Date: Tue, 27 Oct 2015 08:21:25 +0000 (UTC) From: Wen Heping <wen@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r400221 - in head/math/R: . files Message-ID: <201510270821.t9R8LPfe013486@repo.freebsd.org>
next in thread | raw e-mail | index | archive | help
Author: wen Date: Tue Oct 27 08:21:25 2015 New Revision: 400221 URL: https://svnweb.freebsd.org/changeset/ports/400221 Log: - Update to 3.2.2 PR: 203418 Submitted by: wen@(myself) Reviewed by: tota@ Approved by: maintainer(timeout, > 25 days) Thanks to: freebsd-bugs@mackler.org harrison.grundy@astrodoggroup.com Modified: head/math/R/Makefile head/math/R/distinfo head/math/R/files/patch-configure head/math/R/files/patch-src__nmath__standalone__test.c head/math/R/files/patch-src_extra_tre_tre-internal.h head/math/R/pkg-plist Modified: head/math/R/Makefile ============================================================================== --- head/math/R/Makefile Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/Makefile Tue Oct 27 08:21:25 2015 (r400221) @@ -2,8 +2,7 @@ # $FreeBSD$ PORTNAME?= R -PORTVERSION= 3.0.2 -PORTREVISION= 7 +PORTVERSION= 3.2.2 CATEGORIES= math lang MASTER_SITES= http://cran.r-project.org/%SUBDIR%/ \ ftp://cran.r-project.org/pub/R/%SUBDIR%/ \ @@ -22,15 +21,13 @@ MASTER_SITES= http://cran.r-project.org/ MASTER_SITE_SUBDIR= src/base/R-${PORTVERSION:C|\..*||} DISTNAME= R-${PORTVERSION} -PATCH_SITES= LOCAL/bf -PATCHFILES= R-patched-20131112-r64207.diff.bz2 - MAINTAINER= bf@FreeBSD.org -COMMENT?= A language for statistical computing and graphics +COMMENT?= Language for statistical computing and graphics LICENSE= GPLv2 -BUILD_DEPENDS= ${LOCALBASE}/bin/gsed:${PORTSDIR}/textproc/gsed +BUILD_DEPENDS= ${LOCALBASE}/bin/gsed:${PORTSDIR}/textproc/gsed \ + texi2dvi:${PORTSDIR}/print/texinfo CONFIGURE_ENV= LIBR_LDFLAGS="${LDFLAGS}" OBJC="${CC}" \ SED="${LOCALBASE}/bin/gsed" \ @@ -51,7 +48,7 @@ PLIST_SUB= RMATH_SOVERSION="${RMATH_SOV USE_LDCONFIG= yes .else # LIBRMATH_SLAVEPORT ALL_TARGET= all -INSTALL_TARGET= install +INSTALL_TARGET= install-strip CONFIGURE_ARGS= --enable-memory-profiling rdocdir=${DOCSDIR} \ --with-system-bzlib --with-system-zlib CONFIGURE_ENV+= FCFLAGS="${FFLAGS}" \ @@ -70,7 +67,7 @@ OPTIONS_DEFAULT+= ICU PCRE_PORT THREADS RUN_DEPENDS+= ${LOCALBASE}/bin/gsed:${PORTSDIR}/textproc/gsed USE_LDCONFIG= ${PREFIX}/lib/R/lib #now only used to build the R.1 manpage: -USES+= makeinfo perl5 +USES+= perl5 USE_PERL5= build OPTIONS_DEFINE+= GHOSTSCRIPT INFO_MANUALS JPEG LETTER_PAPER LIBR \ @@ -263,12 +260,14 @@ PLIST_SUB+= X11="@comment " .if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS} ALL_TARGET+= info +CONFIGURE_ENV+= INSTALL_INFO="${LOCALBASE}/bin/install-info" \ + MAKEINFO="${LOCALBASE}/bin/makeinfo" INFO= R-FAQ R-admin R-data R-exts R-intro R-lang .endif .if ${PORT_OPTIONS:MPDF_MANUALS} && ${PORT_OPTIONS:MDOCS} USE_TEX= texlive dvipsk kpathsea pdftex -BUILD_DEPENDS += texi2dvi:${PORTSDIR}/print/texinfo +#BUILD_DEPENDS += texi2dvi:${PORTSDIR}/print/texinfo ALL_TARGET+= pdf CONFIGURE_ENV += INSTALL_INFO="${LOCALBASE}/bin/install-info" \ MAKEINFO="${LOCALBASE}/bin/makeinfo" @@ -327,7 +326,7 @@ post-patch: ${TAR} -czf temptgz --exclude='*/po/*' @$$tarfile ; \ ${MV} temptgz $$tarfile ; \ done) - @${REINPLACE_CMD} -e '/ls -d $$(srcdir)\/inst/d' \ + @${REINPLACE_CMD} -e '/ls -d $$srcdir\/inst/d' \ ${WRKSRC}/src/library/translations/Makefile.in .endif @@ -350,7 +349,7 @@ do-build: do-install: @${MKDIR} ${STAGEDIR}${PREFIX}/lib/R/lib - @${INSTALL_DATA} ${WRKSRC}/src/main/libR.a ${STAGEDIR}${PREFIX}/lib/R/lib + ${INSTALL_DATA} ${WRKSRC}/src/main/libR.a ${STAGEDIR}${PREFIX}/lib/R/lib .else # LIBR_SLAVEPORT @@ -382,9 +381,9 @@ post-install: .endif # LIBR_SLAVEPORT .else # !LIBRMATH_SLAVEPORT do-install: - @${INSTALL_DATA} ${WRKSRC}/src/include/Rmath.h ${STAGEDIR}${PREFIX}/include - @${INSTALL_DATA} ${BUILD_WRKSRC}/libRmath.a ${STAGEDIR}${PREFIX}/lib - @${INSTALL_LIB} ${BUILD_WRKSRC}/libRmath.so \ + ${INSTALL_DATA} ${WRKSRC}/src/include/Rmath.h ${STAGEDIR}${PREFIX}/include + ${INSTALL_DATA} ${BUILD_WRKSRC}/libRmath.a ${STAGEDIR}${PREFIX}/lib + ${INSTALL_LIB} ${BUILD_WRKSRC}/libRmath.so \ ${STAGEDIR}${PREFIX}/lib/libRmath.so.${RMATH_SOVERSION} @(cd ${STAGEDIR}${PREFIX}/lib; ${LN} -sf libRmath.so.${RMATH_SOVERSION} libRmath.so) Modified: head/math/R/distinfo ============================================================================== --- head/math/R/distinfo Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/distinfo Tue Oct 27 08:21:25 2015 (r400221) @@ -1,4 +1,2 @@ -SHA256 (R-3.0.2.tar.gz) = 956e05ad60447955049285420b5a48e0526aa4db676fd9eadb4bcfb7ccdc024b -SIZE (R-3.0.2.tar.gz) = 25364181 -SHA256 (R-patched-20131112-r64207.diff.bz2) = 536243821d94f9328c3d35609fc5b0a6dc9c5f8c2a9bfa39b3d6fba4d9d5c60e -SIZE (R-patched-20131112-r64207.diff.bz2) = 60325 +SHA256 (R-3.2.2.tar.gz) = 9c9152e74134b68b0f3a1c7083764adc1cb56fd8336bec003fd0ca550cd2461d +SIZE (R-3.2.2.tar.gz) = 29772864 Modified: head/math/R/files/patch-configure ============================================================================== --- head/math/R/files/patch-configure Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/files/patch-configure Tue Oct 27 08:21:25 2015 (r400221) @@ -1,17 +1,108 @@ -# Recognize makeinfo from texinfo 6.0 -# Extra linker flags for threaded tk ---- configure.orig 2013-09-17 22:06:13 UTC +--- configure.orig 2015-08-13 09:21:16 UTC +++ configure -@@ -5181,7 +5181,7 @@ if ${r_cv_prog_makeinfo_v4+:} false; the +@@ -20589,13 +20589,13 @@ if test "x$ac_cv_lib_mw__mwvalidcheckl" + LIBM="-lmw" + fi + +- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for cos in -lm" >&5 +-$as_echo_n "checking for cos in -lm... " >&6; } ++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for cos in -lquadmath -lm" >&5 ++$as_echo_n "checking for cos in -lquadmath -lm... " >&6; } + if ${ac_cv_lib_m_cos+:} false; then : $as_echo_n "(cached) " >&6 else - makeinfo_version=`${MAKEINFO} --version | \ -- grep "^makeinfo" | sed 's/[^)]*) \(.*\)/\1/'` -+ grep -E "^(makeinfo|texi2any)" | sed 's/[^)]*) \(.*\)/\1/'` - makeinfo_version_maj=`echo ${makeinfo_version} | cut -f1 -d.` - makeinfo_version_min=`echo ${makeinfo_version} | \ - cut -f2 -d. | tr -dc '0123456789.' ` -@@ -32742,7 +32742,7 @@ fi + ac_check_lib_save_LIBS=$LIBS +-LIBS="-lm $LIBS" ++LIBS="-lquadmath -lm $LIBS" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext + /* end confdefs.h. */ + +@@ -20626,18 +20626,18 @@ fi + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_m_cos" >&5 + $as_echo "$ac_cv_lib_m_cos" >&6; } + if test "x$ac_cv_lib_m_cos" = xyes; then : +- LIBM="$LIBM -lm" ++ LIBM="$LIBM -lquadmath -lm" + fi + + ;; + *) +- { $as_echo "$as_me:${as_lineno-$LINENO}: checking for cos in -lm" >&5 +-$as_echo_n "checking for cos in -lm... " >&6; } ++ { $as_echo "$as_me:${as_lineno-$LINENO}: checking for cos in -lquadmath -lm" >&5 ++$as_echo_n "checking for cos in -lquadmath -lm... " >&6; } + if ${ac_cv_lib_m_cos+:} false; then : + $as_echo_n "(cached) " >&6 + else + ac_check_lib_save_LIBS=$LIBS +-LIBS="-lm $LIBS" ++LIBS="-lquadmath -lm $LIBS" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext + /* end confdefs.h. */ + +@@ -20668,7 +20668,7 @@ fi + { $as_echo "$as_me:${as_lineno-$LINENO}: result: $ac_cv_lib_m_cos" >&5 + $as_echo "$ac_cv_lib_m_cos" >&6; } + if test "x$ac_cv_lib_m_cos" = xyes; then : +- LIBM="-lm" ++ LIBM="-lquadmath -lm" + fi + + ;; +@@ -20679,13 +20679,13 @@ esac + ## </NOTE> + ## AC_CHECK_LIBM computes LIBM but does not add to LIBS, hence we do + ## the following as well. +-{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for sin in -lm" >&5 +-$as_echo_n "checking for sin in -lm... " >&6; } ++{ $as_echo "$as_me:${as_lineno-$LINENO}: checking for sin in -lquadmath -lm" >&5 ++$as_echo_n "checking for sin in -lquadmath -lm... " >&6; } + if ${ac_cv_lib_m_sin+:} false; then : + $as_echo_n "(cached) " >&6 + else + ac_check_lib_save_LIBS=$LIBS +-LIBS="-lm $LIBS" ++LIBS="-lquadmath -lm $LIBS" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext + /* end confdefs.h. */ + +@@ -20720,7 +20720,7 @@ if test "x$ac_cv_lib_m_sin" = xyes; then + #define HAVE_LIBM 1 + _ACEOF + +- LIBS="-lm $LIBS" ++ LIBS="-lquadmath -lm $LIBS" + + fi + +@@ -26166,7 +26166,7 @@ fi + ## if nothing was obtained for SHLIB_CXXLDFLAGS. + ## + ## Note also that some systems (formerly AIX) do not allow for unresolved +-## symbols at link time. For such systems, we link against -lm (in case ++## symbols at link time. For such systems, we link against -lquadmath -lm (in case + ## it exists) when building a shlib module via SHLIB_LIBADD. + + main_ld="${CC}" +@@ -28310,7 +28310,7 @@ if ${ac_cv_lib_rt_clock_gettime+:} false + $as_echo_n "(cached) " >&6 + else + ac_check_lib_save_LIBS=$LIBS +-LIBS="-lrt $LIBS" ++LIBS=" $LIBS" + cat confdefs.h - <<_ACEOF >conftest.$ac_ext + /* end confdefs.h. */ + +@@ -28353,7 +28353,7 @@ if test "x$ac_cv_lib_rt_clock_gettime" = + #define HAVE_LIBRT 1 + _ACEOF + +- LIBS="-lrt $LIBS" ++ LIBS="$LIBS" + + fi + +@@ -33267,7 +33267,7 @@ fi ## Part 2. Try finding the tk library. if test -n "${TK_CONFIG}"; then . ${TK_CONFIG} Modified: head/math/R/files/patch-src__nmath__standalone__test.c ============================================================================== --- head/math/R/files/patch-src__nmath__standalone__test.c Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/files/patch-src__nmath__standalone__test.c Tue Oct 27 08:21:25 2015 (r400221) @@ -1,6 +1,6 @@ ---- src/nmath/standalone/test.c.orig 2009-06-22 18:12:00.000000000 -0400 -+++ src/nmath/standalone/test.c 2009-06-22 18:12:34.000000000 -0400 -@@ -38,7 +38,7 @@ +--- src/nmath/standalone/test.c.orig 2012-04-15 22:05:35 UTC ++++ src/nmath/standalone/test.c +@@ -38,7 +38,7 @@ main(int argc, char** argv) qnorm(0.7, 0.0, 1.0, 0, 0); printf("*** loaded '%s'\n", argv[0]); set_seed(123, 456); Modified: head/math/R/files/patch-src_extra_tre_tre-internal.h ============================================================================== --- head/math/R/files/patch-src_extra_tre_tre-internal.h Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/files/patch-src_extra_tre_tre-internal.h Tue Oct 27 08:21:25 2015 (r400221) @@ -1,4 +1,4 @@ ---- src/extra/tre/tre-internal.h.orig 2015-01-20 15:25:01 UTC +--- src/extra/tre/tre-internal.h.orig 2014-06-13 22:15:07 UTC +++ src/extra/tre/tre-internal.h @@ -17,6 +17,7 @@ #include <wctype.h> Modified: head/math/R/pkg-plist ============================================================================== --- head/math/R/pkg-plist Tue Oct 27 08:19:08 2015 (r400220) +++ head/math/R/pkg-plist Tue Oct 27 08:21:25 2015 (r400221) @@ -8,8 +8,6 @@ %%DOCSDIR%%/NEWS.rds %%DOCSDIR%%/RESOURCES %%DOCSDIR%%/THANKS -bin/R -bin/Rscript %%DOCSDIR%%/html/NEWS.html %%DOCSDIR%%/html/R.css %%DOCSDIR%%/html/SearchOn.html @@ -25,12 +23,9 @@ bin/Rscript %%DOCSDIR%%/html/resources.html %%DOCSDIR%%/html/right.jpg %%DOCSDIR%%/html/up.jpg +bin/R +bin/Rscript lib/R/COPYING -lib/R/NEWS -lib/R/NEWS.0 -lib/R/NEWS.1 -lib/R/NEWS.2 -lib/R/NEWS.pdf lib/R/SVN-REVISION lib/R/bin/BATCH lib/R/bin/COMPILE @@ -77,6 +72,7 @@ lib/R/include/R_ext/Error.h lib/R/include/R_ext/GetX11Image.h lib/R/include/R_ext/GraphicsDevice.h lib/R/include/R_ext/GraphicsEngine.h +lib/R/include/R_ext/Itermacros.h lib/R/include/R_ext/Lapack.h lib/R/include/R_ext/Linpack.h lib/R/include/R_ext/MathThreads.h @@ -87,6 +83,7 @@ lib/R/include/R_ext/PrtUtil.h lib/R/include/R_ext/QuartzDevice.h lib/R/include/R_ext/RS.h lib/R/include/R_ext/RStartup.h +lib/R/include/R_ext/Rallocators.h lib/R/include/R_ext/Random.h lib/R/include/R_ext/Rdynload.h lib/R/include/R_ext/R-ftp-http.h @@ -130,6 +127,7 @@ lib/R/library/KernSmooth/html/R.css lib/R/library/KernSmooth/libs/KernSmooth.so %%NLS%%lib/R/library/KernSmooth/po/de/LC_MESSAGES/R-KernSmooth.mo %%NLS%%lib/R/library/KernSmooth/po/en@quot/LC_MESSAGES/R-KernSmooth.mo +%%NLS%%lib/R/library/KernSmooth/po/fr/LC_MESSAGES/R-KernSmooth.mo %%NLS%%lib/R/library/KernSmooth/po/ko/LC_MESSAGES/R-KernSmooth.mo %%NLS%%lib/R/library/KernSmooth/po/pl/LC_MESSAGES/R-KernSmooth.mo lib/R/library/MASS/CITATION @@ -182,6 +180,7 @@ lib/R/library/Matrix/Copyrights lib/R/library/Matrix/DESCRIPTION lib/R/library/Matrix/Doxyfile lib/R/library/Matrix/INDEX +lib/R/library/Matrix/NEWS.Rd lib/R/library/Matrix/Meta/Rd.rds lib/R/library/Matrix/Meta/data.rds lib/R/library/Matrix/Meta/hsearch.rds @@ -225,6 +224,7 @@ lib/R/library/Matrix/external/USCounties lib/R/library/Matrix/external/lund_a.mtx lib/R/library/Matrix/external/lund_a.rsa lib/R/library/Matrix/external/pores_1.mtx +lib/R/library/Matrix/external/symA.rda lib/R/library/Matrix/external/symW.rda lib/R/library/Matrix/external/test3comp.rda lib/R/library/Matrix/external/utm300.rua @@ -244,6 +244,9 @@ lib/R/library/Matrix/libs/Matrix.so %%NLS%%lib/R/library/Matrix/po/de/LC_MESSAGES/R-Matrix.mo %%NLS%%lib/R/library/Matrix/po/en@quot/LC_MESSAGES/Matrix.mo %%NLS%%lib/R/library/Matrix/po/en@quot/LC_MESSAGES/R-Matrix.mo +%%NLS%%lib/R/library/Matrix/po/fr/LC_MESSAGES/Matrix.mo +%%NLS%%lib/R/library/Matrix/po/fr/LC_MESSAGES/R-Matrix.mo +%%NLS%%lib/R/library/Matrix/po/ko/LC_MESSAGES/R-Matrix.mo %%NLS%%lib/R/library/Matrix/po/pl/LC_MESSAGES/Matrix.mo %%NLS%%lib/R/library/Matrix/po/pl/LC_MESSAGES/R-Matrix.mo lib/R/library/Matrix/test-tools-1.R @@ -288,6 +291,7 @@ lib/R/library/boot/R/boot.rdx lib/R/library/boot/data/Rdata.rdb lib/R/library/boot/data/Rdata.rds lib/R/library/boot/data/Rdata.rdx +lib/R/library/boot/bd.q lib/R/library/boot/help/AnIndex lib/R/library/boot/help/aliases.rds lib/R/library/boot/help/boot.rdb @@ -337,6 +341,7 @@ lib/R/library/cluster/Meta/links.rds lib/R/library/cluster/Meta/nsInfo.rds lib/R/library/cluster/Meta/package.rds lib/R/library/cluster/NAMESPACE +lib/R/library/cluster/NEWS.Rd lib/R/library/cluster/R/cluster lib/R/library/cluster/R/cluster.rdb lib/R/library/cluster/R/cluster.rdx @@ -352,6 +357,11 @@ lib/R/library/cluster/html/00Index.html lib/R/library/cluster/html/R.css lib/R/library/cluster/libs/cluster.so %%NLS%%lib/R/library/cluster/po/de/LC_MESSAGES/R-cluster.mo +%%NLS%%lib/R/library/cluster/po/de/LC_MESSAGES/cluster.mo +%%NLS%%lib/R/library/cluster/po/en@quot/LC_MESSAGES/cluster.mo +%%NLS%%lib/R/library/cluster/po/fr/LC_MESSAGES/R-cluster.mo +%%NLS%%lib/R/library/cluster/po/ko/LC_MESSAGES/R-cluster.mo +%%NLS%%lib/R/library/cluster/po/ko/LC_MESSAGES/cluster.mo %%NLS%%lib/R/library/cluster/po/en@quot/LC_MESSAGES/R-cluster.mo %%NLS%%lib/R/library/cluster/po/pl/LC_MESSAGES/R-cluster.mo lib/R/library/codetools/DESCRIPTION @@ -453,6 +463,10 @@ lib/R/library/grDevices/NAMESPACE lib/R/library/grDevices/R/grDevices lib/R/library/grDevices/R/grDevices.rdb lib/R/library/grDevices/R/grDevices.rdx +lib/R/library/grDevices/afm/ArialMT-Bold.afm.gz +lib/R/library/grDevices/afm/ArialMT-BoldItalic.afm.gz +lib/R/library/grDevices/afm/ArialMT-Italic.afm.gz +lib/R/library/grDevices/afm/ArialMT.afm.gz lib/R/library/grDevices/afm/CM_boldx_10.afm.gz lib/R/library/grDevices/afm/CM_boldx_italic_10.afm.gz lib/R/library/grDevices/afm/CM_italic_10.afm.gz @@ -608,6 +622,7 @@ lib/R/library/graphics/html/R.css lib/R/library/graphics/libs/graphics.so lib/R/library/grid/DESCRIPTION lib/R/library/grid/INDEX +lib/R/library/grid/doc/DivByZero.txt lib/R/library/grid/Meta/Rd.rds lib/R/library/grid/Meta/hsearch.rds lib/R/library/grid/Meta/links.rds @@ -699,9 +714,9 @@ lib/R/library/lattice/html/R.css lib/R/library/lattice/libs/lattice.so %%NLS%%lib/R/library/lattice/po/de/LC_MESSAGES/R-lattice.mo %%NLS%%lib/R/library/lattice/po/en@quot/LC_MESSAGES/R-lattice.mo +%%NLS%%lib/R/library/lattice/po/pl/LC_MESSAGES/R-lattice.mo %%NLS%%lib/R/library/lattice/po/fr/LC_MESSAGES/R-lattice.mo %%NLS%%lib/R/library/lattice/po/ko/LC_MESSAGES/R-lattice.mo -%%NLS%%lib/R/library/lattice/po/pl_PL/LC_MESSAGES/R-lattice.mo lib/R/library/methods/DESCRIPTION lib/R/library/methods/INDEX lib/R/library/methods/Meta/Rd.rds @@ -744,6 +759,16 @@ lib/R/library/mgcv/help/paths.rds lib/R/library/mgcv/html/00Index.html lib/R/library/mgcv/html/R.css lib/R/library/mgcv/libs/mgcv.so +%%NLS%%lib/R/library/mgcv/po/de/LC_MESSAGES/R-mgcv.mo +%%NLS%%lib/R/library/mgcv/po/de/LC_MESSAGES/mgcv.mo +%%NLS%%lib/R/library/mgcv/po/en@quot/LC_MESSAGES/R-mgcv.mo +%%NLS%%lib/R/library/mgcv/po/en@quot/LC_MESSAGES/mgcv.mo +%%NLS%%lib/R/library/mgcv/po/fr/LC_MESSAGES/R-mgcv.mo +%%NLS%%lib/R/library/mgcv/po/fr/LC_MESSAGES/mgcv.mo +%%NLS%%lib/R/library/mgcv/po/ko/LC_MESSAGES/R-mgcv.mo +%%NLS%%lib/R/library/mgcv/po/ko/LC_MESSAGES/mgcv.mo +%%NLS%%lib/R/library/mgcv/po/pl/LC_MESSAGES/R-mgcv.mo +%%NLS%%lib/R/library/mgcv/po/pl/LC_MESSAGES/mgcv.mo lib/R/library/nlme/CITATION lib/R/library/nlme/DESCRIPTION lib/R/library/nlme/INDEX @@ -905,6 +930,7 @@ lib/R/library/spatial/help/spatial.rdx lib/R/library/spatial/html/00Index.html lib/R/library/spatial/html/R.css lib/R/library/spatial/libs/spatial.so +%%NLS%%lib/R/library/spatial/po/ko/LC_MESSAGES/R-spatial.mo %%NLS%%lib/R/library/spatial/po/de/LC_MESSAGES/R-spatial.mo %%NLS%%lib/R/library/spatial/po/en@quot/LC_MESSAGES/R-spatial.mo %%NLS%%lib/R/library/spatial/po/fr/LC_MESSAGES/R-spatial.mo @@ -996,9 +1022,11 @@ lib/R/library/stats/help/stats.rdx lib/R/library/stats/html/00Index.html lib/R/library/stats/html/R.css lib/R/library/stats/libs/stats.so +lib/R/library/survival/COPYRIGHTS lib/R/library/survival/CITATION lib/R/library/survival/DESCRIPTION lib/R/library/survival/INDEX +lib/R/library/survival/data/datalist lib/R/library/survival/Meta/Rd.rds lib/R/library/survival/Meta/data.rds lib/R/library/survival/Meta/hsearch.rds @@ -1015,6 +1043,18 @@ lib/R/library/survival/data/Rdata.rdb lib/R/library/survival/data/Rdata.rds lib/R/library/survival/data/Rdata.rdx lib/R/library/survival/doc/index.html +lib/R/library/survival/doc/adjcurve.R +lib/R/library/survival/doc/adjcurve.Rnw +lib/R/library/survival/doc/adjcurve.pdf +lib/R/library/survival/doc/compete.R +lib/R/library/survival/doc/compete.Rnw +lib/R/library/survival/doc/compete.pdf +lib/R/library/survival/doc/splines.R +lib/R/library/survival/doc/splines.Rnw +lib/R/library/survival/doc/splines.pdf +lib/R/library/survival/doc/tests.R +lib/R/library/survival/doc/tests.Rnw +lib/R/library/survival/doc/tests.pdf lib/R/library/survival/doc/timedep.R lib/R/library/survival/doc/timedep.Rnw lib/R/library/survival/doc/timedep.pdf @@ -1071,6 +1111,8 @@ lib/R/library/tools/Meta/links.rds lib/R/library/tools/Meta/nsInfo.rds lib/R/library/tools/Meta/package.rds lib/R/library/tools/NAMESPACE +lib/R/library/tools/R/sysdata.rdb +lib/R/library/tools/R/sysdata.rdx lib/R/library/tools/R/tools lib/R/library/tools/R/tools.rdb lib/R/library/tools/R/tools.rdx @@ -1131,6 +1173,7 @@ lib/R/library/translations/DESCRIPTION %%NLS%%lib/R/library/translations/de/LC_MESSAGES/stats.mo %%NLS%%lib/R/library/translations/de/LC_MESSAGES/tcltk.mo %%NLS%%lib/R/library/translations/de/LC_MESSAGES/tools.mo +%%NLS%%lib/R/library/translations/de/LC_MESSAGES/utils.mo %%NLS%%lib/R/library/translations/en/LC_MESSAGES/R.mo %%NLS%%lib/R/library/translations/en@quot/LC_MESSAGES/R-base.mo %%NLS%%lib/R/library/translations/en@quot/LC_MESSAGES/R-compiler.mo @@ -1394,12 +1437,12 @@ lib/R/library/utils/misc/exDIF.dif %%X11%%lib/R/modules/R_de.so lib/R/modules/internet.so lib/R/modules/lapack.so -lib/R/modules/vfonts.so lib/R/share/R/REMOVE.R lib/R/share/R/examples-footer.R lib/R/share/R/examples-header.R lib/R/share/R/nspackloader.R lib/R/share/R/tests-startup.R +lib/R/share/Rd/macros/system.Rd lib/R/share/dictionaries/en_stats.rds lib/R/share/encodings/Adobe-glyphlist lib/R/share/encodings/character-sets @@ -1441,18 +1484,30 @@ lib/R/share/texmf/tex/latex/ts1aett.fd man/man1/R.1.gz man/man1/Rscript.1.gz %%DOCSDIR%%/html/NEWS.2.html -%%DOCSDIR%%/manual/R-FAQ.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-FAQ.pdf -%%DOCSDIR%%/manual/R-admin.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-admin.pdf -%%DOCSDIR%%/manual/R-data.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-data.pdf -%%DOCSDIR%%/manual/R-exts.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-exts.pdf -%%DOCSDIR%%/manual/R-intro.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-intro.pdf -%%DOCSDIR%%/manual/R-ints.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-ints.pdf -%%DOCSDIR%%/manual/R-lang.html %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/R-lang.pdf %%PORTDOCS%%%%PDF_MANUAL%%%%DOCSDIR%%/manual/fullrefman.pdf +%%PORTDOCS%%%%DOCSDIR%%/BioC_mirrors.csv +%%PORTDOCS%%%%DOCSDIR%%/NEWS +%%PORTDOCS%%%%DOCSDIR%%/NEWS.0 +%%PORTDOCS%%%%DOCSDIR%%/NEWS.1 +%%PORTDOCS%%%%DOCSDIR%%/NEWS.2 +%%PORTDOCS%%%%DOCSDIR%%/NEWS.pdf +%%PORTDOCS%%%%DOCSDIR%%/manual/images/QQ.png +%%PORTDOCS%%%%DOCSDIR%%/manual/images/ecdf.png +%%PORTDOCS%%%%DOCSDIR%%/manual/images/fig11.png +%%PORTDOCS%%%%DOCSDIR%%/manual/images/fig12.png +%%PORTDOCS%%%%DOCSDIR%%/manual/images/hist.png +%%PORTDOCS%%%%DOCSDIR%%/manual/images/ice.png +%%PORTDOCS%%%%DOCSDIR%%/manual/R-FAQ.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-admin.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-data.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-exts.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-intro.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-ints.html +%%PORTDOCS%%%%DOCSDIR%%/manual/R-lang.html
Want to link to this message? Use this URL: <https://mail-archive.FreeBSD.org/cgi/mid.cgi?201510270821.t9R8LPfe013486>