Date: Wed, 01 Nov 2000 12:36:40 +0200 From: johann@egenetics.com To: FreeBSD-gnats-submit@freebsd.org Subject: ports/22474: Port update: biology/emboss (maintainer) Message-ID: <E13qvG4-000Nq7-00@fling.sanbi.ac.za>
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>Number: 22474 >Category: ports >Synopsis: Port update: biology/emboss (maintainer) >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports >State: open >Quarter: >Keywords: >Date-Required: >Class: change-request >Submitter-Id: current-users >Arrival-Date: Wed Nov 01 02:40:01 PST 2000 >Closed-Date: >Last-Modified: >Originator: Johann Visagie >Release: FreeBSD 3.5-STABLE i386 >Organization: Electric Genetics >Environment: >Description: - Update biology/emboss from 1.6.0 to 1.7.0 - Fairly major bugfix release, including some new features >How-To-Repeat: >Fix: diff -ruN emboss.bak/Makefile emboss/Makefile --- emboss.bak/Makefile Wed Nov 1 12:34:17 2000 +++ emboss/Makefile Wed Nov 1 10:48:07 2000 @@ -6,7 +6,7 @@ # PORTNAME= emboss -PORTVERSION= 1.6.0 +PORTVERSION= 1.7.0 CATEGORIES= biology MASTER_SITES= ftp://ftp.uk.embnet.org/pub/EMBOSS/ \ ftp://ftp.no.embnet.org/pub/EMBOSS/ diff -ruN emboss.bak/distinfo emboss/distinfo --- emboss.bak/distinfo Wed Nov 1 12:34:17 2000 +++ emboss/distinfo Wed Nov 1 10:48:23 2000 @@ -1 +1 @@ -MD5 (EMBOSS-1.6.0.tar.gz) = 871302f43b2018c108914ecfc59a1bb0 +MD5 (EMBOSS-1.7.0.tar.gz) = 61758add8d2d6bdb9e043fe93c37f341 diff -ruN emboss.bak/pkg-plist emboss/pkg-plist --- emboss.bak/pkg-plist Wed Nov 1 12:34:17 2000 +++ emboss/pkg-plist Wed Nov 1 11:29:49 2000 @@ -31,6 +31,7 @@ bin/embossdata bin/emma bin/emowse +bin/entret bin/equicktandem bin/est2genome bin/etandem @@ -181,6 +182,7 @@ share/EMBOSS/acd/emma.acd share/EMBOSS/acd/emowse.acd share/EMBOSS/acd/entrails.acd +share/EMBOSS/acd/entret.acd share/EMBOSS/acd/equicktandem.acd share/EMBOSS/acd/est2genome.acd share/EMBOSS/acd/etandem.acd @@ -648,6 +650,7 @@ share/EMBOSS/test/wormpep/wormpep share/doc/EMBOSS/manuals/admin.sty share/doc/EMBOSS/manuals/admin.tex +share/doc/EMBOSS/manuals/program.ps.gz share/doc/EMBOSS/programs/html/SITE-DIRECTED.html share/doc/EMBOSS/programs/html/alignment_global_group.html share/doc/EMBOSS/programs/html/alignment_group.html @@ -668,6 +671,7 @@ share/doc/EMBOSS/programs/html/comparison_group.html share/doc/EMBOSS/programs/html/complex.html share/doc/EMBOSS/programs/html/compseq.html +share/doc/EMBOSS/programs/html/cons.html share/doc/EMBOSS/programs/html/cpg_islands_group.html share/doc/EMBOSS/programs/html/cpgplot.html share/doc/EMBOSS/programs/html/cpgplot0.gif @@ -700,6 +704,7 @@ share/doc/EMBOSS/programs/html/embossdata.html share/doc/EMBOSS/programs/html/emma.html share/doc/EMBOSS/programs/html/emowse.html +share/doc/EMBOSS/programs/html/entret.html share/doc/EMBOSS/programs/html/enzyme_kinetics_group.html share/doc/EMBOSS/programs/html/equicktandem.html share/doc/EMBOSS/programs/html/est2genome.html @@ -797,6 +802,7 @@ share/doc/EMBOSS/programs/html/seqret.html share/doc/EMBOSS/programs/html/seqretall.html share/doc/EMBOSS/programs/html/seqretset.html +share/doc/EMBOSS/programs/html/seqretsplit.html share/doc/EMBOSS/programs/html/sequence_comparison_group.html share/doc/EMBOSS/programs/html/sequence_composition_group.html share/doc/EMBOSS/programs/html/sequence_display_group.html @@ -850,6 +856,7 @@ share/doc/EMBOSS/programs/text/codcmp.txt share/doc/EMBOSS/programs/text/complex.txt share/doc/EMBOSS/programs/text/compseq.txt +share/doc/EMBOSS/programs/text/cons.txt share/doc/EMBOSS/programs/text/cpgplot.txt share/doc/EMBOSS/programs/text/cpgreport.txt share/doc/EMBOSS/programs/text/cusp.txt @@ -870,6 +877,7 @@ share/doc/EMBOSS/programs/text/embossdata.txt share/doc/EMBOSS/programs/text/emma.txt share/doc/EMBOSS/programs/text/emowse.txt +share/doc/EMBOSS/programs/text/entret.txt share/doc/EMBOSS/programs/text/equicktandem.txt share/doc/EMBOSS/programs/text/est2genome.txt share/doc/EMBOSS/programs/text/etandem.txt @@ -936,6 +944,7 @@ share/doc/EMBOSS/programs/text/seqret.txt share/doc/EMBOSS/programs/text/seqretall.txt share/doc/EMBOSS/programs/text/seqretset.txt +share/doc/EMBOSS/programs/text/seqretsplit.txt share/doc/EMBOSS/programs/text/showdb.txt share/doc/EMBOSS/programs/text/showfeat.txt share/doc/EMBOSS/programs/text/showorf.txt >Release-Note: >Audit-Trail: >Unformatted: To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-ports" in the body of the message
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