Date: Wed, 19 Jun 2002 22:47:23 +0100 From: Matthew Seaman <m.seaman@infracaninophile.co.uk> To: "Gestur A. Grjetarsson" <gestur@decode.is> Cc: questions@FreeBSD.ORG Subject: Re: probs running ncbi blast on freebsd? Message-ID: <20020619214723.GA87688@happy-idiot-talk.infracaninophi> In-Reply-To: <OFBC90D2F2.2FDBA298-ON00256BDD.0065B13B@decode.is> References: <OFBC90D2F2.2FDBA298-ON00256BDD.0065B13B@decode.is>
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On Wed, Jun 19, 2002 at 06:34:23PM +0000, Gestur A. Grjetarsson wrote: > I'm trying to run blastall on my freebsd box, it's a linux version of > blast, but I have the freebsd box setup with linux compatibility > everythings seems to work normally, but when trying to run blast, I get > error from kernel, it's like: > > 'ELF binary type "0" not known. > Abort trap' brandelf -t Linux blast > do you have any hints on what might be the problem and how to solve this? > is there a FreeBSD binary version available for ncbi blastall? Yup. There's a FreeBSD native version available. It's in ports: biology/ncbi-toolkit, or if you're allergic to compilers, packages are available from the usual places like ftp://ftp.${tld}.freebsd.org/pub/FreeBSD/ports/i386/packages-4-stable/biology/ncbi-toolkit-2001.12.20.tgz for most, but not all, values of ${tld}. Matthew -- Dr Matthew J Seaman MA, D.Phil. 26 The Paddocks Savill Way Tel: +44 1628 476614 Marlow Fax: +44 0870 0522645 Bucks., SL7 1TH UK To Unsubscribe: send mail to majordomo@FreeBSD.org with "unsubscribe freebsd-questions" in the body of the message
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