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Date:      Thu, 4 Mar 2021 02:15:06 GMT
From:      pkg-fallout@FreeBSD.org
To:        bofh@FreeBSD.org
Cc:        pkg-fallout@FreeBSD.org
Subject:   [package - 130releng-amd64-quarterly][biology/seaview] Failed for seaview-5.0.4, 1 in build
Message-ID:  <202103040215.1242F6Ub029404@beefy14.nyi.freebsd.org>

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You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     bofh@FreeBSD.org
Last committer: bofh@FreeBSD.org
Ident:          $FreeBSD: branches/2021Q1/biology/seaview/Makefile 539893 2020-06-22 17:34:44Z bofh $
Log URL:        http://beefy14.nyi.freebsd.org/data/130releng-amd64-quarterly/567285/logs/seaview-5.0.4,1.log
Build URL:      http://beefy14.nyi.freebsd.org/build.html?mastername=130releng-amd64-quarterly&build=567285
Log:

=>> Building biology/seaview
build started at Thu Mar  4 02:14:44 UTC 2021
port directory: /usr/ports/biology/seaview
package name: seaview-5.0.4,1
building for: FreeBSD 130releng-amd64-quarterly-job-14 13.0-BETA4 FreeBSD 13.0-BETA4 1300139 amd64
maintained by: bofh@FreeBSD.org
Makefile ident:      $FreeBSD: branches/2021Q1/biology/seaview/Makefile 539893 2020-06-22 17:34:44Z bofh $
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bofh@FreeBSD.org
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--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seaview/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seaview/work  HOME=/wrkdirs/usr/ports/biology/seaview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seaview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
HELPFILE='-DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\"'  PHYMLNAME='-DPHYMLNAME=\"phyml\"'  IFLTK='-I/usr/local/include'  LFLTK='-L/usr/local/lib'  USE_XFT='-DUSE_XFT'  OPT="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing " XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seaview/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seaview/work  HOME=/wrkdirs/usr/ports/biology/seaview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seaview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL
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OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/seaview"  EXAMPLESDIR="share/examples/seaview"  DATADIR="share/seaview"  WWWDIR="www/seaview"  ETCDIR="etc/seaview"
--End PLIST_SUB--

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PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/seaview DOCSDIR=/usr/local/share/doc/seaview EXAMPLESDIR=/usr/local/share/examples/seaview  WWWDIR=/usr/local/www/seaview ETCDIR=/usr/local/etc/seaview
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#### /usr/local/etc/poudriere.d/make.conf ####
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--End resource limits--
=======================<phase: check-sanity   >============================
===>  License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   seaview-5.0.4,1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.16.3.txz
[130releng-amd64-quarterly-job-14] Installing pkg-1.16.3...
[130releng-amd64-quarterly-job-14] Extracting pkg-1.16.3: .......... done
===>   seaview-5.0.4,1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of seaview-5.0.4,1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
=> SHA256 Checksum OK for seaview_5.0.4.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by seaview-5.0.4,1 for building
===>  Extracting for seaview-5.0.4,1
=> SHA256 Checksum OK for seaview_5.0.4.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for seaview-5.0.4,1
/usr/bin/sed -i.bak -e  's|^\(CC\) |#\1 | ; s|-ldl || ;  s|^\(CXX\) |#\1 |' /wrkdirs/usr/ports/biology/seaview/work/seaview/Makefile
===========================================================================
=======================<phase: build-depends  >============================
===>   seaview-5.0.4,1 depends on package: gmake>=4.3 - not found
===>   Installing existing package /packages/All/gmake-4.3_2.txz
[130releng-amd64-quarterly-job-14] Installing gmake-4.3_2...
[130releng-amd64-quarterly-job-14] `-- Installing gettext-runtime-0.21...
[130releng-amd64-quarterly-job-14] |   `-- Installing indexinfo-0.3.1...
[130releng-amd64-quarterly-job-14] |   `-- Extracting indexinfo-0.3.1: .... done
[130releng-amd64-quarterly-job-14] `-- Extracting gettext-runtime-0.21: .......... done
[130releng-amd64-quarterly-job-14] Extracting gmake-4.3_2: .......... done
===>   seaview-5.0.4,1 depends on package: gmake>=4.3 - found
===>   Returning to build of seaview-5.0.4,1
===>   seaview-5.0.4,1 depends on file: /usr/local/libdata/pkgconfig/x11.pc - not found
===>   Installing existing package /packages/All/libX11-1.6.12,1.txz
[130releng-amd64-quarterly-job-14] Installing libX11-1.6.12,1...
[130releng-amd64-quarterly-job-14] `-- Installing libxcb-1.14_1...
[130releng-amd64-quarterly-job-14] |   `-- Installing libXau-1.0.9...
[130releng-amd64-quarterly-job-14] |   `-- Extracting libXau-1.0.9: .......... done
[130releng-amd64-quarterly-job-14] |   `-- Installing libXdmcp-1.1.3...
<snip>
[130releng-amd64-quarterly-job-14] |   |   `-- Extracting libpciaccess-0.16: ......... done
[130releng-amd64-quarterly-job-14] |   |   `-- Installing libxml2-2.9.10_2...
[130releng-amd64-quarterly-job-14] |   |   `-- Extracting libxml2-2.9.10_2: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Extracting libdrm-2.4.103,1: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Installing libunwind-20200331_1...
[130releng-amd64-quarterly-job-14] |   | `-- Extracting libunwind-20200331_1: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Installing libxshmfence-1.3...
[130releng-amd64-quarterly-job-14] |   | `-- Extracting libxshmfence-1.3: ......... done
[130releng-amd64-quarterly-job-14] |   | `-- Installing wayland-1.18.0_4...
[130releng-amd64-quarterly-job-14] |   |   `-- Installing libepoll-shim-0.0.20200602...
[130releng-amd64-quarterly-job-14] |   |   `-- Extracting libepoll-shim-0.0.20200602: .......... done
[130releng-amd64-quarterly-job-14] |   |   `-- Installing libffi-3.3_1...
[130releng-amd64-quarterly-job-14] |   |   `-- Extracting libffi-3.3_1: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Extracting wayland-1.18.0_4: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Installing zstd-1.4.5_1...
[130releng-amd64-quarterly-job-14] |   |   `-- Installing liblz4-1.9.3,1...
[130releng-amd64-quarterly-job-14] |   |   `-- Extracting liblz4-1.9.3,1: .......... done
[130releng-amd64-quarterly-job-14] |   | `-- Extracting zstd-1.4.5_1: .......... done
[130releng-amd64-quarterly-job-14] |   `-- Extracting mesa-libs-20.2.3: .......... done
[130releng-amd64-quarterly-job-14] `-- Extracting libGLU-9.0.1: ...... done
[130releng-amd64-quarterly-job-14] Extracting fltk-1.3.5: .......... done
===>   seaview-5.0.4,1 depends on shared library: libfltk.so - found (/usr/local/lib/libfltk.so)
===>   Returning to build of seaview-5.0.4,1
===>   seaview-5.0.4,1 depends on shared library: libfontconfig.so - found (/usr/local/lib/libfontconfig.so)
===>   seaview-5.0.4,1 depends on shared library: libpng.so - found (/usr/local/lib/libpng.so)
===>   seaview-5.0.4,1 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for seaview-5.0.4,1
===========================================================================
=======================<phase: build          >============================
===>  Building for seaview-5.0.4,1
gmake[1]: Entering directory '/wrkdirs/usr/ports/biology/seaview/work/seaview'
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF seaview.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF custom.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF use_mase_files.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF regions.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF load_seq.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF align.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF xfmatpt.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF comlines.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF resource.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF nexus.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF viewasprots.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF racnuc_fetch.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF concatenate.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF statistics.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF trees.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treedraw.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF addbootstrap.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF least_squares_brl.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pseudoterminal.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF unrooted.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF pdf_or_ps.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF svg.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF threads.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF tbe.cxx
c++ -c   -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF treerecs_draw.cxx
c++ -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -I. -I/usr/local/include -Icsrc  -DDEFAULT_HELPFILE=\"/usr/local/share/seaview/seaview.html\" -DPHYMLNAME=\"phyml\" -DNO_PDF FL/Fl_SVG_Image.cxx
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/raa_acnuc.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/parser.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/md5.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/zsockr.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/misc_acnuc.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/dnapars.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/protpars.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/seq.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/phylip.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/lwl.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/bionj.c
cc -c  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -O2 -pipe  -fstack-protector-strong -fno-strict-aliasing  -Dunix -Icsrc csrc/phyml_util.c
c++ -o seaview   -fstack-protector-strong  seaview.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o resource.o nexus.o viewasprots.o racnuc_fetch.o concatenate.o statistics.o trees.o treedraw.o addbootstrap.o least_squares_brl.o pseudoterminal.o unrooted.o pdf_or_ps.o svg.o threads.o tbe.o treerecs_draw.o Fl_SVG_Image.o raa_acnuc.o parser.o md5.o zsockr.o misc_acnuc.o dnapars.o protpars.o seq.o phylip.o lwl.o bionj.o phyml_util.o  `fltk-config --use-images --ldflags` -lpthread -lz 
ld: error: duplicate symbol: progname
>>> defined at seaview.cxx
>>>            seaview.o:(progname)
>>> defined at dnapars.c
>>>            dnapars.o:(.bss+0x190)

ld: error: duplicate symbol: ancseq
>>> defined at dnapars.c
>>>            dnapars.o:(ancseq)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x7B6)

ld: error: duplicate symbol: bestrees
>>> defined at dnapars.c
>>>            dnapars.o:(bestrees)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x810)

ld: error: duplicate symbol: chars
>>> defined at dnapars.c
>>>            dnapars.o:(chars)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x3C8)

ld: error: duplicate symbol: col
>>> defined at dnapars.c
>>>            dnapars.o:(col)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x798)

ld: error: duplicate symbol: enterorder
>>> defined at dnapars.c
>>>            dnapars.o:(enterorder)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x800)

ld: error: duplicate symbol: firstplotblock
>>> defined at dnapars.c
>>>            dnapars.o:(firstplotblock)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x459)

ld: error: duplicate symbol: firstset
>>> defined at dnapars.c
>>>            dnapars.o:(firstset)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x418)

ld: error: duplicate symbol: fsteps
>>> defined at dnapars.c
>>>            dnapars.o:(fsteps)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x808)

ld: error: duplicate symbol: garbage
>>> defined at dnapars.c
>>>            dnapars.o:(garbage)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x400)

ld: error: duplicate symbol: infilename
>>> defined at dnapars.c
>>>            dnapars.o:(infilename)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x460)

ld: error: duplicate symbol: inseed
>>> defined at dnapars.c
>>>            dnapars.o:(inseed)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x7A0)

ld: error: duplicate symbol: inseed0
>>> defined at dnapars.c
>>>            dnapars.o:(inseed0)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x7A8)

ld: error: duplicate symbol: intreename
>>> defined at dnapars.c
>>>            dnapars.o:(intreename)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x600)

ld: error: duplicate symbol: ith
>>> defined at dnapars.c
>>>            dnapars.o:(ith)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x438)

ld: error: duplicate symbol: javarun
>>> defined at dnapars.c
>>>            dnapars.o:(javarun)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x458)

ld: error: duplicate symbol: jumb
>>> defined at dnapars.c
>>>            dnapars.o:(jumb)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x440)

ld: error: duplicate symbol: jumble
>>> defined at dnapars.c
>>>            dnapars.o:(jumble)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x428)

ld: error: duplicate symbol: justwts
>>> defined at dnapars.c
>>>            dnapars.o:(justwts)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x7B5)

ld: error: duplicate symbol: lastrearr
>>> defined at dnapars.c
>>>            dnapars.o:(lastrearr)
>>> defined at protpars.c
>>>            protpars.o:(.bss+0x840)

ld: error: too many errors emitted, stopping now (use -error-limit=0 to see all errors)
c++: error: linker command failed with exit code 1 (use -v to see invocation)
gmake[1]: *** [Makefile:46: seaview] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/seaview/work/seaview'
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/seaview



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