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Date:      Wed, 14 May 2008 14:10:07 GMT
From:      dfilter@FreeBSD.ORG (dfilter service)
To:        freebsd-ports-bugs@FreeBSD.org
Subject:   Re: ports/118438: commit references a PR
Message-ID:  <200805141410.m4EEA7uU077911@freefall.freebsd.org>

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The following reply was made to PR ports/118438; it has been noted by GNATS.

From: dfilter@FreeBSD.ORG (dfilter service)
To: bug-followup@FreeBSD.org
Cc:  
Subject: Re: ports/118438: commit references a PR
Date: Wed, 14 May 2008 14:07:08 +0000 (UTC)

 pav         2008-05-14 14:07:01 UTC
 
   FreeBSD ports repository
 
   Modified files:
     biology              Makefile 
   Added files:
     biology/njplot       Makefile distinfo pkg-descr 
     biology/njplot/files patch-makefile 
   Log:
   NJplot is a tree drawing program able to draw any phylogenetic tree expressed
   in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
   package). NJplot is especially convenient for rooting the unrooted trees
   obtained from parsimony, distance or maximum likelihood tree-building methods.
   
   The package contains the following programs:
   njplot      - draw phylogenetic trees and interactively modify them
   newicktops  - non-interactive version rendering into a PostScript file
   newicktotxt - non-interactive version rendering into a text file
   unrooted    - draw unrooted circular trees
   
   If you use NJplot in a published work, please cite the following reference:
   
   Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
   biological sequence banks. Biochimie, 78, 364-369.
   
   WWW: http://pbil.univ-lyon1.fr/software/njplot.html
   
   PR:             ports/118438
   Submitted by:   Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
   
   Revision  Changes    Path
   1.97      +1 -0      ports/biology/Makefile
   1.1       +55 -0     ports/biology/njplot/Makefile (new)
   1.1       +3 -0      ports/biology/njplot/distinfo (new)
   1.1       +69 -0     ports/biology/njplot/files/patch-makefile (new)
   1.1       +17 -0     ports/biology/njplot/pkg-descr (new)
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