Date: Sat, 9 Jan 2021 01:47:55 GMT From: pkg-fallout@FreeBSD.org To: danilo@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 121amd64-default][net/openmpi3] Failed for openmpi3-3.1.6 in lib-depends Message-ID: <202101090147.1091ltsW031768@beefy6.nyi.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: danilo@FreeBSD.org Last committer: danilo@FreeBSD.org Ident: $FreeBSD: head/net/openmpi3/Makefile 552500 2020-10-16 11:25:29Z danilo $ Log URL: http://beefy6.nyi.freebsd.org/data/121amd64-default/560826/logs/openmpi3-3.1.6.log Build URL: http://beefy6.nyi.freebsd.org/build.html?mastername=121amd64-default&build=560826 Log: =>> Building net/openmpi3 build started at Sat Jan 9 01:47:35 UTC 2021 port directory: /usr/ports/net/openmpi3 package name: openmpi3-3.1.6 building for: FreeBSD 121amd64-default-job-07 12.1-RELEASE-p12 FreeBSD 12.1-RELEASE-p12 amd64 maintained by: danilo@FreeBSD.org Makefile ident: $FreeBSD: head/net/openmpi3/Makefile 552500 2020-10-16 11:25:29Z danilo $ Poudriere version: 3.2.8-8-gaf08dbda Host OSVERSION: 1300121 Jail OSVERSION: 1201000 Job Id: 07 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1201000 UNAME_v=FreeBSD 12.1-RELEASE-p12 UNAME_r=12.1-RELEASE-p12 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-8-gaf08dbda MASTERMNT=/usr/local/poudriere/data/.m/121amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/121amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=121amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/121amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for openmpi3-3.1.6: DEBUG=off: Build with debugging support IPV6=on: IPv6 protocol support SLURM=on: Enable SLURM support TORQUE=off: Enable Torque support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- danilo@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --prefix=/usr/local/mpi/openmpi3 --mandir=/usr/local/mpi/openmpi3/man --program-prefix= --with-hwloc=external --with-libltdl --enable-mpi-fortran=usempi --enable-mpi-cxx --enable-cxx-exceptions --with-libevent=external --enable-mca-no-build=verbs,btl_openib,oob_ud --without-verbs --with-wrapper-ldflags=-Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9 ompi_cv_fortran_ignore_tkr_data=0 --disable-debug --enable-ipv6 --with-slurm --without-tm --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/net/openmpi3/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/openmpi3/work HOME=/wrkdirs/usr/ports/net/openmpi3/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/openmpi3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/net/openmpi3/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/openmpi3/work HOME=/wrkdirs/usr/ports/net/openmpi3/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/openmpi3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fn o-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local/mpi/openmpi3" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- MPIBASE=mpi MPIDIR=mpi/openmpi3 DEBUG="@comment " NO_DEBUG="" IPV6="" NO_IPV6="@comment " SLURM="" NO_SLURM="@comment " TORQUE="@comment " NO_TORQUE="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.0 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 DOCSDIR="share/doc/openmpi" EXAMPLESDIR="share/examples/openmpi" DATADIR="share/openmpi" WWWDIR="www/openmpi" ETCDIR="etc/openmpi" --End PLIST_SUB-- --SUB_LIST-- DEBUG="@comment " NO_DEBUG="" IPV6="" NO_IPV6="@comment " SLURM="" NO_SLURM="@comment " TORQUE="@comment " NO_TORQUE="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/openmpi DOCSDIR=/usr/local/share/doc/openmpi EXAMPLESDIR=/usr/local/share/examples/openmpi WWWDIR=/usr/local/www/openmpi ETCDIR=/usr/local/etc/openmpi --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: x86_64-unknown-freebsd12.1 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: x86_64-unknown-freebsd12.1 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 8.0.1 (tags/RELEASE_801/final 366581) (based on LLVM 8.0.1) Target: x86_64-unknown-freebsd12.1 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=amd64 OPSYS=FreeBSD _OSRELEASE=12.1-RELEASE-p12 OSREL=12.1 OSVERSION=1201000 PYTHONBASE=/usr/local HAVE_COMPAT_IA32_KERN=YES CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> openmpi3-3.1.6 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.16.1.txz [121amd64-default-job-07] Installing pkg-1.16.1... [121amd64-default-job-07] Extracting pkg-1.16.1: .......... done ===> openmpi3-3.1.6 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of openmpi3-3.1.6 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by openmpi3-3.1.6 for building =========================================================================== =======================<phase: checksum >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by openmpi3-3.1.6 for building => SHA256 Checksum OK for openmpi-3.1.6.tar.bz2. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by openmpi3-3.1.6 for building ===> Extracting for openmpi3-3.1.6 => SHA256 Checksum OK for openmpi-3.1.6.tar.bz2. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for openmpi3-3.1.6 ===> Applying FreeBSD patches for openmpi3-3.1.6 from /usr/ports/net/openmpi3/files =========================================================================== =======================<phase: build-depends >============================ ===> openmpi3-3.1.6 depends on executable: gfortran9 - not found ===> Installing existing package /packages/All/gcc9-9.3.0_1.txz [121amd64-default-job-07] Installing gcc9-9.3.0_1... [121amd64-default-job-07] `-- Installing binutils-2.33.1_4,1... [121amd64-default-job-07] | `-- Installing gettext-runtime-0.21... [121amd64-default-job-07] | | `-- Installing indexinfo-0.3.1... [121amd64-default-job-07] | | `-- Extracting indexinfo-0.3.1: .... done [121amd64-default-job-07] | `-- Extracting gettext-runtime-0.21: .......... done [121amd64-default-job-07] `-- Extracting binutils-2.33.1_4,1: .......... done [121amd64-default-job-07] `-- Installing gmp-6.2.1... [121amd64-default-job-07] `-- Extracting gmp-6.2.1: .......... done [121amd64-default-job-07] `-- Installing mpc-1.1.0_2... [121amd64-default-job-07] | `-- Installing mpfr-4.1.0... [121amd64-default-job-07] | `-- Extracting mpfr-4.1.0: .......... done [121amd64-default-job-07] `-- Extracting mpc-1.1.0_2: ......... done [121amd64-default-job-07] Extracting gcc9-9.3.0_1: .......... done ===== Message from gcc9-9.3.0_1: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc9 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===> openmpi3-3.1.6 depends on executable: gfortran9 - found ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on package: gmake>=4.3 - not found ===> Installing existing package /packages/All/gmake-4.3_2.txz [121amd64-default-job-07] Installing gmake-4.3_2... [121amd64-default-job-07] Extracting gmake-4.3_2: .......... done ===> openmpi3-3.1.6 depends on package: gmake>=4.3 - found ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on package: pkgconf>=1.3.0_1 - not found ===> Installing existing package /packages/All/pkgconf-1.7.3,1.txz [121amd64-default-job-07] Installing pkgconf-1.7.3,1... [121amd64-default-job-07] Extracting pkgconf-1.7.3,1: .......... done ===> openmpi3-3.1.6 depends on package: pkgconf>=1.3.0_1 - found ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on file: /usr/local/bin/as - found ===> openmpi3-3.1.6 depends on package: perl5>=5.32.r0<5.33 - not found ===> Installing existing package /packages/All/perl5-5.32.0_1.txz [121amd64-default-job-07] Installing perl5-5.32.0_1... [121amd64-default-job-07] Extracting perl5-5.32.0_1: .......... done ===> openmpi3-3.1.6 depends on package: perl5>=5.32.r0<5.33 - found ===> Returning to build of openmpi3-3.1.6 =========================================================================== =======================<phase: lib-depends >============================ ===> openmpi3-3.1.6 depends on shared library: libhwloc.so - not found ===> Installing existing package /packages/All/hwloc-1.11.13.txz [121amd64-default-job-07] Installing hwloc-1.11.13... [121amd64-default-job-07] `-- Installing libpciaccess-0.16... [121amd64-default-job-07] | `-- Installing pciids-20201127... [121amd64-default-job-07] | `-- Extracting pciids-20201127: ..... done [121amd64-default-job-07] `-- Extracting libpciaccess-0.16: ......... done [121amd64-default-job-07] `-- Installing libxml2-2.9.10_2... [121amd64-default-job-07] `-- Extracting libxml2-2.9.10_2: .......... done [121amd64-default-job-07] Extracting hwloc-1.11.13: .......... done ===> openmpi3-3.1.6 depends on shared library: libhwloc.so - found (/usr/local/lib/libhwloc.so) ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on shared library: libltdl.so - not found ===> Installing existing package /packages/All/libltdl-2.4.6.txz [121amd64-default-job-07] Installing libltdl-2.4.6... [121amd64-default-job-07] Extracting libltdl-2.4.6: .......... done ===> openmpi3-3.1.6 depends on shared library: libltdl.so - found (/usr/local/lib/libltdl.so) ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on shared library: libevent.so - not found ===> Installing existing package /packages/All/libevent-2.1.12.txz [121amd64-default-job-07] Installing libevent-2.1.12... [121amd64-default-job-07] Extracting libevent-2.1.12: .......... done ===> openmpi3-3.1.6 depends on shared library: libevent.so - found (/usr/local/lib/libevent.so) ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on shared library: libmunge.so - not found ===> Installing existing package /packages/All/munge-0.5.14_1.txz [121amd64-default-job-07] Installing munge-0.5.14_1... [121amd64-default-job-07] Extracting munge-0.5.14_1: ......... done ===> openmpi3-3.1.6 depends on shared library: libmunge.so - found (/usr/local/lib/libmunge.so) ===> Returning to build of openmpi3-3.1.6 ===> openmpi3-3.1.6 depends on shared library: libslurm.so - not found ===> Installing existing package /packages/All/slurm-wlm-20.02.1_5.txz [121amd64-default-job-07] Installing slurm-wlm-20.02.1_5... [121amd64-default-job-07] `-- Installing hdf-szip-2.1.1... [121amd64-default-job-07] `-- Extracting hdf-szip-2.1.1: .......... done [121amd64-default-job-07] `-- Installing hdf5-1.10.6,1... [121amd64-default-job-07] `-- Extracting hdf5-1.10.6,1: .......... done [121amd64-default-job-07] `-- Installing hwloc2-2.3.0... pkg-static: hwloc2-2.3.0 conflicts with hwloc-1.11.13 (installs files into the same place). Problematic file: /usr/local/bin/hwloc-annotate Failed to install the following 1 package(s): /packages/All/slurm-wlm-20.02.1_5.txz *** Error code 1 Stop. make: stopped in /usr/ports/net/openmpi3
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