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Date:      Wed, 01 Apr 2020 16:23:25 +0000
From:      bugzilla-noreply@freebsd.org
To:        ports-bugs@FreeBSD.org
Subject:   [Bug 245240] biology/kallisto: fix build on GCC architectures
Message-ID:  <bug-245240-7788@https.bugs.freebsd.org/bugzilla/>

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https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D245240

            Bug ID: 245240
           Summary: biology/kallisto: fix build on GCC architectures
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: jwb@freebsd.org
          Reporter: pkubaj@FreeBSD.org
             Flags: maintainer-feedback?(jwb@freebsd.org)
          Assignee: jwb@freebsd.org

kallisto 0.46.2 fails to build with GCC:
In file included from
/wrkdirs/usr/ports/biology/kallisto/work/kallisto-0.46.2/src/Bootstrap.cpp:=
1:
/wrkdirs/usr/ports/biology/kallisto/work/kallisto-0.46.2/src/Bootstrap.h:57=
:106:
error: 'uint' has not been declared
   57 |       const std::vector<int>& fld, const std::vector<int>& preBias,
const std::vector<double>& postBias, uint compression, size_t index_version,
      |=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=
=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=
=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20=20
                                 ^~~~


Including sys/types.h is necessary.
Please MFH after commit since new quarterly is imminent.

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