Date: Sun, 5 Oct 2014 04:03:34 GMT From: pkg-fallout@FreeBSD.org To: wen@FreeBSD.org Cc: pkg-fallout@FreeBSD.org Subject: [package - 91amd64-default-ssp][devel/py-tables] Failed for py27-tables-3.0.0_4 in configure Message-ID: <201410050403.s9543YoM046366@beefy4.isc.freebsd.org>
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You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: wen@FreeBSD.org Last committer: gerald@FreeBSD.org Ident: $FreeBSD: head/devel/py-tables/Makefile 367888 2014-09-10 20:50:31Z gerald $ Log URL: http://beefy4.isc.freebsd.org/data/91amd64-default-ssp/2014-10-04_20h26m52s/logs/py27-tables-3.0.0_4.log Build URL: http://beefy4.isc.freebsd.org/build.html?mastername=91amd64-default-ssp&build=2014-10-04_20h26m52s Log: ====>> Building devel/py-tables build started at Sun Oct 5 04:03:10 UTC 2014 port directory: /usr/ports/devel/py-tables building for: FreeBSD pkg.FreeBSD.org 9.1-RELEASE-p13 FreeBSD 9.1-RELEASE-p13 amd64 maintained by: wen@FreeBSD.org Makefile ident: $FreeBSD: head/devel/py-tables/Makefile 367888 2014-09-10 20:50:31Z gerald $ Poudriere version: 3.1-pre Host OSVERSION: 1100027 Jail OSVERSION: 901000 ---Begin Environment--- OSVERSION=901000 UNAME_v=FreeBSD 9.1-RELEASE-p13 UNAME_r=9.1-RELEASE-p13 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 SAVED_TERM= MASTERMNT=/usr/local/poudriere/data/.m/91amd64-default-ssp/ref PKG_EXT=txz FORCE_PACKAGE=yes PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin POUDRIERE_BUILD_TYPE=bulk PKGNG=1 PKGNAME=py27-tables-3.0.0_4 PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f PKG_ADD=/usr/local/sbin/pkg-static add OLDPWD=/root PWD=/usr/local/poudriere/data/.m/91amd64-default-ssp/ref/.p/pool MASTERNAME=91amd64-default-ssp USER=root HOME=/root POUDRIERE_VERSION=3.1-pre LOCALBASE=/usr/local PACKAGE_BUILDING=yes PKG_VERSION=/.p/pkg-static version PKG_BIN=/usr/local/sbin/pkg-static ---End Environment--- ---Begin OPTIONS List--- ===> The following configuration options are available for py27-tables-3.0.0_4: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples PYREX=off: Use code generated by Pyrex to build ===> Use 'make config' to modify these settings ---End OPTIONS List--- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" PYTHON="/usr/local/bin/python2.7" SHELL=/bin/sh CONFIG_SHELL=/bin/sh PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin CCACHE_DIR="/root/.ccache" --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/devel/py-tables/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/devel/py-tables/work HOME=/wrkdirs/usr/ports/devel/py-tables/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector -fno-strict-aliasing" MANPREFIX="/usr/local" PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT=" install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 0644" BSD_INSTALL_MAN="install -o root -g wheel -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python2.7 PYTHON_LIBDIR=lib/python2.7 PYTHON_PLATFORM=freebsd9 PYTHON_SITELIBDIR=lib/python2.7/site-packages PYTHON_VERSION=python2.7 PYTHON_VER=2.7 OSREL=9.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local PORTDOCS="" PORTEXAMPLES="" LIB32DIR=lib DOCSDIR="share/doc/tables" EXAMPLESDIR="share/examples/tables" DATADIR="share/tables" WWWDIR="www/tables" ETCDIR="etc/tables" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/tables DOCSDIR=/usr/local/share/doc/tables EXAMPLESDIR=/usr/local/share/examples/tables WWWDIR=/usr/local/www/tables ETCDIR=/usr/local/etc/tables --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs WITH_CCACHE_BUILD=yes CCACHE_DIR=/root/.ccache USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles #### /usr/local/etc/poudriere.d/make.conf #### WITH_PKGNG=yes #WITH_PKGNG=devel #### /usr/local/etc/poudriere.d/ssp-make.conf #### WITH_SSP_PORTS=yes DISABLE_MAKE_JOBS=poudriere ---End make.conf--- =======================<phase: check-sanity >============================ ===> License BSD3CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> py27-tables-3.0.0_4 depends on file: /usr/local/sbin/pkg - not found ===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg ===> Installing existing package /packages/All/pkg-1.3.8_2.txz [pkg.FreeBSD.org] Installing pkg-1.3.8_2... done Message for pkg-1.3.8_2: If you are upgrading from the old package format, first run: # pkg2ng ===> Returning to build of py27-tables-3.0.0_4 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py27-tables-3.0.0_4 for building =========================================================================== =======================<phase: checksum >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py27-tables-3.0.0_4 for building => SHA256 Checksum OK for tables-3.0.0.tar.gz. => SHA256 Checksum OK for pytablesmanual-3.0.0.pdf. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py27-tables-3.0.0_4 for building ===> Extracting for py27-tables-3.0.0_4 => SHA256 Checksum OK for tables-3.0.0.tar.gz. => SHA256 Checksum OK for pytablesmanual-3.0.0.pdf. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for py27-tables-3.0.0_4 ===> Applying FreeBSD patches for py27-tables-3.0.0_4 =========================================================================== =======================<phase: build-depends >============================ ===> py27-tables-3.0.0_4 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - not found ===> Verifying install for /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py in /usr/ports/math/py-numpy ===> Installing existing package /packages/All/py27-numpy-1.8.1_4,1.txz [pkg.FreeBSD.org] Installing indexinfo-0.2... done [pkg.FreeBSD.org] Installing libiconv-1.14_4... done [pkg.FreeBSD.org] Installing gettext-0.18.3.1_1... done [pkg.FreeBSD.org] Installing binutils-2.24_1... done [pkg.FreeBSD.org] Installing gcc-ecj-4.5... done [pkg.FreeBSD.org] Installing gmp-5.1.3_2... done [pkg.FreeBSD.org] Installing mpfr-3.1.2_2... done [pkg.FreeBSD.org] Installing mpc-1.0.2_1... done [pkg.FreeBSD.org] Installing gcc-4.8.3_1... done [pkg.FreeBSD.org] Installing blas-3.4.2_3... done [pkg.FreeBSD.org] Installing lapack-3.4.2_3... done [pkg.FreeBSD.org] Installing python27-2.7.8_5... done [pkg.FreeBSD.org] Installing py27-setuptools27-5.5.1... done [pkg.FreeBSD.org] Installing py27-nose-1.3.3... done [pkg.FreeBSD.org] Installing suitesparse-4.0.2_4... done [pkg.FreeBSD.org] Installing py27-numpy-1.8.1_4,1... done Message for gcc-4.8.3_1: To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc48 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. Message for python27-2.7.8_5: ===================================================================== Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: bsddb databases/py-bsddb gdbm databases/py-gdbm sqlite3 databases/py-sqlite3 tkinter x11-toolkits/py-tkinter ===================================================================== ===> Returning to build of py27-tables-3.0.0_4 ===> py27-tables-3.0.0_4 depends on file: /usr/local/bin/cython - not found ===> Verifying install for /usr/local/bin/cython in /usr/ports/lang/cython ===> Installing existing package /packages/All/cython-0.21.txz [pkg.FreeBSD.org] Installing cython-0.21... done ===> Returning to build of py27-tables-3.0.0_4 ===> py27-tables-3.0.0_4 depends on package: py27-numexpr>=1.4.1 - not found ===> Verifying install for py27-numexpr>=1.4.1 in /usr/ports/math/py-numexpr ===> Installing existing package /packages/All/py27-numexpr-2.2.2_3.txz [pkg.FreeBSD.org] Installing py27-numexpr-2.2.2_3... done ===> Returning to build of py27-tables-3.0.0_4 ===> py27-tables-3.0.0_4 depends on package: py27-setuptools27>0 - found ===> py27-tables-3.0.0_4 depends on file: /usr/local/bin/python2.7 - found ===> py27-tables-3.0.0_4 depends on file: /usr/local/bin/ccache - not found ===> Verifying install for /usr/local/bin/ccache in /usr/ports/devel/ccache ===> Installing existing package /packages/All/ccache-3.1.9_8.txz [pkg.FreeBSD.org] Installing ccache-3.1.9_8... done Create compiler links... create symlink for cc create symlink for cc (world) create symlink for c++ create symlink for c++ (world) create symlink for CC create symlink for CC (world) create symlink for gcc create symlink for gcc (world) create symlink for g++ create symlink for g++ (world) create symlink for gcc48 create symlink for gcc48 (world) create symlink for g++48 create symlink for g++48 (world) Message for ccache-3.1.9_8: NOTE: Please read /usr/local/share/doc/ccache/ccache-howto-freebsd.txt for information on using ccache with FreeBSD ports and src. ===> Returning to build of py27-tables-3.0.0_4 =========================================================================== =======================<phase: lib-depends >============================ ===> py27-tables-3.0.0_4 depends on shared library: libhdf5.so - not found ===> Verifying for libhdf5.so in /usr/ports/science/hdf5 ===> Installing existing package /packages/All/hdf5-1.8.13_1.txz [pkg.FreeBSD.org] Installing hdf5-1.8.13_1... done ===> Returning to build of py27-tables-3.0.0_4 ===> py27-tables-3.0.0_4 depends on shared library: liblzo2.so - not found ===> Verifying for liblzo2.so in /usr/ports/archivers/lzo2 ===> Installing existing package /packages/All/lzo2-2.08.txz [pkg.FreeBSD.org] Installing lzo2-2.08... done ===> Returning to build of py27-tables-3.0.0_4 ===> py27-tables-3.0.0_4 depends on shared library: libucl.so - not found ===> Verifying for libucl.so in /usr/ports/archivers/ucl ===> Installing existing package /packages/All/ucl-1.03_4.txz [pkg.FreeBSD.org] Installing ucl-1.03_4... done ===> Returning to build of py27-tables-3.0.0_4 =========================================================================== =======================<phase: configure >============================ ===> Configuring for py27-tables-3.0.0_4 * Using Python 2.7.8 (default, Sep 21 2014, 14:35:39) * Found numpy 1.8.1 package installed. * Found numexpr 2.2.2 package installed. . ERROR:: You need Cython 0.13 or greater to compile PyTables! *** [do-configure] Error code 1 Stop in /usr/ports/devel/py-tables.
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