Date: Wed, 18 Apr 2007 09:48:52 -0300 (BRT) From: "P.BandieraPaiva" <paiva@unifesp.br> To: FreeBSD-gnats-submit@FreeBSD.org Cc: mauricio@arareko.net Subject: ports/111817: [PATCH] biology/py-biopython: update to 1.43 Message-ID: <200704181248.l3ICmqF6094152@kaya.epm.br> Resent-Message-ID: <200704181320.l3IDK2F7083593@freefall.freebsd.org>
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>Number: 111817 >Category: ports >Synopsis: [PATCH] biology/py-biopython: update to 1.43 >Confidential: no >Severity: non-critical >Priority: low >Responsible: freebsd-ports-bugs >State: open >Quarter: >Keywords: >Date-Required: >Class: update >Submitter-Id: current-users >Arrival-Date: Wed Apr 18 13:20:01 GMT 2007 >Closed-Date: >Last-Modified: >Originator: P.BandieraPaiva >Release: FreeBSD 6.2-RELEASE-p2 i386 >Organization: >Environment: System: FreeBSD kaya.epm.br 6.2-RELEASE-p2 FreeBSD 6.2-RELEASE-p2 #2: Fri Mar 9 08:45:53 BRT >Description: - Update to 1.43 Removed file(s): - pkg-plist Port maintainer (mauricio@arareko.net) is cc'd. Generated with FreeBSD Port Tools 0.77 >How-To-Repeat: >Fix: --- py24-biopython-1.43.patch begins here --- diff -ruN --exclude=CVS /usr/ports/biology/py-biopython/Makefile /home/paiva/src/py-biopython/Makefile --- /usr/ports/biology/py-biopython/Makefile Tue Oct 31 11:25:21 2006 +++ /home/paiva/src/py-biopython/Makefile Wed Apr 18 09:24:44 2007 @@ -1,12 +1,12 @@ -# New ports collection makefile for: py-biopython -# Date created: 28 July 2000 -# Whom: Johann Visagie <johann@egenetics.com> +# New ports collection makefile for: py-biopython +# Date created: 28 July 2000 +# Whom: Johann Visagie <johann@egenetics.com> # # $FreeBSD: ports/biology/py-biopython/Makefile,v 1.22 2006/10/31 13:25:21 miwi Exp $ # PORTNAME= biopython -PORTVERSION= 1.42 +PORTVERSION= 1.43 CATEGORIES= biology python MASTER_SITES= http://www.biopython.org/DIST/ PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} @@ -14,8 +14,7 @@ MAINTAINER= mauricio@arareko.net COMMENT= A collection of Python modules for bioinformatics -BUILD_DEPENDS= ${PYNUMERIC} \ - ${PYTHON_SITELIBDIR}/mx/TextTools/__init__.py:${PORTSDIR}/lang/py-mx-base +BUILD_DEPENDS= ${PYNUMERIC}:${PORTSDIR}/lang/py-mx-base RUN_DEPENDS= ${BUILD_DEPENDS} CONFLICTS= py*-martel-[0-9]* diff -ruN --exclude=CVS /usr/ports/biology/py-biopython/distinfo /home/paiva/src/py-biopython/distinfo --- /usr/ports/biology/py-biopython/distinfo Tue Oct 31 11:25:21 2006 +++ /home/paiva/src/py-biopython/distinfo Tue Apr 17 21:33:14 2007 @@ -1,3 +1,3 @@ -MD5 (biopython-1.42.tar.gz) = 6d9bf58d0fcfa5a3b2053ad419069ff3 -SHA256 (biopython-1.42.tar.gz) = ba4d00fdf7de67196ecba317dee09a14850b40596bd83d73e458c5f19fc9fc58 -SIZE (biopython-1.42.tar.gz) = 3933507 +MD5 (biopython-1.43.tar.gz) = 3c275b321bb1db7d8bda764913aaedcd +SHA256 (biopython-1.43.tar.gz) = eb424da9efddbf376c31660786ecb34ff893ea752bf7300f4a06d1b8c6ba175b +SIZE (biopython-1.43.tar.gz) = 3867907 diff -ruN --exclude=CVS /usr/ports/biology/py-biopython/pkg-plist /home/paiva/src/py-biopython/pkg-plist --- 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