebsd.org/changeset/ports/478179 Log: New port: science/datawarrior: Chemistry-aware multi-purpose data visualization and analysis program Added: head/science/datawarrior/ head/science/datawarrior/Makefile (contents, props changed) head/science/datawarrior/distinfo (contents, props changed) head/science/datawarrior/pkg-descr (contents, props changed) Modified: head/science/Makefile Modified: head/science/Makefile ============================================================================== --- head/science/Makefile Mon Aug 27 06:14:21 2018 (r478178) +++ head/science/Makefile Mon Aug 27 06:15:56 2018 (r478179) @@ -49,6 +49,7 @@ SUBDIR += colt SUBDIR += coot SUBDIR += crf++ + SUBDIR += datawarrior SUBDIR += dcl SUBDIR += devisor SUBDIR += dft_tools Added: head/science/datawarrior/Makefile ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/datawarrior/Makefile Mon Aug 27 06:15:56 2018 (r478179) @@ -0,0 +1,47 @@ +# $FreeBSD$ + +PORTNAME= datawarrior +DISTVERSION= 4.7.2 +CATEGORIES= science java +MASTER_SITES= https://www.dropbox.com/s/n3sjyh2ets71wo9/${DISTNAME}${EXTRACT_SUFX}?dl=1&dummy=/ +DISTNAME= datawarrior${DISTVERSION:S/.//g}Source + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Chemistry-aware multi-purpose data visualization and analysis program + +LICENSE= GPLv3 +LICENSE_FILE= ${WRKSRC}/gpl.txt + +BUILD_DEPENDS= openjfx8-devel>0:java/openjfx8-devel +RUN_DEPENDS= openjfx8-devel>0:java/openjfx8-devel + +USE_JAVA= yes +USE_LOCALE= en_US.UTF-8 +NO_ARCH= yes + +WRKSRC= ${WRKDIR}/publicSource + +do-build: + @cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} ./buildDataWarrior + +do-install: + cd ${WRKSRC} && ${COPYTREE_SHARE} . ${STAGEDIR}${DATADIR} + @${FIND} ${STAGEDIR}${DATADIR} -name "*.java" -delete + @cd ${STAGEDIR}${DATADIR} && ${RM} gpl.txt buildDataWarrior + @(echo "#!/bin/sh"; \ + echo ""; \ + echo "cd ${DATADIR} && sh runDataWarrior"; \ + ) > ${STAGEDIR}${PREFIX}/bin/${PORTNAME} + @${CHMOD} +x ${STAGEDIR}${PREFIX}/bin/${PORTNAME} + # delete empty directories hierarchically + @cd ${STAGEDIR}${DATADIR} && \ + while [ $$(${FIND} . -type d -empty | wc -l) != 0 ] ; do \ + ${FIND} . -type d -empty -delete; \ + done + +post-install: # autoplist: a lot of files in DATADIR + @cd ${STAGEDIR}${PREFIX} && \ + ${FIND} ${DATADIR:S/^${PREFIX}\///} -type f >> ${TMPPLIST} + @${ECHO} "bin/${PORTNAME}" >> ${TMPPLIST} + +.include <bsd.port.mk> Added: head/science/datawarrior/distinfo ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/datawarrior/distinfo Mon Aug 27 06:15:56 2018 (r478179) @@ -0,0 +1,3 @@ +TIMESTAMP = 1535337370 +SHA256 (datawarrior472Source.tar.gz) = eed79e80a36e90aebeb8e90aaa193f1e7213ed5d10175e27952e072e842a114d +SIZE (datawarrior472Source.tar.gz) = 22392950 Added: head/science/datawarrior/pkg-descr ============================================================================== --- /dev/null 00:00:00 1970 (empty, because file is newly added) +++ head/science/datawarrior/pkg-descr Mon Aug 27 06:15:56 2018 (r478179) @@ -0,0 +1,15 @@ +DataWarrior is an interactive, chemistry-aware multi-purpose data visualization +and analysis program. It works on any kind of tabular data assuming rows to +contain objects or cases and columns to contain associated properties and +values. DataWarrior provides interactive views to visualize data, to discover +correlations and to extract hidden knowledge from large data sets. Data filters +allow focusing on specific data subsets in a dynamic way. Chemical intelligence +is woven into the program to work with chemical structures as easily as with +numerical values. Data can be filtered on structural motives, views are +chemistry aware, molecule properties can be predicted from chemical structures, +and specialized cheminformatics methods explore the relationship between +chemical structure and measured properties. DataWarrior supports multiple files +types and allows merging data from files with data from the clipboard or from +databases. + +WWW: http://www.openmolecules.org/
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