From owner-svn-ports-all@freebsd.org Mon Dec 3 08:52:04 2018 Return-Path: Delivered-To: svn-ports-all@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id F2BF8131AF0A; Mon, 3 Dec 2018 08:52:03 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 93B4B780FE; Mon, 3 Dec 2018 08:52:03 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org (repo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:0]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 7526C139C1; Mon, 3 Dec 2018 08:52:03 +0000 (UTC) (envelope-from yuri@FreeBSD.org) Received: from repo.freebsd.org ([127.0.1.37]) by repo.freebsd.org (8.15.2/8.15.2) with ESMTP id wB38q3W9032425; Mon, 3 Dec 2018 08:52:03 GMT (envelope-from yuri@FreeBSD.org) Received: (from yuri@localhost) by repo.freebsd.org (8.15.2/8.15.2/Submit) id wB38q33i032424; Mon, 3 Dec 2018 08:52:03 GMT (envelope-from yuri@FreeBSD.org) Message-Id: <201812030852.wB38q33i032424@repo.freebsd.org> X-Authentication-Warning: repo.freebsd.org: yuri set sender to yuri@FreeBSD.org using -f From: Yuri Victorovich Date: Mon, 3 Dec 2018 08:52:03 +0000 (UTC) To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r486503 - head/biology/gatk X-SVN-Group: ports-head X-SVN-Commit-Author: yuri X-SVN-Commit-Paths: head/biology/gatk X-SVN-Commit-Revision: 486503 X-SVN-Commit-Repository: ports MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit X-Rspamd-Queue-Id: 93B4B780FE X-Spamd-Result: default: False [0.25 / 15.00]; local_wl_from(0.00)[FreeBSD.org]; NEURAL_HAM_MEDIUM(-0.04)[-0.037,0]; NEURAL_SPAM_LONG(0.00)[0.005,0]; NEURAL_SPAM_SHORT(0.29)[0.287,0]; ASN(0.00)[asn:11403, ipnet:2610:1c1:1::/48, country:US] X-Rspamd-Server: mx1.freebsd.org X-BeenThere: svn-ports-all@freebsd.org X-Mailman-Version: 2.1.29 Precedence: list List-Id: SVN commit messages for the ports tree List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 03 Dec 2018 08:52:04 -0000 Author: yuri Date: Mon Dec 3 08:52:03 2018 New Revision: 486503 URL: https://svnweb.freebsd.org/changeset/ports/486503 Log: biology/gatk: Correct the target Modified: head/biology/gatk/Makefile Modified: head/biology/gatk/Makefile ============================================================================== --- head/biology/gatk/Makefile Mon Dec 3 08:40:53 2018 (r486502) +++ head/biology/gatk/Makefile Mon Dec 3 08:52:03 2018 (r486503) @@ -30,7 +30,7 @@ DEPS_CACHE_DIR= /tmp # should be ${WRKDIR}, but workar PLIST_FILES= bin/${PORTNAME} \ ${JAVAJARDIR}/GenomeAnalysisTK-${PORTVERSION}.jar -post-patch: # to rebuild the deps archive: 1. remove post-patch: 2. remove --offline 3. build 4. package ${DEPS_CACHE_DIR}/gradle-${PORTNAME} into the deps archive +post-extract: # to rebuild the deps archive: 1. remove post-extract: 2. remove --offline 3. build 4. package ${DEPS_CACHE_DIR}/gradle-${PORTNAME} into the deps archive @cd ${DEPS_CACHE_DIR} && ${TAR} xzf ${DISTDIR}/${PORTNAME}-${DISTVERSION}-deps${EXTRACT_SUFX} do-build: