Date: Tue, 14 Aug 2018 05:14:51 GMT From: pkg-fallout@FreeBSD.org To: pkg-fallout@FreeBSD.org Subject: [package - head-armv6-default][math/pdal] Failed for pdal-1.7.2_2 in configure Message-ID: <201808140514.w7E5EpQD031391@beefy8.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: lbartoletti@tuxfamily.org Last committer: jbeich@FreeBSD.org Ident: $FreeBSD: head/math/pdal/Makefile 476723 2018-08-09 06:58:30Z jbeich $ Log URL: http://beefy8.nyi.freebsd.org/data/head-armv6-default/p476857_s337595/logs/pdal-1.7.2_2.log Build URL: http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p476857_s337595 Log: =>> Building math/pdal build started at Tue Aug 14 05:12:02 UTC 2018 port directory: /usr/ports/math/pdal package name: pdal-1.7.2_2 building for: FreeBSD head-armv6-default-job-12 12.0-ALPHA1 FreeBSD 12.0-ALPHA1 1200077 arm maintained by: lbartoletti@tuxfamily.org Makefile ident: $FreeBSD: head/math/pdal/Makefile 476723 2018-08-09 06:58:30Z jbeich $ Poudriere version: 3.2.7-2-g1cf194be Host OSVERSION: 1200069 Jail OSVERSION: 1200077 Job Id: 12 !!! Jail is newer than host. (Jail: 1200077, Host: 1200069) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv6 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1200077 UNAME_v=FreeBSD 12.0-ALPHA1 1200077 UNAME_r=12.0-ALPHA1 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.7-2-g1cf194be MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv6-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for pdal-1.7.2_2: BASH=off: BASH completion ICEBRIDGE=off: Enable Icebridge plugin MBIO=off: Enable MBIO plugin PGPOINTCLOUD=on: Enable Coherent PostgreSQL Point Cloud plugin PYTHON=on: Enable Python plugin SQLITE=on: Enable SQLite plugin TESTS=off: Enable Tests ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- lbartoletti@tuxfamily.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/math/pdal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/pdal/work HOME=/wrkdirs/usr/ports/math/pdal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/pdal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/pdal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/pdal/work HOME=/wrkdirs/usr/ports/math/pdal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/pdal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/math/pdal/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-I/usr/local/include" LDFLAGS=" -L/usr/local/lib" LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing -D_GLIBCXX_USE_C99" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" BASH="@comment " NO_BASH="" ICEBRIDGE="@comment " NO_ICEBRIDGE="" MBIO="@comment " NO_MBIO="" PGPOINTCLOUD="" NO_PGPOINTCLOUD="@comment " PYTHON="" NO_PYTHON="@comment " SQLITE="" NO_SQLITE="@comment " TESTS="@comment " NO_TESTS="" CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd12 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pdal" EXAMPLESDIR="share/examples/pdal" DATADIR="share/pdal" WWWDIR="www/pdal" ETCDIR="etc/pdal" --End PLIST_SUB-- --SUB_LIST-- BASH="@comment " NO_BASH="" ICEBRIDGE="@comment " NO_ICEBRIDGE="" MBIO="@comment " NO_MBIO="" PGPOINTCLOUD="" NO_PGPOINTCLOUD="@comment " PYTHON="" NO_PYTHON="@comment " SQLITE="" NO_SQLITE="@comment " TESTS="@comment " NO_TESTS="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pdal DOCSDIR=/usr/local/share/doc/pdal EXAMPLESDIR=/usr/local/share/examples/pdal WWWDIR=/usr/local/www/pdal ETCDIR=/usr/local/etc/pdal --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv6 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 # stable/10 includes src.conf too late but make.conf is in sys.mk .if ${.CURDIR:M/poudriere/jails/10*/usr/src/usr.bin/xlint*} # Disable build of llib now that head no longer has lint(1) LINT= true .endif #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_f2776b26=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes CC_OUTPUT_9d218390_160933ec=yes CC_OUTPUT_9d218390_fb62803b=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 6.0.1 (tags/RELEASE_601/final 335540) (based on LLVM 6.0.1) Target: armv6-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv6 OPSYS=FreeBSD _OSRELEASE=12.0-ALPHA1 OSREL=12.0 OSVERSION=1200077 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> pdal-1.7.2_2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5_1.txz <snip> *********************************** NOTE ********************************** This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem *************************************************************************** ===> pdal-1.7.2_2 depends on file: /usr/local/bin/cmake - found ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on executable: ninja - not found ===> Installing existing package /packages/All/ninja-1.8.2,2.txz [head-armv6-default-job-12] Installing ninja-1.8.2,2... [head-armv6-default-job-12] Extracting ninja-1.8.2,2: ....... done ===> pdal-1.7.2_2 depends on executable: ninja - found ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on package: pkgconf>=1.3.0_1 - not found ===> Installing existing package /packages/All/pkgconf-1.4.2,1.txz [head-armv6-default-job-12] Installing pkgconf-1.4.2,1... [head-armv6-default-job-12] Extracting pkgconf-1.4.2,1: .......... done ===> pdal-1.7.2_2 depends on package: pkgconf>=1.3.0_1 - found ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on file: /usr/local/bin/python2.7 - found =========================================================================== =======================<phase: lib-depends >============================ ===> pdal-1.7.2_2 depends on shared library: libgdal.so - not found ===> Installing existing package /packages/All/gdal-2.2.4.txz [head-armv6-default-job-12] Installing gdal-2.2.4... [head-armv6-default-job-12] `-- Installing giflib-5.1.4... [head-armv6-default-job-12] `-- Extracting giflib-5.1.4: .......... done [head-armv6-default-job-12] `-- Installing jasper-1.900.1_17... [head-armv6-default-job-12] | `-- Installing jpeg-turbo-1.5.3... [head-armv6-default-job-12] | `-- Extracting jpeg-turbo-1.5.3: .......... done [head-armv6-default-job-12] `-- Extracting jasper-1.900.1_17: .......... done [head-armv6-default-job-12] `-- Installing json-c-0.13... [head-armv6-default-job-12] `-- Extracting json-c-0.13: .......... done [head-armv6-default-job-12] `-- Installing libgeotiff-1.4.2... [head-armv6-default-job-12] | `-- Installing jbigkit-2.1_1... [head-armv6-default-job-12] | `-- Extracting jbigkit-2.1_1: .......... done [head-armv6-default-job-12] | `-- Installing proj-5.1.0... [head-armv6-default-job-12] | `-- Extracting proj-5.1.0: .......... done [head-armv6-default-job-12] | `-- Installing tiff-4.0.9_1... [head-armv6-default-job-12] | `-- Extracting tiff-4.0.9_1: .......... done [head-armv6-default-job-12] `-- Extracting libgeotiff-1.4.2: .......... done [head-armv6-default-job-12] `-- Installing png-1.6.34... [head-armv6-default-job-12] `-- Extracting png-1.6.34: .......... done [head-armv6-default-job-12] Extracting gdal-2.2.4: .......... done ===> pdal-1.7.2_2 depends on shared library: libgdal.so - found (/usr/local/lib/libgdal.so) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: libgeos.so - not found ===> Installing existing package /packages/All/geos-3.6.2.txz [head-armv6-default-job-12] Installing geos-3.6.2... [head-armv6-default-job-12] Extracting geos-3.6.2: .......... done ===> pdal-1.7.2_2 depends on shared library: libgeos.so - found (/usr/local/lib/libgeos.so) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: libboost_thread.so - not found ===> Installing existing package /packages/All/boost-libs-1.68.0.txz [head-armv6-default-job-12] Installing boost-libs-1.68.0... [head-armv6-default-job-12] `-- Installing icu-62.1_2,1... [head-armv6-default-job-12] `-- Extracting icu-62.1_2,1: .......... done [head-armv6-default-job-12] Extracting boost-libs-1.68.0: .......... done Message from boost-libs-1.68.0: You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===> pdal-1.7.2_2 depends on shared library: libboost_thread.so - found (/usr/local/lib/libboost_thread.so) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: libcurl.so - found (/usr/local/lib/libcurl.so) ===> pdal-1.7.2_2 depends on shared library: libgeotiff.so - found (/usr/local/lib/libgeotiff.so) ===> pdal-1.7.2_2 depends on shared library: libxml2.so - not found ===> Installing existing package /packages/All/libxml2-2.9.7.txz [head-armv6-default-job-12] Installing libxml2-2.9.7... [head-armv6-default-job-12] Extracting libxml2-2.9.7: .......... done ===> pdal-1.7.2_2 depends on shared library: libxml2.so - found (/usr/local/lib/libxml2.so) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: liblaszip.so - not found ===> Installing existing package /packages/All/laszip-3.2.2.txz [head-armv6-default-job-12] Installing laszip-3.2.2... [head-armv6-default-job-12] Extracting laszip-3.2.2: .......... done ===> pdal-1.7.2_2 depends on shared library: liblaszip.so - found (/usr/local/lib/liblaszip.so) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: libjsoncpp.so - found (/usr/local/lib/libjsoncpp.so) ===> pdal-1.7.2_2 depends on shared library: libpq.so.5 - not found ===> Installing existing package /packages/All/postgresql95-client-9.5.14.txz [head-armv6-default-job-12] Installing postgresql95-client-9.5.14... [head-armv6-default-job-12] `-- Installing perl5-5.26.2... [head-armv6-default-job-12] `-- Extracting perl5-5.26.2: .......... done [head-armv6-default-job-12] Extracting postgresql95-client-9.5.14: .......... done Message from perl5-5.26.2: The /usr/bin/perl symlink has been removed starting with Perl 5.20. For shebangs, you should either use: #!/usr/local/bin/perl or #!/usr/bin/env perl The first one will only work if you have a /usr/local/bin/perl, the second will work as long as perl is in PATH. Message from postgresql95-client-9.5.14: The PostgreSQL port has a collection of "side orders": postgresql-docs For all of the html documentation p5-Pg A perl5 API for client access to PostgreSQL databases. postgresql-tcltk If you want tcl/tk client support. postgresql-jdbc For Java JDBC support. postgresql-odbc For client access from unix applications using ODBC as access method. Not needed to access unix PostgreSQL servers from Win32 using ODBC. See below. ruby-postgres, py-psycopg2 For client access to PostgreSQL databases using the ruby & python languages. postgresql-plperl, postgresql-pltcl & postgresql-plruby For using perl5, tcl & ruby as procedural languages. postgresql-contrib Lots of contributed utilities, postgresql functions and datatypes. There you find pg_standby, pgcrypto and many other cool things. etc... ===> pdal-1.7.2_2 depends on shared library: libpq.so.5 - found (/usr/local/lib/libpq.so.5) ===> Returning to build of pdal-1.7.2_2 ===> pdal-1.7.2_2 depends on shared library: libsqlite3.so - not found ===> Installing existing package /packages/All/sqlite3-3.24.0_1.txz [head-armv6-default-job-12] Installing sqlite3-3.24.0_1... [head-armv6-default-job-12] Extracting sqlite3-3.24.0_1: .......... done ===> pdal-1.7.2_2 depends on shared library: libsqlite3.so - found (/usr/local/lib/libsqlite3.so) ===> Returning to build of pdal-1.7.2_2 =========================================================================== =======================<phase: configure >============================ ===> Configuring for pdal-1.7.2_2 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/math/pdal/work/.build -- The CXX compiler identification is Clang 6.0.1 -- The C compiler identification is Clang 6.0.1 -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- Check for working CXX compiler: /nxb-bin/usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Check for working C compiler: /nxb-bin/usr/bin/cc -- Check for working C compiler: /nxb-bin/usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Found GDAL: /usr/local/lib/libgdal.so (Required is at least version "1.9.0") -- Found GeoTIFF: /usr/local/lib/libgeotiff.so -- Looking for pthread.h -- Looking for pthread.h - found -- Found Threads: TRUE -- Found ZLIB: /usr/lib/libz.so (found version "1.2.11") -- Found JSONCPP: /usr/local/lib/libjsoncpp.so (Required is at least version "1.6.2") -- Found LibXml2: /usr/local/lib/libxml2.so (found version "2.9.7") -- Found CURL: /usr/local/lib/libcurl.so (found version "7.61.0") -- Found PostgreSQL: /usr/local/include -- Numpy output: CMake Error at /usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:137 (message): Could NOT find NumPy (missing: NUMPY_VERSION NUMPY_INCLUDE_DIR) (Required is at least version "1.5") Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE) cmake/modules/FindNumPy.cmake:32 (FIND_PACKAGE_HANDLE_STANDARD_ARGS) cmake/python.cmake:16 (find_package) plugins/python/CMakeLists.txt:5 (include) -- Configuring incomplete, errors occurred! See also "/wrkdirs/usr/ports/math/pdal/work/.build/CMakeFiles/CMakeOutput.log". *** Error code 1 Stop. make: stopped in /usr/ports/math/pdal
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