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Date:      Thu, 15 May 2014 10:40:26 GMT
From:      pkg-fallout-builder@FreeBSD.org
To:        pkg-fallout@FreeBSD.org
Subject:   [REL - 91i386-default][science/minc2] Failed for minc2-2.0.18_2, 1 in build
Message-ID:  <201405151040.s4FAeQJ4023056@beefy1.isc.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     ports@FreeBSD.org
Last committer: sunpoet@FreeBSD.org
Ident:          $FreeBSD: head/science/minc2/Makefile 352855 2014-05-03 03:17:19Z sunpoet $
Log URL:        http://beefy1.isc.freebsd.org/bulk/91i386-default/2014-05-15_00h01m35s/logs/minc2-2.0.18_2,1.log
Build URL:      http://beefy1.isc.freebsd.org/bulk/91i386-default/2014-05-15_00h01m35s
Log:

====>> Building science/minc2
build started at Thu May 15 10:40:15 UTC 2014
port directory: /usr/ports/science/minc2
building for: FreeBSD 91i386-default-job-18 9.1-RELEASE-p11 FreeBSD 9.1-RELEASE-p11 i386
maintained by: ports@FreeBSD.org
Makefile ident:      $FreeBSD: head/science/minc2/Makefile 352855 2014-05-03 03:17:19Z sunpoet $
Poudriere version: 3.1-pre
Host OSVERSION: 1100013
Jail OSVERSION: 901000

---Begin Environment---
UNAME_m=i386
UNAME_p=i386
OSVERSION=901000
UNAME_v=FreeBSD 9.1-RELEASE-p11
UNAME_r=9.1-RELEASE-p11
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/build/91i386-default/ref
PKG_EXT=txz
tpid=14911
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=minc2-2.0.18_2,1
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/usr/local/poudriere/data/build/91i386-default/ref/poudriere/rdeps
PWD=/usr/local/poudriere/data/build/91i386-default/ref/poudriere/pool
MASTERNAME=91i386-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/poudriere/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--
--enable-shared=yes --enable-static=yes --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh   LIBTOOL=/usr/local/bin/libtool  LIBTOOLIZE=/usr/local/bin/libtoolize  LIBTOOL_LIBEXECDIR=/usr/local/libexec/libtool  LIBTOOL_SHAREDIR=/usr/local/share/libtool  LIBTOOL_M4=/usr/local/share/aclocal/libtool.m4  LTMAIN=/usr/local/share/libtool/config/ltmain.sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
TMPDIR="/tmp" SHELL=/bin/sh NO_LINT=YES   LIBTOOL=/usr/local/bin/libtool  LIBTOOLIZE=/usr/local/bin/libtoolize  LIBTOOL_LIBEXECDIR=/usr/local/libexec/libtool  LIBTOOL_SHAREDIR=/usr/local/share/libtool  LIBTOOL_M4=/usr/local/share/aclocal/libtool.m4  LTMAIN=/usr/local/share/libtool/config/ltmain.sh PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=" -I/usr/local/include -DH5_USE_16_API"  LDFLAGS=" -L/usr/local/lib -pthread"  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--PLIST_SUB--
OSREL=9.1
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
PORTDATA=""
LIB32DIR=lib
DOCSDIR="share/doc/minc"
EXAMPLESDIR="share/examples/minc"
DATADIR="share/minc"
WWWDIR="www/minc"
ETCDIR="etc/minc"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/minc
DOCSDIR=/usr/local/share/doc/minc
EXAMPLESDIR=/usr/local/share/examples/minc
WWWDIR=/usr/local/www/minc
ETCDIR=/usr/local/etc/minc
--End SUB_LIST--

---Begin make.conf---
ARCH=i386
MACHINE=i386
MACHINE_ARCH=i386
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
===>  Cleaning for minc2-2.0.18_2,1
=======================<phase: check-sanity   >============================
===>  License BSD accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   minc2-2.0.18_2,1 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.2.7_2.txz
Installing pkg-1.2.7_2... done
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of minc2-2.0.18_2,1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.0.18_2,1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.0.18_2,1 for building
=> SHA256 Checksum OK for minc-2.0.18.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD accepted by the user
===> Fetching all distfiles required by minc2-2.0.18_2,1 for building
===>  Extracting for minc2-2.0.18_2,1
=> SHA256 Checksum OK for minc-2.0.18.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for minc2-2.0.18_2,1
===>  Applying FreeBSD patches for minc2-2.0.18_2,1
===========================================================================
=======================<phase: build-depends  >============================
===>   minc2-2.0.18_2,1 depends on package: libtool>=2.4 - not found
pkg-static: No package(s) matching libtool
===>    Verifying install for libtool>=2.4 in /usr/ports/devel/libtool
===>   Installing existing package /packages/All/libtool-2.4.2_3.txz
Installing libtool-2.4.2_3... done
===>   Returning to build of minc2-2.0.18_2,1
===========================================================================
=======================<phase: lib-depends    >============================
===>   minc2-2.0.18_2,1 depends on shared library: libnetcdf.so - not found
===>    Verifying for libnetcdf.so in /usr/ports/science/netcdf
===>   Installing existing package /packages/All/netcdf-4.3.2.txz
Installing netcdf-4.3.2...Installing curl-7.36.0...Installing ca_root_nss-3.16... done
 done
Installing hdf-szip-2.1_2... done
Installing hdf5-1.8.12... done
 done
===>   Returning to build of minc2-2.0.18_2,1
===>   minc2-2.0.18_2,1 depends on shared library: libhdf5.so - found
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for minc2-2.0.18_2,1
configure: loading site script /usr/ports/Templates/config.site
checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... (cached) /bin/mkdir -p
checking for gawk... (cached) /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking for a BSD-compatible install... /usr/bin/install -c -o root -g wheel
checking whether ln -s works... yes
checking whether make sets $(MAKE)... (cached) yes
checking for style of include used by make... GNU
checking for gcc... cc
checking for C compiler default output file name... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ISO C89... none needed
checking dependency style of cc... gcc3
checking whether cc understands -c and -o together... yes
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... no
checking whether  accepts -g... no
checking for flex... flex
checking lex output file root... lex.yy
checking lex library... -lfl
checking whether yytext is a pointer... yes
checking for bison... no
checking for byacc... byacc
checking whether time.h and sys/time.h may both be included... yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking how to run the C preprocessor... cpp
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for ANSI C header files... (cached) yes
checking for sys/types.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for memory.h... (cached) yes
checking for strings.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/time.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for sys/wait.h... (cached) yes
checking for unistd.h... (cached) yes
checking for fcntl.h... (cached) yes
checking for pwd.h... (cached) yes
checking for float.h... (cached) yes
checking values.h usability... no
checking values.h presence... no
checking for values.h... no
checking for int32_t... (cached) yes
checking for int16_t... (cached) yes
checking build system type... i386-portbld-freebsd9.1
checking host system type... i386-portbld-freebsd9.1
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... (cached) /usr/bin/fgrep
checking for ld used by cc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking the maximum length of command line arguments... (cached) 262144
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... no
checking for /usr/bin/ld option to reload object files... -r
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for ar... ar
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from cc object... ok
checking for dlfcn.h... (cached) yes
checking for g77... no
checking for xlf... no
checking for f77... no
checking for frt... no
checking for pgf77... no
checking for cf77... no
checking for fort77... no
checking for fl32... no
checking for af77... no
checking for xlf90... no
checking for f90... no
checking for pgf90... no
checking for pghpf... no
checking for epcf90... no
checking for gfortran... no
checking for g95... no
checking for xlf95... no
checking for f95... no
checking for fort... no
checking for ifort... no
checking for ifc... no
checking for efc... no
checking for pgf95... no
checking for lf95... no
checking for ftn... no
checking whether we are using the GNU Fortran 77 compiler... (cached) no
checking whether  accepts -g... (cached) no
checking for objdir... .libs
checking if cc supports -fno-rtti -fno-exceptions... no
checking for cc option to produce PIC... -fPIC -DPIC
checking if cc PIC flag -fPIC -DPIC works... yes
checking if cc static flag -static works... yes
checking if cc supports -c -o file.o... yes
checking if cc supports -c -o file.o... (cached) yes
checking whether the cc linker (/usr/bin/ld) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... freebsd9.1 ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for library m... yes
checking for library netcdf... yes
checking for library z... yes
checking for library hdf5... yes
checking for strdup... (cached) yes
checking for mkstemp... (cached) yes
checking for tempnam... yes
checking for tmpnam... yes
checking for getpwnam... yes
checking for select... (cached) yes
checking for strerror... (cached) yes
checking for sysconf... (cached) yes
checking for pid_t... (cached) yes
checking for vfork.h... (cached) no
checking for fork... (cached) yes
checking for vfork... (cached) yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for system... yes
checking for popen... yes
configure: creating ./config.status
config.status: creating Makefile
config.status: creating epm-header
config.status: creating doc/Makefile
config.status: creating testdir/Makefile
config.status: creating libsrc2/test/Makefile
config.status: creating volume_io/Makefile
config.status: creating volume_io/Documentation/Makefile
config.status: creating volume_io/Testing/Makefile
config.status: creating progs/xfm/xfmflip
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
===========================================================================
=======================<phase: build          >============================
===>  Building for minc2-2.0.18_2,1
/usr/bin/make  all-recursive
Making all in .
depbase=`echo libsrc/ParseArgv.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh /usr/local/bin/libtool --tag=CC    --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include  -I./volume_io/Include  -I./progs/Proglib  -I./conversion/Acr_nema -I./libsrc2   -I/usr/local/include -DH5_USE_16_API  -O2 -pipe -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF $depbase.Tpo -c -o libsrc/ParseArgv.lo libsrc/ParseArgv.c && mv -f $depbase.Tpo $depbase.Plo
libtool: compile:  cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -DH5_USE_16_API -O2 -pipe -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF libsrc/.deps/ParseArgv.Tpo -c libsrc/ParseArgv.c  -fPIC -DPIC -o libsrc/.libs/ParseArgv.o
libtool: compile:  cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -DH5_USE_16_API -O2 -pipe -fno-strict-aliasing -MT libsrc/ParseArgv.lo -MD -MP -MF libsrc/.deps/ParseArgv.Tpo -c libsrc/ParseArgv.c -o libsrc/ParseArgv.o >/dev/null 2>&1
depbase=`echo libsrc/dim_conversion.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh /usr/local/bin/libtool --tag=CC    --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include  -I./volume_io/Include  -I./progs/Proglib  -I./conversion/Acr_nema -I./libsrc2   -I/usr/local/include -DH5_USE_16_API  -O2 -pipe -fno-strict-aliasing -MT libsrc/dim_conversion.lo -MD -MP -MF $depbase.Tpo -c -o libsrc/dim_conversion.lo libsrc/dim_conversion.c && mv -f $depbase.Tpo $depbase.Plo
libtool: compile:  cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -DH5_USE_16_API -O2 -pipe -fno-strict-aliasing -MT libsrc/dim_conversion.lo -MD -MP -MF libsrc/.deps/dim_conversion.Tpo -c libsrc/dim_conversion.c  -fPIC -DPIC -o libsrc/.libs/dim_conversion.o
libtool: compile:  cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -DH5_USE_16_API -O2 -pipe -fno-strict-aliasing -MT libsrc/dim_conversion.lo -MD -MP -MF libsrc/.deps/dim_conversion.Tpo -c libsrc/dim_conversion.c -o libsrc/dim_conversion.o >/dev/null 2>&1
depbase=`echo libsrc/image_conversion.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`; /bin/sh /usr/local/bin/libtool --tag=CC    --mode=compile cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include  -I./volume_io/Include  -I./progs/Proglib  -I./conversion/Acr_nema -I./libsrc2   -I/usr/local/include -DH5_USE_16_API  -O2 -pipe -fno-strict-aliasing -MT libsrc/image_conversion.lo -MD -MP -MF $depbase.Tpo -c -o libsrc/image_conversion.lo libsrc/image_conversion.c && mv -f $depbase.Tpo $depbase.Plo
libtool: compile:  cc -DHAVE_CONFIG_H -I. -I./libsrc -I./volume_io/Include -I./volume_io/Include -I./progs/Proglib -I./conversion/Acr_nema -I./libsrc2 -I/usr/local/include -DH5_USE_16_API -O2 -pipe -fno-strict-aliasing -MT libsrc/image_conversion.lo -MD -MP -MF libsrc/.deps/image_conversion.Tpo -c libsrc/image_conversion.c  -fPIC -DPIC -o libsrc/.libs/image_conversion.o
libsrc/image_conversion.c: In function 'miicv_create':
libsrc/image_conversion.c:219: error: 'MAX_NC_OPEN' undeclared (first use in this function)
libsrc/image_conversion.c:219: error: (Each undeclared identifier is reported only once
libsrc/image_conversion.c:219: error: for each function it appears in.)
*** [libsrc/image_conversion.lo] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/minc-2.0.18.
*** [all-recursive] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/minc-2.0.18.
*** [all] Error code 1

Stop in /wrkdirs/usr/ports/science/minc2/work/minc-2.0.18.
*** [do-build] Error code 1

Stop in /usr/ports/science/minc2.
===>  Cleaning for minc2-2.0.18_2,1



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