From owner-freebsd-pkg-fallout@freebsd.org Mon Apr 23 15:34:28 2018 Return-Path: Delivered-To: freebsd-pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id B289CFA48B7 for ; Mon, 23 Apr 2018 15:34:27 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mailman.ysv.freebsd.org (mailman.ysv.freebsd.org [IPv6:2001:1900:2254:206a::50:5]) by mx1.freebsd.org (Postfix) with ESMTP id 285F579521 for ; Mon, 23 Apr 2018 15:34:27 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: by mailman.ysv.freebsd.org (Postfix) id DA899FA48B6; Mon, 23 Apr 2018 15:34:26 +0000 (UTC) Delivered-To: pkg-fallout@mailman.ysv.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mailman.ysv.freebsd.org (Postfix) with ESMTP id 8C603FA48B5 for ; Mon, 23 Apr 2018 15:34:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client CN "mxrelay.nyi.freebsd.org", Issuer "Let's Encrypt Authority X3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 3D7D1794FC for ; Mon, 23 Apr 2018 15:34:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy16.nyi.freebsd.org (beefy16.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:e3]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 357AC261A3 for ; Mon, 23 Apr 2018 15:34:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy16.nyi.freebsd.org (localhost [127.0.0.1]) by beefy16.nyi.freebsd.org (8.15.2/8.15.2) with ESMTP id w3NFYQqd012393 for ; Mon, 23 Apr 2018 15:34:26 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy16.nyi.freebsd.org (8.15.2/8.15.2/Submit) id w3NFYQ1Q012391; Mon, 23 Apr 2018 15:34:26 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Mon, 23 Apr 2018 15:34:26 GMT From: pkg-fallout@FreeBSD.org Message-Id: <201804231534.w3NFYQ1Q012391@beefy16.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - head-armv7-default][science/PETSc] Failed for PETSc-3.8.4 in configure X-BeenThere: freebsd-pkg-fallout@freebsd.org X-Mailman-Version: 2.1.25 Precedence: list List-Id: Fallout logs from package building List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , X-List-Received-Date: Mon, 23 Apr 2018 15:34:28 -0000 You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Last committer: yuri@FreeBSD.org Ident: $FreeBSD: head/science/PETSc/Makefile 465576 2018-03-26 10:11:16Z yuri $ Log URL: http://beefy16.nyi.freebsd.org/data/head-armv7-default/p467853_s332849/logs/PETSc-3.8.4.log Build URL: http://beefy16.nyi.freebsd.org/build.html?mastername=head-armv7-default&build=p467853_s332849 Log: =>> Building science/PETSc build started at Mon Apr 23 15:33:56 UTC 2018 port directory: /usr/ports/science/PETSc package name: PETSc-3.8.4 building for: FreeBSD head-armv7-default-job-09 12.0-CURRENT FreeBSD 12.0-CURRENT 1200062 arm maintained by: yuri@FreeBSD.org Makefile ident: $FreeBSD: head/science/PETSc/Makefile 465576 2018-03-26 10:11:16Z yuri $ Poudriere version: 3.2.6-1-ga0ae87a0 Host OSVERSION: 1200060 Jail OSVERSION: 1200062 Job Id: 09 !!! Jail is newer than host. (Jail: 1200062, Host: 1200060) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/csh UNAME_p=armv7 UNAME_m=arm ABI_FILE=/usr/lib/crt1.o OSVERSION=1200062 UNAME_v=FreeBSD 12.0-CURRENT 1200062 UNAME_r=12.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local QEMU_EMULATING=1 USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.6-1-ga0ae87a0 MASTERMNT=/usr/local/poudriere/data/.m/head-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=head-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/head-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --with-shared-libraries=1 --with-mpi-dir=/usr/local CFLAGS="-O2 -pipe -fno-strict-aliasing -msse2" CXXFLAGS="-O2 -pipe -fno-strict-aliasing -msse2" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -B/usr/local/bin" LIBS="" --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" MAKE=gmake PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/PETSc/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/PETSc/work HOME=/wrkdirs/usr/ports/science/PETSc/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/PETSc/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran6" FC="gfortran6" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc6" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc6" XDG_DATA_HOME=/wrkdirs/usr/ports/science/PETSc/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/PETSc/work HOME=/wrkdirs/usr/ports/science/PETSc/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/PETSc/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="/nxb-bin/u sr/bin/cpp" CPPFLAGS="" LDFLAGS=" -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc6 -L/usr/local/lib/gcc6 -B/usr/local/bin" LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- SHLIB=3.8.4 SHL=3.8 PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd12 PYTHON_PYOEXTENSION=pyo PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_SUFFIX=27 PYTHON_VER=2.7 PYTHON_VERSION=python2.7 PYTHON2="" PYTHON3="@comment " OSREL=12.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/PETSc" EXAMPLESDIR="share/examples/PETSc" DATADIR="share/petsc" WWWDIR="www/PETSc" ETCDIR="etc/PETSc" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/petsc DOCSDIR=/usr/local/share/doc/PETSc EXAMPLESDIR=/usr/local/share/examples/PETSc WWWDIR=/usr/local/www/PETSc ETCDIR=/usr/local/etc/PETSc --End SUB_LIST-- ---Begin make.conf--- .sinclude "/etc/make.nxb.conf" USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=arm MACHINE_ARCH=armv7 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_9d218390=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: armv7-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _ALTCCVERSION_9d218390=none _CXXINTERNAL_9c45a5b1=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: armv7-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin "/nxb-bin/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_9d218390_58173849=yes CC_OUTPUT_9d218390_9bdba57c=yes CC_OUTPUT_9d218390_6a4fe7f5=yes CC_OUTPUT_9d218390_6bcac02b=yes CC_OUTPUT_9d218390_67d20829=yes CC_OUTPUT_9d218390_bfa62e83=yes CC_OUTPUT_9d218390_f0b4d593=yes CC_OUTPUT_9d218390_308abb44=yes CC_OUTPUT_9d218390_f00456e5=yes CC_OUTPUT_9d218390_65ad290d=yes CC_OUTPUT_9d218390_b2657cc3=yes CC_OUTPUT_9d218390_380987f7=yes _OBJC_CCVERSION_9d218390=FreeBSD clang version 6.0.0 (tags/RELEASE_600/final 326565) (based on LLVM 6.0.0) Target: armv7-unknown-freebsd12.0-gnueabihf Thread model: posix InstalledDir: /nxb-bin/usr/bin _OBJC_ALTCCVERSION_9d218390=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=12.0-CURRENT OSREL=12.0 OSVERSION=1200062 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=262144 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- ---Begin make.nxb.conf--- CC=/nxb-bin/usr/bin/cc CPP=/nxb-bin/usr/bin/cpp CXX=/nxb-bin/usr/bin/c++ AS=/nxb-bin/usr/bin/as NM=/nxb-bin/usr/bin/nm LD=/nxb-bin/usr/bin/ld OBJCOPY=/nxb-bin/usr/bin/objcopy SIZE=/nxb-bin/usr/bin/size STRIPBIN=/nxb-bin/usr/bin/strip SED=/nxb-bin/usr/bin/sed RANLIB=/nxb-bin/usr/bin/ranlib YACC=/nxb-bin/usr/bin/yacc MAKE=/nxb-bin/usr/bin/make STRINGS=/nxb-bin/usr/bin/strings AWK=/nxb-bin/usr/bin/awk FLEX=/nxb-bin/usr/bin/flex ---End make.nxb.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License BSD2CLAUSE accepted by the user =========================================================================== =================================================== ===> PETSc-3.8.4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.10.5.txz [head-armv7-default-job-09] Installing pkg-1.10.5... [head-armv7-default-job-09] Extracting pkg-1.10.5: .......... done ===> PETSc-3.8.4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of PETSc-3.8.4 =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by PETSc-3.8.4 for building =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by PETSc-3.8.4 for building => SHA256 Checksum OK for petsc-3.8.4.tar.gz. =========================================================================== =================================================== =========================================================================== [head-armv7-default-job-09] `-- Extracting libffi-3.2.1_2: .......... done [head-armv7-default-job-09] `-- Installing readline-7.0.3_1... [head-armv7-default-job-09] `-- Extracting readline-7.0.3_1: .......... done [head-armv7-default-job-09] Extracting python27-2.7.14_1: .......... done Message from python27-2.7.14_1: =========================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter =========================================================================== ===> PETSc-3.8.4 depends on file: /usr/local/bin/python2.7 - found ===> Returning to build of PETSc-3.8.4 ===> PETSc-3.8.4 depends on file: /usr/local/bin/as - found ===> PETSc-3.8.4 depends on file: /usr/local/libdata/pkgconfig/x11.pc - not found ===> Installing existing package /packages/All/libX11-1.6.5,1.txz [head-armv7-default-job-09] Installing libX11-1.6.5,1... [head-armv7-default-job-09] `-- Installing kbproto-1.0.7... [head-armv7-default-job-09] `-- Extracting kbproto-1.0.7: .......... done [head-armv7-default-job-09] `-- Installing libXau-1.0.8_3... [head-armv7-default-job-09] | `-- Installing xproto-7.0.31... [head-armv7-default-job-09] | `-- Extracting xproto-7.0.31: .......... done [head-armv7-default-job-09] `-- Extracting libXau-1.0.8_3: .......... done [head-armv7-default-job-09] `-- Installing libXdmcp-1.1.2... [head-armv7-default-job-09] `-- Extracting libXdmcp-1.1.2: ......... done [head-armv7-default-job-09] `-- Installing libxcb-1.12_2... [head-armv7-default-job-09] | `-- Installing libpthread-stubs-0.4... [head-armv7-default-job-09] | `-- Extracting libpthread-stubs-0.4: .... done [head-armv7-default-job-09] | `-- Installing libxml2-2.9.7... [head-armv7-default-job-09] | `-- Extracting libxml2-2.9.7: .......... done [head-armv7-default-job-09] `-- Extracting libxcb-1.12_2: .......... done [head-armv7-default-job-09] Extracting libX11-1.6.5,1: .......... done ===> PETSc-3.8.4 depends on file: /usr/local/libdata/pkgconfig/x11.pc - found ===> Returning to build of PETSc-3.8.4 =========================================================================== =================================================== ===> PETSc-3.8.4 depends on shared library: libmpich.so - not found ===> Installing existing package /packages/All/mpich2-1.5_9,5.txz [head-armv7-default-job-09] Installing mpich2-1.5_9,5... [head-armv7-default-job-09] `-- Installing bash-4.4.19... [head-armv7-default-job-09] `-- Extracting bash-4.4.19: .......... done [head-armv7-default-job-09] `-- Installing libXt-1.1.5,1... [head-armv7-default-job-09] | `-- Installing libSM-1.2.2_3,1... [head-armv7-default-job-09] | | `-- Installing libICE-1.0.9_1,1... [head-armv7-default-job-09] | | `-- Extracting libICE-1.0.9_1,1: .......... done [head-armv7-default-job-09] | `-- Extracting libSM-1.2.2_3,1: .......... done [head-armv7-default-job-09] `-- Extracting libXt-1.1.5,1: .......... done [head-armv7-default-job-09] Extracting mpich2-1.5_9,5: .......... done Message from mpich2-1.5_9,5: ======================================================================= MPICH-2 has been installed under /usr/local. /!\ IMPORTANT /!\ Please change the password in /usr/local/etc/mpd.conf ======================================================================= ===> PETSc-3.8.4 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so) ===> Returning to build of PETSc-3.8.4 ===> PETSc-3.8.4 depends on shared library: libblas.so - not found ===> Installing existing package /packages/All/blas-3.5.0_4.txz [head-armv7-default-job-09] Installing blas-3.5.0_4... [head-armv7-default-job-09] Extracting blas-3.5.0_4: ....... done ===> PETSc-3.8.4 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so) ===> Returning to build of PETSc-3.8.4 ===> PETSc-3.8.4 depends on shared library: liblapack.so - not found ===> Installing existing package /packages/All/lapack-3.5.0_4.txz [head-armv7-default-job-09] Installing lapack-3.5.0_4... [head-armv7-default-job-09] Extracting lapack-3.5.0_4: .......... done ===> PETSc-3.8.4 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so) ===> Returning to build of PETSc-3.8.4 =========================================================================== =================================================== ===> Configuring for PETSc-3.8.4 qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) =============================================================================== Configuring PETSc to compile on your system =============================================================================== TESTING: configureExternalPackagesDir from config.framework(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/framework.py:830) TESTING: configureDebuggers from config.utilities.debuggers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/utilities/debuggers.py:22) TESTING: configureGit from config.sourceControl(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/sourceControl.py:24) TESTING: configureMercurial from config.sourceControl(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/sourceControl.py:35) TESTING: configureCLanguage from PETSc.options.languages(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/languages.py:27) TESTING: configureDirectories from PETSc.options.petscdir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/petscdir.py:23) TESTING: getDatafilespath from PETSc.options.dataFilesPath(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/dataFilesPath.py:29) TESTING: configureInstallationMethod from PETSc.options.petscclone(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/petscclone.py:20) TESTING: configureArchitecture from PETSc.options.arch(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/arch.py:36) TESTING: setInstallDir from PETSc.options.installDir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/installDir.py:35) TESTING: saveReconfigure from PETSc.options.installDir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/installDir.py:75) TESTING: cleanInstallDir from PETSc.options.installDir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/installDir.py:68) TESTING: configureInstallDir from PETSc.options.installDir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/installDir.py:52) TESTING: restoreReconfigure from PETSc.options.installDir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/installDir.py:88) TESTING: setExternalPackagesDir from PETSc.options.externalpackagesdir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/externalpackagesdir.py:15) TESTING: cleanExternalpackagesDir from PETSc.options.externalpackagesdir(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/PETSc/options/externalpackagesdir.py:22) TESTING: printEnvVariables from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:1614) TESTING: resetEnvCompilers from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:1621) =============================================================================== ***** WARNING: CC (set to /nxb-bin/usr/bin/cc) found in environment variables - ignoring use ./configure CC=$CC if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: CXX (set to /nxb-bin/usr/bin/c++) found in environment variables - ignoring use ./configure CXX=$CXX if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: FC (set to gfortran6) found in environment variables - ignoring use ./configure FC=$FC if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: F77 (set to gfortran6) found in environment variables - ignoring use ./configure F77=$F77 if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: FCFLAGS (set to -Wl,-rpath=/usr/local/lib/gcc6) found in environment variables - ignoring use ./configure FCFLAGS=$FCFLAGS if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: FFLAGS (set to -O -Wl,-rpath=/usr/local/lib/gcc6) found in environment variables - ignoring use ./configure FFLAGS=$FFLAGS if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: CPP (set to /nxb-bin/usr/bin/cpp) found in environment variables - ignoring use ./configure CPP=$CPP if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: MAKEFLAGS (set to .MAKE.LEVEL.ENV=MAKELEVEL ARCH=armv7 CONFIGURE_MAX_CMD_LEN=262144 OPSYS=FreeBSD OSREL=12.0 OSVERSION=1200062 PYTHONBASE=/usr/local _OSRELEASE=12.0-CURRENT) found in environment variables - ignoring use ./configure MAKEFLAGS=$MAKEFLAGS if you really want to use that value ****** =============================================================================== =============================================================================== ***** WARNING: AR (set to /usr/local/bin/ar) found in environment variables - ignoring use ./configure AR=$AR if you really want to use that value ****** =============================================================================== TESTING: checkEnvCompilers from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:1651) TESTING: checkMPICompilerOverride from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:1586) TESTING: requireMpiLdPath from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:1605) TESTING: checkVendor from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:426) TESTING: checkInitialFlags from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:436) TESTING: checkCCompiler from config.setCompilers(/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config/BuildSystem/config/setCompilers.py:568)qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) qemu: unsupported syscall: 563 (calling anyway) ******************************************************************************* UNABLE to CONFIGURE with GIVEN OPTIONS (see configure.log for details): ------------------------------------------------------------------------------- MPI compiler wrappers in /usr/local/bin do not work. See http://www.mcs.anl.gov/petsc/documentation/faq.html#mpi-compilers ******************************************************************************* ===> Script "configure" failed unexpectedly. Please report the problem to yuri@FreeBSD.org [maintainer] and attach the "/wrkdirs/usr/ports/science/PETSc/work/petsc-3.8.4/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** Error code 1 Stop. make: stopped in /usr/ports/science/PETSc