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Date:      Wed, 23 Aug 2017 17:15:21 GMT
From:      pkg-fallout@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [package - 110arm64-default][science/R-cran-udunits2] Failed for R-cran-udunits2-0.13 in stage
Message-ID:  <201708231715.v7NHFLq8058054@thunderx1.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     tota@FreeBSD.org
Last committer: tota@FreeBSD.org
Ident:          $FreeBSD: head/science/R-cran-udunits2/Makefile 444440 2017-06-27 03:36:03Z tota $
Log URL:        http://thunderx1.nyi.freebsd.org/data/110arm64-default/448504/logs/R-cran-udunits2-0.13.log
Build URL:      http://thunderx1.nyi.freebsd.org/build.html?mastername=110arm64-default&build=448504
Log:

====>> Building science/R-cran-udunits2
build started at Wed Aug 23 17:12:26 UTC 2017
port directory: /usr/ports/science/R-cran-udunits2
building for: FreeBSD 110arm64-default-job-14 11.0-RELEASE-p1 FreeBSD 11.0-RELEASE-p1 arm64
maintained by: tota@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/R-cran-udunits2/Makefile 444440 2017-06-27 03:36:03Z tota $
Poudriere version: 3.1.19-61-ga8829ba9
Host OSVERSION: 1200040
Jail OSVERSION: 1100122
Job Id: 14

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PKGNAME=R-cran-udunits2-0.13
OLDPWD=/
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
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---Begin OPTIONS List---
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--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
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--End CONFIGURE_ENV--

--MAKE_ENV--
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 +" CXXFLAGS="-O2 -pipe -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
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--PLIST_SUB--
R_MOD_DIR=lib/R/library/udunits2
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/udunits2"
EXAMPLESDIR="share/examples/udunits2"
DATADIR="share/udunits2"
WWWDIR="www/udunits2"
ETCDIR="etc/udunits2"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/udunits2
DOCSDIR=/usr/local/share/doc/udunits2
EXAMPLESDIR=/usr/local/share/examples/udunits2
WWWDIR=/usr/local/www/udunits2
ETCDIR=/usr/local/etc/udunits2
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
ARCH=aarch64
CONFIGURE_MAX_CMD_LEN=262144
OPSYS=FreeBSD
OSREL=11.0
OSVERSION=1100122
PYTHONBASE=/usr/local
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_OSRELEASE=11.0-RELEASE-p1
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GID=0
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--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  1048576
stack size              (kbytes, -s)  1048576
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--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   R-cran-udunits2-0.13 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.1.txz
[110arm64-default-job-14] Installing pkg-1.10.1...
[110arm64-default-job-14] Extracting pkg-1.10.1: .......... done
===>   R-cran-udunits2-0.13 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of R-cran-udunits2-0.13
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by R-cran-udunits2-0.13 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by R-cran-udunits2-0.13 for building
=> SHA256 Checksum OK for udunits2_0.13.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by R-cran-udunits2-0.13 for building
===>  Extracting for R-cran-udunits2-0.13
=> SHA256 Checksum OK for udunits2_0.13.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for R-cran-udunits2-0.13
===========================================================================
=======================<phase: build-depends  >============================
===>   R-cran-udunits2-0.13 depends on file: /usr/local/bin/R - not found
===>   Installing existing package /packages/All/R-3.4.1_4.txz
[110arm64-default-job-14] Installing R-3.4.1_4...
[110arm64-default-job-14] `-- Installing cairo-1.14.8_1,2...
[110arm64-default-job-14] |   `-- Installing dri2proto-2.8...
[110arm64-default-job-14] |   `-- Extracting dri2proto-2.8: .... done
[110arm64-default-job-14] |   `-- Installing fontconfig-2.12.1,1...
[110arm64-default-job-14] |   | `-- Installing expat-2.2.1...
[110arm64-default-job-14] |   | `-- Extracting expat-2.2.1: .......... done
[110arm64-default-job-14] |   | `-- Installing freetype2-2.8...
[110arm64-default-job-14] |   | `-- Extracting freetype2-2.8: .......... done
[110arm64-default-job-14] |   `-- Extracting fontconfig-2.12.1,1: .......... done
Running fc-cache to build fontconfig cache...
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: skipping, no such directory
/var/db/fontconfig: cleaning cache directory
fc-cache: succeeded
[110arm64-default-job-14] |   `-- Installing gettext-runtime-0.19.8.1_1...
[110arm64-default-job-14] |   | `-- Installing indexinfo-0.2.6...
[110arm64-default-job-14] |   | `-- Extracting indexinfo-0.2.6: .... done
[110arm64-default-job-14] |   `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[110arm64-default-job-14] |   `-- Installing glib-2.50.2_4,1...
[110arm64-default-job-14] |   | `-- Installing libffi-3.2.1...
[110arm64-default-job-14] |   | `-- Extracting libffi-3.2.1: .......... done
[110arm64-default-job-14] |   | `-- Installing libiconv-1.14_10...
[110arm64-default-job-14] |   | `-- Extracting libiconv-1.14_10: .......... done
[110arm64-default-job-14] |   | `-- Installing pcre-8.40_1...
[110arm64-default-job-14] |   | `-- Extracting pcre-8.40_1: .......... done
[110arm64-default-job-14] |   | `-- Installing perl5-5.24.2...
[110arm64-default-job-14] |   | `-- Extracting perl5-5.24.2: .......... done
[110arm64-default-job-14] |   | `-- Installing python27-2.7.13_7...
<snip>
[110arm64-default-job-14] |   `-- Extracting encodings-1.0.4_3,1: .......... done
[110arm64-default-job-14] |   `-- Installing harfbuzz-1.4.8...
[110arm64-default-job-14] |   | `-- Installing graphite2-1.3.10...
[110arm64-default-job-14] |   | `-- Extracting graphite2-1.3.10: .......... done
[110arm64-default-job-14] |   `-- Extracting harfbuzz-1.4.8: .......... done
[110arm64-default-job-14] |   `-- Installing libXft-2.3.2_1...
[110arm64-default-job-14] |   `-- Extracting libXft-2.3.2_1: ......... done
[110arm64-default-job-14] |   `-- Installing xorg-fonts-truetype-7.7_1...
[110arm64-default-job-14] |   | `-- Installing dejavu-2.37...
[110arm64-default-job-14] |   |   `-- Installing mkfontdir-1.0.7...
[110arm64-default-job-14] |   |   | `-- Installing mkfontscale-1.1.2...
[110arm64-default-job-14] |   |   |   `-- Installing libfontenc-1.1.3_1...
[110arm64-default-job-14] |   |   |   `-- Extracting libfontenc-1.1.3_1: ......... done
[110arm64-default-job-14] |   |   | `-- Extracting mkfontscale-1.1.2: .. done
[110arm64-default-job-14] |   |   `-- Extracting mkfontdir-1.0.7: .. done
[110arm64-default-job-14] |   | `-- Extracting dejavu-2.37: .......... done
[110arm64-default-job-14] |   | `-- Installing font-bh-ttf-1.0.3_3...
[110arm64-default-job-14] |   | `-- Extracting font-bh-ttf-1.0.3_3: .......... done
[110arm64-default-job-14] |   | `-- Installing font-misc-ethiopic-1.0.3_3...
[110arm64-default-job-14] |   | `-- Extracting font-misc-ethiopic-1.0.3_3: ... done
[110arm64-default-job-14] |   | `-- Installing font-misc-meltho-1.0.3_3...
[110arm64-default-job-14] |   | `-- Extracting font-misc-meltho-1.0.3_3: .......... done
[110arm64-default-job-14] `-- Extracting pango-1.40.6: .......... done
[110arm64-default-job-14] `-- Installing tcl86-8.6.7...
[110arm64-default-job-14] `-- Extracting tcl86-8.6.7: .......... done
[110arm64-default-job-14] `-- Installing tk86-8.6.7...
[110arm64-default-job-14] `-- Extracting tk86-8.6.7: .......... done
[110arm64-default-job-14] `-- Installing wget-1.19.1_1...
[110arm64-default-job-14] `-- Extracting wget-1.19.1_1: .......... done
[110arm64-default-job-14] Extracting R-3.4.1_4: .......... done
Message from freetype2-2.8:
The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
the default, emulating a modern version of ClearType. This change inevitably
leads to different rendering results, and you might change port's options to
adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
variable).

The environment variable "FREETYPE_PROPERTIES" can be used to control the
driver properties. Example:

FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
	cff:no-stem-darkening=1 \
	autofitter:warping=1

This allows to select, say, the subpixel hinting mode at runtime for a given
application.

The controllable properties are listed in the section "Controlling FreeType
Modules" in the reference's table of contents
(/usr/local/share/doc/freetype2/reference/ft2-toc.html, if documentation was installed).
Message from perl5-5.24.2:
The /usr/bin/perl symlink has been removed starting with Perl 5.20.
For shebangs, you should either use:

#!/usr/local/bin/perl

or

#!/usr/bin/env perl

The first one will only work if you have a /usr/local/bin/perl,
the second will work as long as perl is in PATH.
Message from python27-2.7.13_7:
===========================================================================

Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

===========================================================================
Message from ca_root_nss-3.32:
********************************* WARNING *********************************

FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.

Assessment and verification of trust is the complete responsibility of the
system administrator.

*********************************** NOTE **********************************

This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem

***************************************************************************
Message from gcc5-5.4.0_3:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc5

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
Message from trousers-0.3.14_1:
To run tcsd automatically, add the following line to /etc/rc.conf:

tcsd_enable="YES"

You might want to edit /usr/local/etc/tcsd.conf to reflect your setup.

If you want to use tcsd with software TPM emulator, use the following
configuration in /etc/rc.conf:

tcsd_enable="YES"
tcsd_mode="emulator"
tpmd_enable="YES"

To use TPM, add your_account to '_tss' group like following:

# pw groupmod _tss -m your_account
Message from ghostscript9-agpl-base-9.16_5:
Note: in order to use the script "dvipdf", dvips must be installed.
This program is provided by another package print/tex-dvipsk.

FAPIfontmap and FAPIcidfmap in /usr/local/share/ghostscript/9.16/Resource/Init
have to be configured if you want to use FAPI feature.
Message from dejavu-2.37:
Make sure that the freetype module is loaded.  If it is not, add the following
line to the "Modules" section of your X Windows configuration file:

	Load "freetype"

Add the following line to the "Files" section of X Windows configuration file:

	FontPath "/usr/local/share/fonts/dejavu/"

Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
Message from R-3.4.1_4:
========================================================================
On 11.1 and later, there is a problem downloading R packages when
gfortran is chosen as the fortran compiler.

Use either of these workarounds until a permanent solution is found.

1. If you are on an amd64 system, you can use flang as the fortran
   compiler.

2. If you choose gfortran as the fortran compiler, you can add

   options(download.file.method="wget")

   to ~/.Rprofile followed by a newline.

Details: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=221127
========================================================================
===>   R-cran-udunits2-0.13 depends on file: /usr/local/bin/R - found
===>   Returning to build of R-cran-udunits2-0.13
===>   R-cran-udunits2-0.13 depends on executable: gfortran5 - found
===>   R-cran-udunits2-0.13 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   R-cran-udunits2-0.13 depends on shared library: libudunits2.so - not found
===>   Installing existing package /packages/All/udunits-2.2.25.txz
[110arm64-default-job-14] Installing udunits-2.2.25...
[110arm64-default-job-14] Extracting udunits-2.2.25: .......... done
===>   R-cran-udunits2-0.13 depends on shared library: libudunits2.so - found (/usr/local/lib/libudunits2.so)
===>   Returning to build of R-cran-udunits2-0.13
===>   R-cran-udunits2-0.13 depends on shared library: libexpat.so - found (/usr/local/lib/libexpat.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for R-cran-udunits2-0.13
===========================================================================
=======================<phase: build          >============================
===========================================================================
=======================<phase: run-depends    >============================
===>   R-cran-udunits2-0.13 depends on file: /usr/local/bin/R - found
===>   R-cran-udunits2-0.13 depends on executable: gfortran5 - found
===========================================================================
=======================<phase: stage          >============================
===>  Staging for R-cran-udunits2-0.13
===>   Generating temporary packing list
* installing *source* package 'udunits2' ...
** package 'udunits2' successfully unpacked and MD5 sums checked
checking for gcc... /usr/local/bin/clang40
checking whether the C compiler works... no
configure: error: in `/wrkdirs/usr/ports/science/R-cran-udunits2/work/udunits2':
configure: error: C compiler cannot create executables
See `config.log' for more details
ERROR: configuration failed for package 'udunits2'
* removing '/wrkdirs/usr/ports/science/R-cran-udunits2/work/stage/usr/local/lib/R/library/udunits2'
*** Error code 1

Stop.
make: stopped in /usr/ports/science/R-cran-udunits2



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