Date: Tue, 21 Jun 2016 09:05:06 +0000 (UTC) From: Dmitry Marakasov <amdmi3@FreeBSD.org> To: ports-committers@freebsd.org, svn-ports-all@freebsd.org, svn-ports-head@freebsd.org Subject: svn commit: r417195 - in head/biology/wise: . files Message-ID: <201606210905.u5L956rs076438@repo.freebsd.org>
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Author: amdmi3 Date: Tue Jun 21 09:05:06 2016 New Revision: 417195 URL: https://svnweb.freebsd.org/changeset/ports/417195 Log: - Switch to options helpers - Regenerate patches with `make makepatch` Modified: head/biology/wise/Makefile head/biology/wise/files/patch-src_models_phasemodel.c Modified: head/biology/wise/Makefile ============================================================================== --- head/biology/wise/Makefile Tue Jun 21 08:36:56 2016 (r417194) +++ head/biology/wise/Makefile Tue Jun 21 09:05:06 2016 (r417195) @@ -10,8 +10,6 @@ DISTNAME= ${PORTNAME}${PORTVERSION} MAINTAINER= ports@FreeBSD.org COMMENT= Intelligent algorithms for DNA searches -OPTIONS_DEFINE= DOCS EXAMPLES - BUILD_WRKSRC= ${WRKSRC}/src USES= pkgconfig @@ -20,10 +18,6 @@ MAKEFILE= makefile SUB_FILES= pkg-message -PORTDOCS= * -PORTEXAMPLES= * -PLIST_FILES= ${BINFILES:S,^,bin/,} ${DATAFILES:S,^,%%DATADIR%%/,} - # # Actually want an 'ALL_TARGET = all perl' which then requires # 'USE_PERL5= yes' but the perl sub-build is currently broken. @@ -42,6 +36,12 @@ DATAFILES= BLOSUM30.bla BLOSUM45.bla BLO human.stats idenity.bla methods pb.gf pombe.gf tm.pri \ wise.2 wise.per worm.gf +PORTDOCS= * +PORTEXAMPLES= * +PLIST_FILES= ${BINFILES:S,^,bin/,} ${DATAFILES:S,^,%%DATADIR%%/,} + +OPTIONS_DEFINE= DOCS EXAMPLES + post-patch: @${FIND} ${BUILD_WRKSRC} -name "makefile" | ${XARGS} \ ${REINPLACE_CMD} -e \ @@ -60,8 +60,12 @@ do-install: @${MKDIR} ${STAGEDIR}${DATADIR} (cd ${WRKSRC}/wisecfg && ${INSTALL_DATA} ${DATAFILES} \ ${STAGEDIR}${DATADIR}) + +do-install-DOCS-on: @${MKDIR} ${STAGEDIR}${DOCSDIR} (cd ${WRKSRC}/docs && ${COPYTREE_SHARE} . ${STAGEDIR}${DOCSDIR}) + +do-install-EXAMPLES-on: @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} (cd ${WRKSRC}/test_data && ${COPYTREE_SHARE} . ${STAGEDIR}${EXAMPLESDIR}) Modified: head/biology/wise/files/patch-src_models_phasemodel.c ============================================================================== --- head/biology/wise/files/patch-src_models_phasemodel.c Tue Jun 21 08:36:56 2016 (r417194) +++ head/biology/wise/files/patch-src_models_phasemodel.c Tue Jun 21 09:05:06 2016 (r417195) @@ -1,4 +1,4 @@ ---- src/models/phasemodel.c.orig 2007-09-08 08:05:32.000000000 +0000 +--- src/models/phasemodel.c.orig 2007-09-08 08:05:32 UTC +++ src/models/phasemodel.c @@ -3,6 +3,10 @@ extern "C" { #endif
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